RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 TRIM21P19474 475 aaKnown RBP10.88□□□□□ -0.67
CLTCL1-208ENST00000615606 CALML3P27482 149 aa10.88□□□□□ -0.67
CLTCL1-208ENST00000615606 NAPAP54920 295 aa10.88□□□□□ -0.67
CLTCL1-208ENST00000615606 ERMNQ8TAM6 284 aa10.88□□□□□ -0.67
CLTCL1-208ENST00000615606 PIGBQ92521 554 aa10.88□□□□□ -0.67
CLTCL1-208ENST00000615606 LRRC27Q9C0I9 530 aa10.88□□□□□ -0.67
CLTCL1-208ENST00000615606 DEF6Q9H4E7 631 aa10.88□□□□□ -0.67
CLTCL1-208ENST00000615606 C6orf50Q9HD87 102 aa10.88□□□□□ -0.67
CLTCL1-208ENST00000615606 ANO10Q9NW15 660 aa10.88□□□□□ -0.67
CLTCL1-208ENST00000615606 FGFR1OPO95684 399 aaKnown RBP10.88□□□□□ -0.67
CLTCL1-208ENST00000615606 RDXP35241 583 aaKnown RBP10.88□□□□□ -0.67
CLTCL1-208ENST00000615606 CNNM3Q8NE01 707 aa10.88□□□□□ -0.67
CLTCL1-208ENST00000615606 SSH3Q8TE77 659 aa10.88□□□□□ -0.67
CLTCL1-208ENST00000615606 DNAI2Q9GZS0 605 aa10.88□□□□□ -0.67
CLTCL1-208ENST00000615606 GPS2Q13227 327 aa10.88□□□□□ -0.67
CLTCL1-208ENST00000615606 NECAB1Q8N987 351 aa10.88□□□□□ -0.67
CLTCL1-208ENST00000615606 SMARCC2Q8TAQ2 1214 aa10.88□□□□□ -0.67
CLTCL1-208ENST00000615606 PALLDQ8WX93 1383 aa10.88□□□□□ -0.67
CLTCL1-208ENST00000615606 ERVV-1B6SEH8 477 aa10.88□□□□□ -0.67
CLTCL1-208ENST00000615606 CCDC183Q5T5S1 534 aa10.88□□□□□ -0.67
CLTCL1-208ENST00000615606 TMC4Q7Z404 712 aa10.88□□□□□ -0.67
CLTCL1-208ENST00000615606 FSIP1Q8NA03 581 aa10.88□□□□□ -0.67
CLTCL1-208ENST00000615606 MNS1Q8NEH6 495 aa10.88□□□□□ -0.67
CLTCL1-208ENST00000615606 BCS1LQ9Y276 419 aa10.88□□□□□ -0.67
CLTCL1-208ENST00000615606 FAM182BQ5T319 152 aa10.87□□□□□ -0.67
CLTCL1-208ENST00000615606 DDX19AQ9NUU7 478 aaKnown RBP10.87□□□□□ -0.67
CLTCL1-208ENST00000615606 KIDINS220Q9ULH0 1771 aa10.87□□□□□ -0.67
CLTCL1-208ENST00000615606 DLC1Q96QB1 1528 aa10.87□□□□□ -0.67
CLTCL1-208ENST00000615606 ARMT1Q9H993 441 aa10.87□□□□□ -0.67
CLTCL1-208ENST00000615606 RBM28Q9NW13 759 aaKnown RBP10.87□□□□□ -0.67
CLTCL1-208ENST00000615606 SAMM50Q9Y512 469 aa10.87□□□□□ -0.67
CLTCL1-208ENST00000615606 RBM6P78332 1123 aaKnown RBP10.87□□□□□ -0.67
CLTCL1-208ENST00000615606 STXBP4Q6ZWJ1 553 aa10.87□□□□□ -0.67
CLTCL1-208ENST00000615606 PICK1Q9NRD5 415 aa10.87□□□□□ -0.67
CLTCL1-208ENST00000615606 SAP30BPQ9UHR5 308 aaKnown RBP10.87□□□□□ -0.67
CLTCL1-208ENST00000615606 GPAA1O43292 621 aa10.87□□□□□ -0.67
CLTCL1-208ENST00000615606 ATP5JP18859 108 aa10.87□□□□□ -0.67
CLTCL1-208ENST00000615606 KANK3Q6NY19 840 aa10.87□□□□□ -0.67
CLTCL1-208ENST00000615606 UBA5Q9GZZ9 404 aa10.86□□□□□ -0.67
CLTCL1-208ENST00000615606 MYCNP04198 464 aaPredicted RBP10.86□□□□□ -0.67
CLTCL1-208ENST00000615606 DLGAP5Q15398 846 aa10.86□□□□□ -0.67
CLTCL1-208ENST00000615606 FAM43AQ8N2R8 423 aa10.86□□□□□ -0.67
CLTCL1-208ENST00000615606 ARHGEF10LQ9HCE6 1279 aa10.86□□□□□ -0.67
CLTCL1-208ENST00000615606 CPSF1Q10570 1443 aaKnown RBP10.86□□□□□ -0.67
CLTCL1-208ENST00000615606 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.86□□□□□ -0.67
CLTCL1-208ENST00000615606 SERPINB2P05120 415 aa10.86□□□□□ -0.67
CLTCL1-208ENST00000615606 EIF5P55010 431 aaKnown RBP10.86□□□□□ -0.67
CLTCL1-208ENST00000615606 CAMK4Q16566 473 aa10.86□□□□□ -0.67
CLTCL1-208ENST00000615606 TMEM87BQ96K49 555 aa10.86□□□□□ -0.67
CLTCL1-208ENST00000615606 TFIP11Q9UBB9 837 aaKnown RBP10.86□□□□□ -0.67
CLTCL1-208ENST00000615606 SPATA31A6Q5VVP1 1343 aa10.86□□□□□ -0.67
CLTCL1-208ENST00000615606 RNF123Q5XPI4 1314 aa10.86□□□□□ -0.67
CLTCL1-208ENST00000615606 ZAP70P43403 619 aa10.86□□□□□ -0.67
CLTCL1-208ENST00000615606 GRM1Q13255 1194 aa10.86□□□□□ -0.67
CLTCL1-208ENST00000615606 PROSER3Q2NL68 480 aa10.86□□□□□ -0.67
CLTCL1-208ENST00000615606 CAGE1Q8TC20 777 aa10.86□□□□□ -0.67
CLTCL1-208ENST00000615606 OVOS2A0A0G2JMS6 1433 aa10.86□□□□□ -0.67
CLTCL1-208ENST00000615606 OVOS2A0A0J9YW53 1432 aa10.86□□□□□ -0.67
CLTCL1-208ENST00000615606 OVOS2Q6IE36 1432 aa10.86□□□□□ -0.67
CLTCL1-208ENST00000615606 H7C1D1 291 aa10.85□□□□□ -0.67
CLTCL1-208ENST00000615606 CYP27B1O15528 508 aa10.85□□□□□ -0.67
CLTCL1-208ENST00000615606 PARP1P09874 1014 aaKnown RBP10.85□□□□□ -0.67
CLTCL1-208ENST00000615606 ZNF853P0CG23 659 aa10.85□□□□□ -0.67
CLTCL1-208ENST00000615606 ZSCAN22P10073 491 aaPredicted RBP10.85□□□□□ -0.67
CLTCL1-208ENST00000615606 GNA11P29992 359 aa10.85□□□□□ -0.67
CLTCL1-208ENST00000615606 TTLL5Q6EMB2 1281 aa10.85□□□□□ -0.67
CLTCL1-208ENST00000615606 RUFY3Q7L099 469 aa10.85□□□□□ -0.67
CLTCL1-208ENST00000615606 SPDYE3A6NKU9 549 aa10.85□□□□□ -0.67
CLTCL1-208ENST00000615606 PPFIA3O75145 1194 aa10.85□□□□□ -0.67
CLTCL1-208ENST00000615606 GPR162Q16538 588 aa10.85□□□□□ -0.67
CLTCL1-208ENST00000615606 NOM1Q5C9Z4 860 aaKnown RBP10.85□□□□□ -0.67
CLTCL1-208ENST00000615606 SNX21Q969T3 373 aa10.85□□□□□ -0.67
CLTCL1-208ENST00000615606 AATFQ9NY61 560 aaKnown RBP eCLIP10.85□□□□□ -0.67
CLTCL1-208ENST00000615606 AXIN2Q9Y2T1 843 aa10.85□□□□□ -0.67
CLTCL1-208ENST00000615606 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.85□□□□□ -0.67
CLTCL1-208ENST00000615606 OTUD7AQ8TE49 926 aaPredicted RBP10.85□□□□□ -0.67
CLTCL1-208ENST00000615606 TNPO1Q92973 898 aaKnown RBP10.85□□□□□ -0.67
CLTCL1-208ENST00000615606 DESP17661 470 aa10.85□□□□□ -0.67
CLTCL1-208ENST00000615606 PLS1Q14651 629 aa10.85□□□□□ -0.67
CLTCL1-208ENST00000615606 QRICH2Q9H0J4 1663 aa10.84□□□□□ -0.67
CLTCL1-208ENST00000615606 GTF2IP78347 998 aa10.84□□□□□ -0.67
CLTCL1-208ENST00000615606 RAB3GAP1Q15042 981 aa10.84□□□□□ -0.67
CLTCL1-208ENST00000615606 MFSD14BQ5SR56 506 aa10.84□□□□□ -0.67
CLTCL1-208ENST00000615606 FKBP15Q5T1M5 1219 aa10.84□□□□□ -0.67
CLTCL1-208ENST00000615606 SPC24Q8NBT2 197 aa10.84□□□□□ -0.67
CLTCL1-208ENST00000615606 TMOD4Q9NZQ9 345 aa10.84□□□□□ -0.67
CLTCL1-208ENST00000615606 CRB1P82279 1406 aa10.84□□□□□ -0.67
CLTCL1-208ENST00000615606 IBTKQ9P2D0 1353 aaPredicted RBP10.84□□□□□ -0.67
CLTCL1-208ENST00000615606 APOBRQ0VD83 1088 aa10.84□□□□□ -0.67
CLTCL1-208ENST00000615606 UBE4AQ14139 1066 aa10.84□□□□□ -0.67
CLTCL1-208ENST00000615606 KCNG4Q8TDN1 519 aa10.84□□□□□ -0.67
CLTCL1-208ENST00000615606 TEKT1Q969V4 418 aa10.84□□□□□ -0.67
CLTCL1-208ENST00000615606 COPRSQ9NQ92 184 aa10.84□□□□□ -0.67
CLTCL1-208ENST00000615606 PIK3C2BO00750 1634 aa10.84□□□□□ -0.67
CLTCL1-208ENST00000615606 ZNF532Q9HCE3 1301 aa10.84□□□□□ -0.67
CLTCL1-208ENST00000615606 IDEP14735 1019 aa10.84□□□□□ -0.67
CLTCL1-208ENST00000615606 CHRNDQ07001 517 aa10.84□□□□□ -0.67
CLTCL1-208ENST00000615606 TNFAIP1Q13829 316 aa10.84□□□□□ -0.67
CLTCL1-208ENST00000615606 KLHL10Q6JEL2 608 aa10.84□□□□□ -0.67
CLTCL1-208ENST00000615606 CCDC129Q6ZRS4 1044 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms