RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 FSD1Q9BTV5 496 aa10.46□□□□□ -0.73
COL12A1-211ENST00000615798 FAM160A1Q05DH4 1040 aa10.46□□□□□ -0.74
COL12A1-211ENST00000615798 BAG1Q99933 345 aaPredicted RBP10.46□□□□□ -0.74
COL12A1-211ENST00000615798 KDM5CP41229 1560 aa10.46□□□□□ -0.74
COL12A1-211ENST00000615798 NLRP6P59044 892 aa10.46□□□□□ -0.74
COL12A1-211ENST00000615798 TRIM22Q8IYM9 498 aa10.46□□□□□ -0.74
COL12A1-211ENST00000615798 ZHX3Q9H4I2 956 aa10.46□□□□□ -0.74
COL12A1-211ENST00000615798 UTP6Q9NYH9 597 aaKnown RBP10.46□□□□□ -0.74
COL12A1-211ENST00000615798 MSH5O43196 834 aa10.46□□□□□ -0.74
COL12A1-211ENST00000615798 GRAMD4Q6IC98 578 aa10.46□□□□□ -0.74
COL12A1-211ENST00000615798 ACTN2P35609 894 aa10.46□□□□□ -0.74
COL12A1-211ENST00000615798 PRPHP41219 470 aa10.46□□□□□ -0.74
COL12A1-211ENST00000615798 ESRRGP62508 458 aa10.46□□□□□ -0.74
COL12A1-211ENST00000615798 SSH1Q8WYL5 1049 aa10.46□□□□□ -0.74
COL12A1-211ENST00000615798 ATG3Q9NT62 314 aa10.46□□□□□ -0.74
COL12A1-211ENST00000615798 AEBP2Q6ZN18 517 aaPredicted RBP10.45□□□□□ -0.74
COL12A1-211ENST00000615798 FLCNQ8NFG4 579 aa10.45□□□□□ -0.74
COL12A1-211ENST00000615798 MAK16Q9BXY0 300 aaKnown RBP10.45□□□□□ -0.74
COL12A1-211ENST00000615798 COPG1Q9Y678 874 aaKnown RBP10.45□□□□□ -0.74
COL12A1-211ENST00000615798 SH3BP5O60239 455 aa10.45□□□□□ -0.74
COL12A1-211ENST00000615798 PPFIA1Q13136 1202 aa10.45□□□□□ -0.74
COL12A1-211ENST00000615798 NBPF6Q5VWK0 638 aa10.45□□□□□ -0.74
COL12A1-211ENST00000615798 NBPF5PQ86XG9 351 aaPredicted RBP10.45□□□□□ -0.74
COL12A1-211ENST00000615798 NBPF4Q96M43 638 aa10.45□□□□□ -0.74
COL12A1-211ENST00000615798 TARBP1Q13395 1621 aaKnown RBP10.45□□□□□ -0.74
COL12A1-211ENST00000615798 ZFYVE1Q9HBF4 777 aa10.45□□□□□ -0.74
COL12A1-211ENST00000615798 ARIH1Q9Y4X5 557 aaPredicted RBP10.45□□□□□ -0.74
COL12A1-211ENST00000615798 TBC1D2BQ9UPU7 963 aa10.45□□□□□ -0.74
COL12A1-211ENST00000615798 MX1P20591 662 aa10.45□□□□□ -0.74
COL12A1-211ENST00000615798 KRT7P08729 469 aa10.45□□□□□ -0.74
COL12A1-211ENST00000615798 TRIM27P14373 513 aa10.45□□□□□ -0.74
COL12A1-211ENST00000615798 ANGPT1Q15389 498 aa10.45□□□□□ -0.74
COL12A1-211ENST00000615798 CLASP1Q7Z460 1538 aa10.45□□□□□ -0.74
COL12A1-211ENST00000615798 TESK2Q96S53 571 aa10.45□□□□□ -0.74
COL12A1-211ENST00000615798 ADCY5O95622 1261 aa10.45□□□□□ -0.74
COL12A1-211ENST00000615798 ADCY10Q96PN6 1610 aa10.45□□□□□ -0.74
COL12A1-211ENST00000615798 RIC3Q7Z5B4 369 aa10.45□□□□□ -0.74
COL12A1-211ENST00000615798 AFAP1L2Q8N4X5 818 aa10.45□□□□□ -0.74
COL12A1-211ENST00000615798 TTC21AQ8NDW8 1320 aa10.45□□□□□ -0.74
COL12A1-211ENST00000615798 FAM69CQ0P6D2 419 aa10.44□□□□□ -0.74
COL12A1-211ENST00000615798 CCDC63Q8NA47 563 aa10.44□□□□□ -0.74
COL12A1-211ENST00000615798 TSR2Q969E8 191 aaKnown RBP10.44□□□□□ -0.74
COL12A1-211ENST00000615798 SH3GL3Q99963 347 aa10.44□□□□□ -0.74
COL12A1-211ENST00000615798 KIF24Q5T7B8 1368 aa10.44□□□□□ -0.74
COL12A1-211ENST00000615798 CCDC14Q49A88 953 aa10.44□□□□□ -0.74
COL12A1-211ENST00000615798 TSC22D3Q99576 134 aa10.44□□□□□ -0.74
COL12A1-211ENST00000615798 SHROOM2Q13796 1616 aa10.44□□□□□ -0.74
COL12A1-211ENST00000615798 SDCCAG8Q86SQ7 713 aaPredicted RBP10.44□□□□□ -0.74
COL12A1-211ENST00000615798 PNMA8AQ86V59 439 aaPredicted RBP10.44□□□□□ -0.74
COL12A1-211ENST00000615798 NMIQ13287 307 aaPredicted RBP10.44□□□□□ -0.74
COL12A1-211ENST00000615798 CA8P35219 290 aa10.44□□□□□ -0.74
COL12A1-211ENST00000615798 ENAHQ8N8S7 591 aaPredicted RBP10.44□□□□□ -0.74
COL12A1-211ENST00000615798 MPHOSPH6Q99547 160 aaKnown RBP10.44□□□□□ -0.74
COL12A1-211ENST00000615798 EIF2S2P20042 333 aaKnown RBP10.44□□□□□ -0.74
COL12A1-211ENST00000615798 TMC6Q7Z403 805 aa10.44□□□□□ -0.74
COL12A1-211ENST00000615798 WASF1Q92558 559 aa10.44□□□□□ -0.74
COL12A1-211ENST00000615798 GNAT3A8MTJ3 354 aa10.44□□□□□ -0.74
COL12A1-211ENST00000615798 ATP2B1P20020 1258 aa10.44□□□□□ -0.74
COL12A1-211ENST00000615798 HEATR3Q7Z4Q2 680 aa10.44□□□□□ -0.74
COL12A1-211ENST00000615798 VPS37DQ86XT2 251 aa10.44□□□□□ -0.74
COL12A1-211ENST00000615798 CERS3Q8IU89 383 aa10.44□□□□□ -0.74
COL12A1-211ENST00000615798 TTC37Q6PGP7 1564 aa10.44□□□□□ -0.74
COL12A1-211ENST00000615798 APOEP02649 317 aa10.43□□□□□ -0.74
COL12A1-211ENST00000615798 PRPF4BQ13523 1007 aaKnown RBP10.43□□□□□ -0.74
COL12A1-211ENST00000615798 GFM2Q969S9 779 aaKnown RBP10.43□□□□□ -0.74
COL12A1-211ENST00000615798 BABAM1Q9NWV8 329 aa10.43□□□□□ -0.74
COL12A1-211ENST00000615798 CROCCQ5TZA2 2017 aa10.43□□□□□ -0.74
COL12A1-211ENST00000615798 CAMK4Q16566 473 aa10.43□□□□□ -0.74
COL12A1-211ENST00000615798 WBP4O75554 376 aaKnown RBP10.43□□□□□ -0.74
COL12A1-211ENST00000615798 TBC1D2Q9BYX2 928 aa10.43□□□□□ -0.74
COL12A1-211ENST00000615798 PER1O15534 1290 aaPredicted RBP10.43□□□□□ -0.74
COL12A1-211ENST00000615798 POLD1P28340 1107 aa10.43□□□□□ -0.74
COL12A1-211ENST00000615798 MRPL46Q9H2W6 279 aaKnown RBP10.43□□□□□ -0.74
COL12A1-211ENST00000615798 NOP2P46087 812 aaKnown RBP10.43□□□□□ -0.74
COL12A1-211ENST00000615798 MYSM1Q5VVJ2 828 aa10.43□□□□□ -0.74
COL12A1-211ENST00000615798 MSANTD4Q8NCY6 345 aa10.43□□□□□ -0.74
COL12A1-211ENST00000615798 DNA2P51530 1060 aa10.43□□□□□ -0.74
COL12A1-211ENST00000615798 SULT6B1Q6IMI4 303 aa10.43□□□□□ -0.74
COL12A1-211ENST00000615798 PIBF1Q8WXW3 757 aa10.43□□□□□ -0.74
COL12A1-211ENST00000615798 KCNK9Q9NPC2 374 aa10.43□□□□□ -0.74
COL12A1-211ENST00000615798 HMG20BQ9P0W2 317 aa10.43□□□□□ -0.74
COL12A1-211ENST00000615798 NOLC1Q14978 699 aaKnown RBP eCLIP10.43□□□□□ -0.74
COL12A1-211ENST00000615798 LARP1BQ659C4 914 aaKnown RBP10.43□□□□□ -0.74
COL12A1-211ENST00000615798 CCDC125Q86Z20 511 aa10.43□□□□□ -0.74
COL12A1-211ENST00000615798 GTF3C6Q969F1 213 aa10.43□□□□□ -0.74
COL12A1-211ENST00000615798 NEK1Q96PY6 1258 aa10.43□□□□□ -0.74
COL12A1-211ENST00000615798 BAZ2BQ9UIF8 2168 aaKnown RBP10.43□□□□□ -0.74
COL12A1-211ENST00000615798 ATP7AQ04656 1500 aa10.43□□□□□ -0.74
COL12A1-211ENST00000615798 IRX1P78414 480 aaPredicted RBP10.43□□□□□ -0.74
COL12A1-211ENST00000615798 NDC80O14777 642 aa10.42□□□□□ -0.74
COL12A1-211ENST00000615798 BLOC1S2Q6QNY1 142 aa10.42□□□□□ -0.74
COL12A1-211ENST00000615798 CAPN7Q9Y6W3 813 aa10.42□□□□□ -0.74
COL12A1-211ENST00000615798 MATR3P43243 847 aaKnown RBP eCLIP10.42□□□□□ -0.74
COL12A1-211ENST00000615798 CCT6BQ92526 530 aa10.42□□□□□ -0.74
COL12A1-211ENST00000615798 MRPS9P82933 396 aaKnown RBP10.42□□□□□ -0.74
COL12A1-211ENST00000615798 KIAA2013Q8IYS2 634 aa10.42□□□□□ -0.74
COL12A1-211ENST00000615798 NRBF2Q96F24 287 aa10.42□□□□□ -0.74
COL12A1-211ENST00000615798 SCHIP1Q9P0W5 487 aaPredicted RBP10.42□□□□□ -0.74
COL12A1-211ENST00000615798 ATP10AO60312 1499 aa10.42□□□□□ -0.74
COL12A1-211ENST00000615798 SH3GL2Q99962 352 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms