RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 TTLL7Q6ZT98 887 aa14.49□□□□□ -0.09
MSH6-213ENST00000614496 FEZ1Q99689 392 aa14.49□□□□□ -0.09
MSH6-213ENST00000614496 MYL10Q9BUA6 226 aa14.49□□□□□ -0.09
MSH6-213ENST00000614496 ABCF2Q9UG63 623 aa14.49□□□□□ -0.09
MSH6-213ENST00000614496 CLTCQ00610 1675 aaKnown RBP14.49□□□□□ -0.09
MSH6-213ENST00000614496 NDUFA8P51970 172 aa14.49□□□□□ -0.09
MSH6-213ENST00000614496 GPS2Q13227 327 aa14.49□□□□□ -0.09
MSH6-213ENST00000614496 CLIC4Q9Y696 253 aa14.49□□□□□ -0.09
MSH6-213ENST00000614496 COL9A3Q14050 684 aaPredicted RBP14.48□□□□□ -0.09
MSH6-213ENST00000614496 GOLGA6L1Q8N7Z2 621 aa14.48□□□□□ -0.09
MSH6-213ENST00000614496 PHKBQ93100 1093 aa14.48□□□□□ -0.09
MSH6-213ENST00000614496 MPHOSPH8Q99549 860 aa14.48□□□□□ -0.09
MSH6-213ENST00000614496 NRKQ7Z2Y5 1582 aa14.48□□□□□ -0.09
MSH6-213ENST00000614496 PDIA3P30101 505 aaKnown RBP14.48□□□□□ -0.09
MSH6-213ENST00000614496 ANKRD20A12PQ8NF67 263 aa14.48□□□□□ -0.09
MSH6-213ENST00000614496 PLBD2Q8NHP8 589 aa14.48□□□□□ -0.09
MSH6-213ENST00000614496 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.48□□□□□ -0.09
MSH6-213ENST00000614496 ZSCAN12O43309 604 aa14.48□□□□□ -0.09
MSH6-213ENST00000614496 PUS3Q9BZE2 481 aaKnown RBP14.48□□□□□ -0.09
MSH6-213ENST00000614496 ZBTB43O43298 467 aa14.48□□□□□ -0.09
MSH6-213ENST00000614496 CASQ1P31415 396 aa14.48□□□□□ -0.09
MSH6-213ENST00000614496 SSRP1Q08945 709 aaKnown RBP14.48□□□□□ -0.09
MSH6-213ENST00000614496 ANO1Q5XXA6 986 aa14.48□□□□□ -0.09
MSH6-213ENST00000614496 DCAF5Q96JK2 942 aa14.48□□□□□ -0.09
MSH6-213ENST00000614496 LRP2BPQ9P2M1 347 aa14.48□□□□□ -0.09
MSH6-213ENST00000614496 TRMT112Q9UI30 125 aaKnown RBP14.48□□□□□ -0.09
MSH6-213ENST00000614496 XBP1P17861 261 aa14.47□□□□□ -0.09
MSH6-213ENST00000614496 GTF2F1P35269 517 aaKnown RBP eCLIP14.47□□□□□ -0.092e-7■■■■■ 27.6
MSH6-213ENST00000614496 FILIP1LQ4L180 1135 aa14.47□□□□□ -0.09
MSH6-213ENST00000614496 ARHGEF25Q86VW2 580 aa14.47□□□□□ -0.09
MSH6-213ENST00000614496 UBAC1Q9BSL1 405 aa14.47□□□□□ -0.09
MSH6-213ENST00000614496 FANCCQ00597 558 aa14.47□□□□□ -0.09
MSH6-213ENST00000614496 DPCR1Q3MIW9 517 aa14.47□□□□□ -0.09
MSH6-213ENST00000614496 NACAP1Q9BZK3 213 aa14.47□□□□□ -0.09
MSH6-213ENST00000614496 AXIN2Q9Y2T1 843 aa14.47□□□□□ -0.09
MSH6-213ENST00000614496 B4E1Z4 1266 aa14.47□□□□□ -0.09
MSH6-213ENST00000614496 ST3GAL1Q11201 340 aa14.47□□□□□ -0.09
MSH6-213ENST00000614496 BMS1Q14692 1282 aaKnown RBP14.47□□□□□ -0.09
MSH6-213ENST00000614496 ZNF710Q8N1W2 664 aa14.47□□□□□ -0.09
MSH6-213ENST00000614496 KIAA1468Q9P260 1216 aa14.47□□□□□ -0.09
MSH6-213ENST00000614496 USP27XA6NNY8 438 aa14.46□□□□□ -0.09
MSH6-213ENST00000614496 ZAP70P43403 619 aa14.46□□□□□ -0.09
MSH6-213ENST00000614496 ERCC6LQ2NKX8 1250 aa14.46□□□□□ -0.09
MSH6-213ENST00000614496 XAGE2Q96GT9 111 aa14.46□□□□□ -0.09
MSH6-213ENST00000614496 ERO1AQ96HE7 468 aa14.46□□□□□ -0.09
MSH6-213ENST00000614496 ZKSCAN3Q9BRR0 538 aa14.46□□□□□ -0.09
MSH6-213ENST00000614496 IQSEC3Q9UPP2 1182 aaPredicted RBP14.46□□□□□ -0.09
MSH6-213ENST00000614496 NOL10Q9BSC4 688 aaKnown RBP14.46□□□□□ -0.09
MSH6-213ENST00000614496 GOLPH3LQ9H4A5 285 aa14.46□□□□□ -0.09
MSH6-213ENST00000614496 TMOD3Q9NYL9 352 aa14.46□□□□□ -0.09
MSH6-213ENST00000614496 RCOR1Q9UKL0 485 aa14.46□□□□□ -0.09
MSH6-213ENST00000614496 NCBP1Q09161 790 aaKnown RBP14.46□□□□□ -0.1
MSH6-213ENST00000614496 DHX8Q14562 1220 aaKnown RBP14.46□□□□□ -0.1
MSH6-213ENST00000614496 KARSQ15046 597 aaKnown RBP14.46□□□□□ -0.1
MSH6-213ENST00000614496 MRFAP1L1Q96HT8 127 aa14.46□□□□□ -0.1
MSH6-213ENST00000614496 DACH1Q9UI36 760 aa14.46□□□□□ -0.1
MSH6-213ENST00000614496 GPAA1O43292 621 aa14.45□□□□□ -0.1
MSH6-213ENST00000614496 ZFYP08048 801 aaPredicted RBP14.45□□□□□ -0.1
MSH6-213ENST00000614496 PHKG2P15735 406 aa14.45□□□□□ -0.1
MSH6-213ENST00000614496 ADD1P35611 737 aaKnown RBP14.45□□□□□ -0.1
MSH6-213ENST00000614496 AFMP43652 599 aa14.45□□□□□ -0.1
MSH6-213ENST00000614496 MYSM1Q5VVJ2 828 aa14.45□□□□□ -0.1
MSH6-213ENST00000614496 GOLGA8FQ08AF8 430 aa14.45□□□□□ -0.1
MSH6-213ENST00000614496 GOLGA8DPQ0D2H9 430 aa14.45□□□□□ -0.1
MSH6-213ENST00000614496 FUCA2Q9BTY2 467 aa14.45□□□□□ -0.1
MSH6-213ENST00000614496 DSCC1Q9BVC3 393 aa14.45□□□□□ -0.1
MSH6-213ENST00000614496 ANKRD18BA2A2Z9 1011 aa14.45□□□□□ -0.1
MSH6-213ENST00000614496 ADALQ6DHV7 355 aa14.45□□□□□ -0.1
MSH6-213ENST00000614496 STX17P56962 302 aa14.44□□□□□ -0.1
MSH6-213ENST00000614496 BRAPQ7Z569 592 aa14.44□□□□□ -0.1
MSH6-213ENST00000614496 SMARCE1Q969G3 411 aa14.44□□□□□ -0.1
MSH6-213ENST00000614496 BRMS1Q9HCU9 246 aa14.44□□□□□ -0.1
MSH6-213ENST00000614496 PODXL2Q9NZ53 605 aa14.44□□□□□ -0.1
MSH6-213ENST00000614496 ADORA1P30542 326 aa14.44□□□□□ -0.1
MSH6-213ENST00000614496 DMTNQ08495 405 aa14.44□□□□□ -0.1
MSH6-213ENST00000614496 ATL3Q6DD88 541 aa14.44□□□□□ -0.1
MSH6-213ENST00000614496 PI16Q6UXB8 463 aa14.44□□□□□ -0.1
MSH6-213ENST00000614496 CCDC12Q8WUD4 166 aaPredicted RBP14.44□□□□□ -0.1
MSH6-213ENST00000614496 FGAP02671 866 aa14.44□□□□□ -0.1
MSH6-213ENST00000614496 PFKFB1P16118 471 aa14.44□□□□□ -0.1
MSH6-213ENST00000614496 STOX1Q6ZVD7 989 aa14.44□□□□□ -0.1
MSH6-213ENST00000614496 ZCRB1Q8TBF4 217 aaKnown RBP14.44□□□□□ -0.1
MSH6-213ENST00000614496 RAI14Q9P0K7 980 aa14.44□□□□□ -0.1
MSH6-213ENST00000614496 ADAMTS13Q76LX8 1427 aa14.44□□□□□ -0.1
MSH6-213ENST00000614496 MAST3O60307 1309 aa14.44□□□□□ -0.1
MSH6-213ENST00000614496 USP42Q9H9J4 1324 aaKnown RBP14.44□□□□□ -0.1
MSH6-213ENST00000614496 KIF4BQ2VIQ3 1234 aa14.44□□□□□ -0.1
MSH6-213ENST00000614496 HSP90B2PQ58FF3 399 aa14.44□□□□□ -0.1
MSH6-213ENST00000614496 IPO7O95373 1038 aaKnown RBP14.43□□□□□ -0.1
MSH6-213ENST00000614496 MYL5Q02045 173 aa14.43□□□□□ -0.1
MSH6-213ENST00000614496 PNOCQ13519 176 aa14.43□□□□□ -0.1
MSH6-213ENST00000614496 PLA2G4DQ86XP0 818 aa14.43□□□□□ -0.1
MSH6-213ENST00000614496 KAZALD1Q96I82 304 aa14.43□□□□□ -0.1
MSH6-213ENST00000614496 A0A0G2JLW4 131 aa14.43□□□□□ -0.1
MSH6-213ENST00000614496 WASF1Q92558 559 aa14.43□□□□□ -0.1
MSH6-213ENST00000614496 AIFM3Q96NN9 605 aa14.43□□□□□ -0.1
MSH6-213ENST00000614496 CARD6Q9BX69 1037 aa14.43□□□□□ -0.1
MSH6-213ENST00000614496 KNDC1Q76NI1 1749 aa14.43□□□□□ -0.1
MSH6-213ENST00000614496 M0R2C6 588 aa14.43□□□□□ -0.1
MSH6-213ENST00000614496 STARD3NLO95772 234 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms