RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 CAVIN4Q5BKX8 364 aa20.77■□□□□ 0.91
CBWD3-211ENST00000615061 SSH3Q8TE77 659 aa20.77■□□□□ 0.91
CBWD3-211ENST00000615061 MYO3BQ8WXR4 1341 aa20.76■□□□□ 0.91
CBWD3-211ENST00000615061 MYH13Q9UKX3 1938 aa20.76■□□□□ 0.91
CBWD3-211ENST00000615061 CEP85Q6P2H3 762 aa20.76■□□□□ 0.91
CBWD3-211ENST00000615061 GLIS2Q9BZE0 524 aaPredicted RBP20.76■□□□□ 0.91
CBWD3-211ENST00000615061 MYOZ2Q9NPC6 264 aa20.76■□□□□ 0.91
CBWD3-211ENST00000615061 PGAP2Q9UHJ9 254 aa20.76■□□□□ 0.91
CBWD3-211ENST00000615061 DDX19BQ9UMR2 479 aa20.76■□□□□ 0.91
CBWD3-211ENST00000615061 DLK2Q6UY11 383 aa20.75■□□□□ 0.91
CBWD3-211ENST00000615061 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.75■□□□□ 0.91
CBWD3-211ENST00000615061 ZC3H15Q8WU90 426 aaKnown RBP20.75■□□□□ 0.91
CBWD3-211ENST00000615061 F8W031 263 aaPredicted RBP20.74■□□□□ 0.91
CBWD3-211ENST00000615061 PDE3AQ14432 1141 aa20.74■□□□□ 0.91
CBWD3-211ENST00000615061 FAM205AQ6ZU69 1335 aa20.74■□□□□ 0.91
CBWD3-211ENST00000615061 ADORA1P30542 326 aa20.74■□□□□ 0.91
CBWD3-211ENST00000615061 TIMM10P62072 90 aa20.74■□□□□ 0.91
CBWD3-211ENST00000615061 CHAF1AQ13111 956 aaPredicted RBP20.74■□□□□ 0.91
CBWD3-211ENST00000615061 OGFOD1Q8N543 542 aa20.74■□□□□ 0.91
CBWD3-211ENST00000615061 ZBTB40Q9NUA8 1239 aa20.74■□□□□ 0.91
CBWD3-211ENST00000615061 TRPM7Q96QT4 1865 aa20.73■□□□□ 0.91
CBWD3-211ENST00000615061 ARAP2Q8WZ64 1704 aa20.73■□□□□ 0.91
CBWD3-211ENST00000615061 G3BP1Q13283 466 aaKnown RBP eCLIP20.73■□□□□ 0.91
CBWD3-211ENST00000615061 SCARF1Q14162 830 aa20.73■□□□□ 0.91
CBWD3-211ENST00000615061 FRAT2O75474 233 aaPredicted RBP20.72■□□□□ 0.91
CBWD3-211ENST00000615061 NBPF9Q3BBW0 867 aa20.72■□□□□ 0.91
CBWD3-211ENST00000615061 MFSD14BQ5SR56 506 aa20.72■□□□□ 0.91
CBWD3-211ENST00000615061 GGA3Q9NZ52 723 aa20.72■□□□□ 0.91
CBWD3-211ENST00000615061 A0A1B0GUL7 405 aa20.72■□□□□ 0.91
CBWD3-211ENST00000615061 SURF6O75683 361 aaKnown RBP20.72■□□□□ 0.91
CBWD3-211ENST00000615061 GRIK5Q16478 980 aa20.72■□□□□ 0.91
CBWD3-211ENST00000615061 SCAF8Q9UPN6 1271 aaKnown RBP20.72■□□□□ 0.91
CBWD3-211ENST00000615061 PCDHAC2Q9Y5I4 1007 aa20.72■□□□□ 0.91
CBWD3-211ENST00000615061 COL1A1P02452 1464 aaPredicted RBP20.71■□□□□ 0.91
CBWD3-211ENST00000615061 PHKA1P46020 1223 aa20.71■□□□□ 0.91
CBWD3-211ENST00000615061 ANGEL2Q5VTE6 544 aaKnown RBP20.71■□□□□ 0.91
CBWD3-211ENST00000615061 USP48Q86UV5 1035 aa20.71■□□□□ 0.91
CBWD3-211ENST00000615061 WNT10BO00744 389 aa20.7■□□□□ 0.9
CBWD3-211ENST00000615061 FKBP1AP62942 108 aaKnown RBP20.7■□□□□ 0.9
CBWD3-211ENST00000615061 DNAJC5GQ8N7S2 189 aa20.7■□□□□ 0.9
CBWD3-211ENST00000615061 ADM5C9JUS6 153 aa20.69■□□□□ 0.9
CBWD3-211ENST00000615061 RRP1P56182 461 aaKnown RBP20.69■□□□□ 0.9
CBWD3-211ENST00000615061 CDC37L1Q7L3B6 337 aa20.69■□□□□ 0.9
CBWD3-211ENST00000615061 KRT26Q7Z3Y9 468 aa20.69■□□□□ 0.9
CBWD3-211ENST00000615061 SIRT2Q8IXJ6 389 aa20.69■□□□□ 0.9
CBWD3-211ENST00000615061 HDAC9Q9UKV0 1011 aa20.69■□□□□ 0.9
CBWD3-211ENST00000615061 OS9Q13438 667 aaPredicted RBP20.69■□□□□ 0.9
CBWD3-211ENST00000615061 DCPSQ96C86 337 aaKnown RBP20.69■□□□□ 0.9
CBWD3-211ENST00000615061 XAGE2Q96GT9 111 aa20.69■□□□□ 0.9
CBWD3-211ENST00000615061 NEUROD6Q96NK8 337 aa20.69■□□□□ 0.9
CBWD3-211ENST00000615061 CREBZFQ9NS37 354 aa20.69■□□□□ 0.9
CBWD3-211ENST00000615061 NOP58Q9Y2X3 529 aaKnown RBP20.69■□□□□ 0.9
CBWD3-211ENST00000615061 TMEM88BA6NKF7 163 aa20.68■□□□□ 0.9
CBWD3-211ENST00000615061 CST9Q5W186 159 aa20.68■□□□□ 0.9
CBWD3-211ENST00000615061 CCDC102BQ68D86 513 aa20.68■□□□□ 0.9
CBWD3-211ENST00000615061 EXOC6BQ9Y2D4 811 aa20.68■□□□□ 0.9
CBWD3-211ENST00000615061 AKAP2Q9Y2D5 859 aa20.68■□□□□ 0.9
CBWD3-211ENST00000615061 ZBED3Q96IU2 234 aaPredicted RBP20.67■□□□□ 0.9
CBWD3-211ENST00000615061 TTF2Q9UNY4 1162 aaKnown RBP20.67■□□□□ 0.9
CBWD3-211ENST00000615061 AOX1Q06278 1338 aa20.67■□□□□ 0.9
CBWD3-211ENST00000615061 ZNF408Q9H9D4 720 aa20.67■□□□□ 0.9
CBWD3-211ENST00000615061 CFAP100Q494V2 611 aa20.66■□□□□ 0.9
CBWD3-211ENST00000615061 ECM29Q5VYK3 1845 aa20.66■□□□□ 0.9
CBWD3-211ENST00000615061 CELF2O95319 508 aaKnown RBP20.65■□□□□ 0.9
CBWD3-211ENST00000615061 DLGAP5Q15398 846 aa20.65■□□□□ 0.9
CBWD3-211ENST00000615061 SULF1Q8IWU6 871 aa20.65■□□□□ 0.9
CBWD3-211ENST00000615061 RPAP2Q8IXW5 612 aaPredicted RBP20.65■□□□□ 0.9
CBWD3-211ENST00000615061 MMP14P50281 582 aa20.64■□□□□ 0.9
CBWD3-211ENST00000615061 TBC1D22AQ8WUA7 517 aa20.64■□□□□ 0.9
CBWD3-211ENST00000615061 PRMT6Q96LA8 375 aaPredicted RBP20.64■□□□□ 0.9
CBWD3-211ENST00000615061 GNL3LQ9NVN8 582 aaKnown RBP20.64■□□□□ 0.9
CBWD3-211ENST00000615061 MKRN1Q9UHC7 482 aaKnown RBP20.64■□□□□ 0.9
CBWD3-211ENST00000615061 RBM5P52756 815 aaKnown RBP eCLIP20.64■□□□□ 0.89
CBWD3-211ENST00000615061 RASGRF1Q13972 1273 aa20.64■□□□□ 0.89
CBWD3-211ENST00000615061 TNNI3KQ59H18 835 aa20.64■□□□□ 0.89
CBWD3-211ENST00000615061 KLRG1Q96E93 195 aa20.64■□□□□ 0.89
CBWD3-211ENST00000615061 CHMP4BQ9H444 224 aaKnown RBP20.64■□□□□ 0.89
CBWD3-211ENST00000615061 FPGT-TNNI3KV9GXZ4 949 aa20.64■□□□□ 0.89
CBWD3-211ENST00000615061 SPDYE2BA6NHP3 402 aa20.63■□□□□ 0.89
CBWD3-211ENST00000615061 SPDYE6P0CI01 402 aa20.63■□□□□ 0.89
CBWD3-211ENST00000615061 MTMR14Q8NCE2 650 aa20.63■□□□□ 0.89
CBWD3-211ENST00000615061 PITPNM2Q9BZ72 1349 aa20.63■□□□□ 0.89
CBWD3-211ENST00000615061 PRAMEF18Q5VWM3 479 aa20.62■□□□□ 0.89
CBWD3-211ENST00000615061 WDR66Q8TBY9 1149 aa20.62■□□□□ 0.89
CBWD3-211ENST00000615061 ABT1Q9ULW3 272 aaKnown RBP20.62■□□□□ 0.89
CBWD3-211ENST00000615061 CLRN2A0PK11 232 aa20.62■□□□□ 0.89
CBWD3-211ENST00000615061 CRKP46108 304 aa20.62■□□□□ 0.89
CBWD3-211ENST00000615061 GORABQ5T7V8 394 aa20.62■□□□□ 0.89
CBWD3-211ENST00000615061 PI16Q6UXB8 463 aa20.62■□□□□ 0.89
CBWD3-211ENST00000615061 DBNDD2Q9BQY9 259 aa20.62■□□□□ 0.89
CBWD3-211ENST00000615061 GPR108Q9NPR9 543 aa20.62■□□□□ 0.89
CBWD3-211ENST00000615061 SERPINA10Q9UK55 444 aa20.62■□□□□ 0.89
CBWD3-211ENST00000615061 DENND2AQ9ULE3 1009 aa20.62■□□□□ 0.89
CBWD3-211ENST00000615061 APBB1O00213 710 aa20.61■□□□□ 0.89
CBWD3-211ENST00000615061 PRDX5P30044 214 aa20.61■□□□□ 0.89
CBWD3-211ENST00000615061 CDCA5Q96FF9 252 aa20.61■□□□□ 0.89
CBWD3-211ENST00000615061 TLR7Q9NYK1 1049 aaKnown RBP20.61■□□□□ 0.89
CBWD3-211ENST00000615061 SEMA3EO15041 775 aa20.6■□□□□ 0.89
CBWD3-211ENST00000615061 HMMRO75330 724 aa20.6■□□□□ 0.89
CBWD3-211ENST00000615061 EAF2Q96CJ1 260 aaPredicted RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms