RNA–Protein interactions for RNA: ENST00000617087.1

PVT1-225, Transcript of Pvt1 oncogene, humanhuman

Gene PVT1, Length 130 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-225ENST00000617087 C2CD2LO14523 706 aa8.39□□□□□ -1.07
PVT1-225ENST00000617087 PAGE1O75459 146 aa8.39□□□□□ -1.07
PVT1-225ENST00000617087 GHRHP01286 108 aa8.39□□□□□ -1.07
PVT1-225ENST00000617087 TFE3P19532 575 aaPredicted RBP8.39□□□□□ -1.07
PVT1-225ENST00000617087 SOX9P48436 509 aa8.39□□□□□ -1.07
PVT1-225ENST00000617087 NASPP49321 788 aaPredicted RBP8.39□□□□□ -1.07
PVT1-225ENST00000617087 MUC3BQ9H195 1237 aa8.39□□□□□ -1.07
PVT1-225ENST00000617087 EFR3BQ9Y2G0 817 aa8.39□□□□□ -1.07
PVT1-225ENST00000617087 GPR25O00155 361 aa8.38□□□□□ -1.07
PVT1-225ENST00000617087 PPFIA3O75145 1194 aa8.38□□□□□ -1.07
PVT1-225ENST00000617087 BSNDQ8WZ55 320 aa8.38□□□□□ -1.07
PVT1-225ENST00000617087 UBE2OQ9C0C9 1292 aaKnown RBP8.38□□□□□ -1.07
PVT1-225ENST00000617087 RBSNQ9H1K0 784 aa8.38□□□□□ -1.07
PVT1-225ENST00000617087 IGFLR1Q9H665 355 aa8.38□□□□□ -1.07
PVT1-225ENST00000617087 TMEM39AQ9NV64 488 aa8.38□□□□□ -1.07
PVT1-225ENST00000617087 GMPR2Q9P2T1 348 aaKnown RBP8.38□□□□□ -1.07
PVT1-225ENST00000617087 SMNDC1O75940 238 aaKnown RBP eCLIP8.37□□□□□ -1.07
PVT1-225ENST00000617087 SSBP05455 408 aaKnown RBP eCLIP8.37□□□□□ -1.07
PVT1-225ENST00000617087 SNAP47Q5SQN1 464 aa8.37□□□□□ -1.07
PVT1-225ENST00000617087 PCNX4Q63HM2 1172 aa8.37□□□□□ -1.07
PVT1-225ENST00000617087 SLITRK4Q8IW52 837 aa8.37□□□□□ -1.07
PVT1-225ENST00000617087 VWA5B2Q8N398 1253 aa8.37□□□□□ -1.07
PVT1-225ENST00000617087 GOLM1Q8NBJ4 401 aa8.37□□□□□ -1.07
PVT1-225ENST00000617087 NANOS1Q8WY41 292 aaKnown RBP8.37□□□□□ -1.07
PVT1-225ENST00000617087 TNFRSF25Q93038 417 aa8.37□□□□□ -1.07
PVT1-225ENST00000617087 OSBPL2Q9H1P3 480 aa8.37□□□□□ -1.07
PVT1-225ENST00000617087 CLEC4MQ9H2X3 399 aaPredicted RBP8.37□□□□□ -1.07
PVT1-225ENST00000617087 PIF1Q9H611 641 aa8.37□□□□□ -1.07
PVT1-225ENST00000617087 AVENQ9NQS1 362 aaPredicted RBP8.37□□□□□ -1.07
PVT1-225ENST00000617087 UBP1Q9NZI7 540 aa8.37□□□□□ -1.07
PVT1-225ENST00000617087 GPN3Q9UHW5 284 aaPredicted RBP8.37□□□□□ -1.07
PVT1-225ENST00000617087 STRIP2Q9ULQ0 834 aa8.37□□□□□ -1.07
PVT1-225ENST00000617087 SNRPBP14678 240 aaKnown RBP8.36□□□□□ -1.07
PVT1-225ENST00000617087 EIF2AK2P19525 551 aaKnown RBP8.36□□□□□ -1.07
PVT1-225ENST00000617087 BMP6P22004 513 aa8.36□□□□□ -1.07
PVT1-225ENST00000617087 NFX1Q12986 1120 aaKnown RBP8.36□□□□□ -1.07
PVT1-225ENST00000617087 NBPF6Q5VWK0 638 aa8.36□□□□□ -1.07
PVT1-225ENST00000617087 CEP135Q66GS9 1140 aa8.36□□□□□ -1.07
PVT1-225ENST00000617087 FAM196AQ6ZSG2 479 aa8.36□□□□□ -1.07
PVT1-225ENST00000617087 SV2AQ7L0J3 742 aa8.36□□□□□ -1.07
PVT1-225ENST00000617087 CCDC84Q86UT8 332 aaPredicted RBP8.36□□□□□ -1.07
PVT1-225ENST00000617087 TRIM42Q8IWZ5 723 aa8.36□□□□□ -1.07
PVT1-225ENST00000617087 CKAP2LQ8IYA6 745 aa8.36□□□□□ -1.07
PVT1-225ENST00000617087 NBPF4Q96M43 638 aa8.36□□□□□ -1.07
PVT1-225ENST00000617087 ZNF408Q9H9D4 720 aa8.36□□□□□ -1.07
PVT1-225ENST00000617087 KLF15Q9UIH9 416 aa8.36□□□□□ -1.07
PVT1-225ENST00000617087 ROBO2Q9HCK4 1378 aa8.35□□□□□ -1.07
PVT1-225ENST00000617087 TLDC2A0PJX2 215 aa8.35□□□□□ -1.07
PVT1-225ENST00000617087 CDC14CA4D256 554 aa8.35□□□□□ -1.07
PVT1-225ENST00000617087 CRKP46108 304 aa8.35□□□□□ -1.07
PVT1-225ENST00000617087 PPP2R3AQ06190 1150 aa8.35□□□□□ -1.07
PVT1-225ENST00000617087 ADAMTSL4Q6UY14 1074 aa8.35□□□□□ -1.07
PVT1-225ENST00000617087 FAM35AQ86V20 835 aa8.35□□□□□ -1.07
PVT1-225ENST00000617087 NKD1Q969G9 470 aa8.35□□□□□ -1.07
PVT1-225ENST00000617087 PLD4Q96BZ4 506 aa8.35□□□□□ -1.07
PVT1-225ENST00000617087 ADAM19Q9H013 955 aa8.35□□□□□ -1.07
PVT1-225ENST00000617087 ZSWIM4Q9H7M6 989 aa8.35□□□□□ -1.07
PVT1-225ENST00000617087 SLC6A14Q9UN76 642 aa8.35□□□□□ -1.07
PVT1-225ENST00000617087 SOX13Q9UN79 622 aa8.35□□□□□ -1.07
PVT1-225ENST00000617087 B3GALT4O96024 378 aa8.34□□□□□ -1.07
PVT1-225ENST00000617087 BMP4P12644 408 aa8.34□□□□□ -1.07
PVT1-225ENST00000617087 CPB1P15086 417 aa8.34□□□□□ -1.07
PVT1-225ENST00000617087 ETFBP38117 255 aa8.34□□□□□ -1.07
PVT1-225ENST00000617087 ZNF157P51786 506 aaPredicted RBP8.34□□□□□ -1.07
PVT1-225ENST00000617087 PCBP4P57723 403 aaKnown RBP8.34□□□□□ -1.07
PVT1-225ENST00000617087 PCDH1Q08174 1060 aa8.34□□□□□ -1.07
PVT1-225ENST00000617087 TBC1D8BQ0IIM8 1120 aa8.34□□□□□ -1.07
PVT1-225ENST00000617087 ZNF423Q2M1K9 1284 aa8.34□□□□□ -1.07
PVT1-225ENST00000617087 PERM1Q5SV97 790 aa8.34□□□□□ -1.07
PVT1-225ENST00000617087 RASIP1Q5U651 963 aa8.34□□□□□ -1.07
PVT1-225ENST00000617087 VN1R5Q7Z5H4 357 aa8.34□□□□□ -1.07
PVT1-225ENST00000617087 MDFIQ99750 246 aa8.34□□□□□ -1.07
PVT1-225ENST00000617087 LRRC3Q9BY71 257 aa8.34□□□□□ -1.07
PVT1-225ENST00000617087 CYP8B1Q9UNU6 501 aa8.34□□□□□ -1.07
PVT1-225ENST00000617087 SAMM50Q9Y512 469 aa8.34□□□□□ -1.07
PVT1-225ENST00000617087 PCDHB5Q9Y5E4 795 aa8.34□□□□□ -1.07
PVT1-225ENST00000617087 ADARB2-AS1A8MUL3 147 aa8.33□□□□□ -1.08
PVT1-225ENST00000617087 NME2P22392 152 aa8.33□□□□□ -1.08
PVT1-225ENST00000617087 APOBRQ0VD83 1088 aa8.33□□□□□ -1.08
PVT1-225ENST00000617087 SERINC3Q13530 473 aa8.33□□□□□ -1.08
PVT1-225ENST00000617087 BNC2Q6ZN30 1099 aaPredicted RBP8.33□□□□□ -1.08
PVT1-225ENST00000617087 GATAD2BQ8WXI9 593 aa8.33□□□□□ -1.08
PVT1-225ENST00000617087 TMA7Q9Y2S6 64 aaKnown RBP8.33□□□□□ -1.08
PVT1-225ENST00000617087 FAM221AA4D161 298 aa8.32□□□□□ -1.08
PVT1-225ENST00000617087 F13A1P00488 732 aa8.32□□□□□ -1.08
PVT1-225ENST00000617087 ARAFP10398 606 aa8.32□□□□□ -1.08
PVT1-225ENST00000617087 PTPRAP18433 802 aa8.32□□□□□ -1.08
PVT1-225ENST00000617087 MICALL1Q8N3F8 863 aa8.32□□□□□ -1.08
PVT1-225ENST00000617087 TTC9Q92623 222 aa8.32□□□□□ -1.08
PVT1-225ENST00000617087 LPIN3Q9BQK8 851 aa8.32□□□□□ -1.08
PVT1-225ENST00000617087 SMG9Q9H0W8 520 aaKnown RBP8.32□□□□□ -1.08
PVT1-225ENST00000617087 FRRS1LQ9P0K9 344 aa8.32□□□□□ -1.08
PVT1-225ENST00000617087 NAGPAQ9UK23 515 aa8.32□□□□□ -1.08
PVT1-225ENST00000617087 MRVI1Q9Y6F6 885 aa8.32□□□□□ -1.08
PVT1-225ENST00000617087 KLF4O43474 513 aa8.31□□□□□ -1.08
PVT1-225ENST00000617087 HMGB1P09429 215 aaKnown RBP8.31□□□□□ -1.08
PVT1-225ENST00000617087 ESRRAP11474 423 aaPredicted RBP8.31□□□□□ -1.08
PVT1-225ENST00000617087 HSP90B1P14625 803 aaKnown RBP8.31□□□□□ -1.08
PVT1-225ENST00000617087 ADH7P40394 386 aa8.31□□□□□ -1.08
PVT1-225ENST00000617087 LRRC14Q15048 493 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms