RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 HSP90B1P14625 803 aaKnown RBP22.71■■□□□ 1.23
MMP28-204ENST00000615136 SYT1P21579 422 aa22.71■■□□□ 1.23
MMP28-204ENST00000615136 SLC9C2Q5TAH2 1124 aa22.71■■□□□ 1.23
MMP28-204ENST00000615136 COL24A1Q17RW2 1714 aa22.71■■□□□ 1.23
MMP28-204ENST00000615136 C4AP0C0L4 1744 aa22.71■■□□□ 1.23
MMP28-204ENST00000615136 ZPR1O75312 459 aa22.7■■□□□ 1.23
MMP28-204ENST00000615136 UQCRFS1P1P0C7P4 283 aa22.7■■□□□ 1.23
MMP28-204ENST00000615136 STK3Q13188 491 aa22.7■■□□□ 1.23
MMP28-204ENST00000615136 Q6ZUG5 572 aa22.7■■□□□ 1.23
MMP28-204ENST00000615136 A0A1B0GUL6 1792 aa22.7■■□□□ 1.22
MMP28-204ENST00000615136 E7EWF7 191 aa22.7■■□□□ 1.22
MMP28-204ENST00000615136 GPAA1O43292 621 aa22.7■■□□□ 1.22
MMP28-204ENST00000615136 LRRFIP1Q32MZ4 808 aaKnown RBP22.7■■□□□ 1.22
MMP28-204ENST00000615136 SPATA5Q8NB90 893 aa22.7■■□□□ 1.22
MMP28-204ENST00000615136 TMEM87AQ8NBN3 555 aa22.7■■□□□ 1.22
MMP28-204ENST00000615136 CELF1Q92879 486 aaKnown RBP22.7■■□□□ 1.22
MMP28-204ENST00000615136 SETDB2Q96T68 719 aa22.7■■□□□ 1.22
MMP28-204ENST00000615136 GTF2E1P29083 439 aaPredicted RBP22.69■■□□□ 1.22
MMP28-204ENST00000615136 SLC10A5Q5PT55 438 aa22.69■■□□□ 1.22
MMP28-204ENST00000615136 CDC5LQ99459 802 aaKnown RBP22.69■■□□□ 1.22
MMP28-204ENST00000615136 HAND2P61296 217 aa22.69■■□□□ 1.22
MMP28-204ENST00000615136 ANKRD1Q15327 319 aa22.69■■□□□ 1.22
MMP28-204ENST00000615136 LRSAM1Q6UWE0 723 aa22.69■■□□□ 1.22
MMP28-204ENST00000615136 FAM196AQ6ZSG2 479 aa22.69■■□□□ 1.22
MMP28-204ENST00000615136 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.69■■□□□ 1.22
MMP28-204ENST00000615136 ZNF532Q9HCE3 1301 aa22.68■■□□□ 1.22
MMP28-204ENST00000615136 RGL2O15211 777 aa22.68■■□□□ 1.22
MMP28-204ENST00000615136 STX6O43752 255 aa22.68■■□□□ 1.22
MMP28-204ENST00000615136 FGAP02671 866 aa22.68■■□□□ 1.22
MMP28-204ENST00000615136 ZSCAN22P10073 491 aaPredicted RBP22.68■■□□□ 1.22
MMP28-204ENST00000615136 PDE6AP16499 860 aa22.68■■□□□ 1.22
MMP28-204ENST00000615136 CLCN1P35523 988 aa22.68■■□□□ 1.22
MMP28-204ENST00000615136 TTF1Q15361 905 aaPredicted RBP22.68■■□□□ 1.22
MMP28-204ENST00000615136 NBPF5PQ86XG9 351 aaPredicted RBP22.68■■□□□ 1.22
MMP28-204ENST00000615136 TCRBV5S4A2TA0A5A2 114 aa22.67■■□□□ 1.22
MMP28-204ENST00000615136 ANKRD18AQ8IVF6 992 aa22.67■■□□□ 1.22
MMP28-204ENST00000615136 BCL11BQ9C0K0 894 aaPredicted RBP22.67■■□□□ 1.22
MMP28-204ENST00000615136 EXOSC10Q01780 885 aaKnown RBP22.67■■□□□ 1.22
MMP28-204ENST00000615136 CHST3Q7LGC8 479 aa22.67■■□□□ 1.22
MMP28-204ENST00000615136 BRF1Q92994 677 aa22.67■■□□□ 1.22
MMP28-204ENST00000615136 RBSNQ9H1K0 784 aa22.67■■□□□ 1.22
MMP28-204ENST00000615136 ANP32BQ92688 251 aaKnown RBP22.66■■□□□ 1.22
MMP28-204ENST00000615136 TRIM44Q96DX7 344 aaPredicted RBP22.66■■□□□ 1.22
MMP28-204ENST00000615136 IQSEC3Q9UPP2 1182 aaPredicted RBP22.66■■□□□ 1.22
MMP28-204ENST00000615136 BRWD3Q6RI45 1802 aa22.66■■□□□ 1.22
MMP28-204ENST00000615136 DOCK2Q92608 1830 aa22.66■■□□□ 1.22
MMP28-204ENST00000615136 DHX32Q7L7V1 743 aaKnown RBP22.65■■□□□ 1.22
MMP28-204ENST00000615136 MINPP1Q9UNW1 487 aa22.65■■□□□ 1.22
MMP28-204ENST00000615136 UBE3CQ15386 1083 aa22.65■■□□□ 1.22
MMP28-204ENST00000615136 GDPD2Q9HCC8 539 aa22.65■■□□□ 1.22
MMP28-204ENST00000615136 BSDC1Q9NW68 430 aaPredicted RBP22.65■■□□□ 1.22
MMP28-204ENST00000615136 SYCE3A1L190 88 aa22.64■■□□□ 1.22
MMP28-204ENST00000615136 ESPNB1AK53 854 aa22.64■■□□□ 1.22
MMP28-204ENST00000615136 GYG1P46976 350 aa22.64■■□□□ 1.22
MMP28-204ENST00000615136 ZSCAN25Q6NSZ9 544 aa22.64■■□□□ 1.22
MMP28-204ENST00000615136 NYXQ9GZU5 481 aa22.64■■□□□ 1.22
MMP28-204ENST00000615136 MTMR6Q9Y217 621 aa22.64■■□□□ 1.22
MMP28-204ENST00000615136 TNRC6CQ9HCJ0 1690 aaKnown RBP22.64■■□□□ 1.21
MMP28-204ENST00000615136 F13A1P00488 732 aa22.64■■□□□ 1.21
MMP28-204ENST00000615136 RFC4P35249 363 aa22.64■■□□□ 1.21
MMP28-204ENST00000615136 TRAPPC3LQ5T215 181 aa22.64■■□□□ 1.21
MMP28-204ENST00000615136 USP48Q86UV5 1035 aa22.64■■□□□ 1.21
MMP28-204ENST00000615136 SLC51AQ86UW1 340 aa22.64■■□□□ 1.21
MMP28-204ENST00000615136 SYAP1Q96A49 352 aaPredicted RBP22.64■■□□□ 1.21
MMP28-204ENST00000615136 MAGEB6Q8N7X4 407 aa22.63■■□□□ 1.21
MMP28-204ENST00000615136 APOBRQ0VD83 1088 aa22.62■■□□□ 1.21
MMP28-204ENST00000615136 NKX2-3Q8TAU0 364 aa22.62■■□□□ 1.21
MMP28-204ENST00000615136 GTF3C6Q969F1 213 aa22.62■■□□□ 1.21
MMP28-204ENST00000615136 NLRP3Q96P20 1036 aa22.62■■□□□ 1.21
MMP28-204ENST00000615136 NBPF3Q9H094 633 aa22.62■■□□□ 1.21
MMP28-204ENST00000615136 GPHNQ9NQX3 736 aaPredicted RBP22.62■■□□□ 1.21
MMP28-204ENST00000615136 JAK2O60674 1132 aa22.62■■□□□ 1.21
MMP28-204ENST00000615136 HMGB1P09429 215 aaKnown RBP22.62■■□□□ 1.21
MMP28-204ENST00000615136 TPTE2Q6XPS3 522 aa22.62■■□□□ 1.21
MMP28-204ENST00000615136 DENND2AQ9ULE3 1009 aa22.62■■□□□ 1.21
MMP28-204ENST00000615136 ATP6V1DQ9Y5K8 247 aa22.62■■□□□ 1.21
MMP28-204ENST00000615136 COL1A1P02452 1464 aaPredicted RBP22.61■■□□□ 1.21
MMP28-204ENST00000615136 GADD45BO75293 160 aaPredicted RBP22.61■■□□□ 1.21
MMP28-204ENST00000615136 KLRK1P26718 216 aa22.61■■□□□ 1.21
MMP28-204ENST00000615136 TM4SF1P30408 202 aa22.61■■□□□ 1.21
MMP28-204ENST00000615136 NFIXQ14938 502 aa22.61■■□□□ 1.21
MMP28-204ENST00000615136 IMMTQ16891 758 aaKnown RBP22.61■■□□□ 1.21
MMP28-204ENST00000615136 AGXT2Q9BYV1 514 aa22.61■■□□□ 1.21
MMP28-204ENST00000615136 CTNNA3Q9UI47 895 aa22.61■■□□□ 1.21
MMP28-204ENST00000615136 TRIM37O94972 964 aa22.6■■□□□ 1.21
MMP28-204ENST00000615136 SCRN1Q12765 414 aa22.6■■□□□ 1.21
MMP28-204ENST00000615136 ZNF804BA4D1E1 1349 aa22.6■■□□□ 1.21
MMP28-204ENST00000615136 UBR3Q6ZT12 1888 aa22.6■■□□□ 1.21
MMP28-204ENST00000615136 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.6■■□□□ 1.21
MMP28-204ENST00000615136 RPS8P62241 208 aaKnown RBP22.6■■□□□ 1.21
MMP28-204ENST00000615136 FGD1P98174 961 aa22.6■■□□□ 1.21
MMP28-204ENST00000615136 PDLIM2Q96JY6 352 aa22.6■■□□□ 1.21
MMP28-204ENST00000615136 STRBPQ96SI9 672 aaKnown RBP22.6■■□□□ 1.21
MMP28-204ENST00000615136 CNPY2Q9Y2B0 182 aa22.6■■□□□ 1.21
MMP28-204ENST00000615136 VPS37CA5D8V6 355 aaPredicted RBP22.59■■□□□ 1.21
MMP28-204ENST00000615136 MAP3K12Q12852 859 aa22.58■■□□□ 1.21
MMP28-204ENST00000615136 UBE4AQ14139 1066 aa22.58■■□□□ 1.21
MMP28-204ENST00000615136 LARP1BQ659C4 914 aaKnown RBP22.58■■□□□ 1.21
MMP28-204ENST00000615136 KRT27Q7Z3Y8 459 aa22.58■■□□□ 1.21
MMP28-204ENST00000615136 PDIA4P13667 645 aaKnown RBP22.58■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms