RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 HOXD11P31277 338 aaPredicted RBP7.58□□□□□ -1.2
CBWD3-210ENST00000614398 RASGRF1Q13972 1273 aa7.58□□□□□ -1.2
CBWD3-210ENST00000614398 PODNQ7Z5L7 613 aa7.58□□□□□ -1.2
CBWD3-210ENST00000614398 ZGPATQ8N5A5 531 aaKnown RBP7.58□□□□□ -1.2
CBWD3-210ENST00000614398 SPATA5Q8NB90 893 aa7.58□□□□□ -1.2
CBWD3-210ENST00000614398 NLGN2Q8NFZ4 835 aa7.58□□□□□ -1.2
CBWD3-210ENST00000614398 WDR66Q8TBY9 1149 aa7.58□□□□□ -1.2
CBWD3-210ENST00000614398 SYT17Q9BSW7 474 aa7.58□□□□□ -1.2
CBWD3-210ENST00000614398 PAG1Q9NWQ8 432 aa7.58□□□□□ -1.2
CBWD3-210ENST00000614398 HMG20BQ9P0W2 317 aa7.58□□□□□ -1.2
CBWD3-210ENST00000614398 KLRK1P26718 216 aa7.58□□□□□ -1.2
CBWD3-210ENST00000614398 COL4A5P29400 1685 aa7.58□□□□□ -1.2
CBWD3-210ENST00000614398 TBC1D22AQ8WUA7 517 aa7.58□□□□□ -1.2
CBWD3-210ENST00000614398 CD209Q9NNX6 404 aa7.58□□□□□ -1.2
CBWD3-210ENST00000614398 MYO5AQ9Y4I1 1855 aaKnown RBP7.58□□□□□ -1.2
CBWD3-210ENST00000614398 SCN9AQ15858 1988 aa7.57□□□□□ -1.2
CBWD3-210ENST00000614398 C21orf2O43822 256 aa7.57□□□□□ -1.2
CBWD3-210ENST00000614398 GYG1P46976 350 aa7.57□□□□□ -1.2
CBWD3-210ENST00000614398 BCAMP50895 628 aa7.57□□□□□ -1.2
CBWD3-210ENST00000614398 WASHC4Q2M389 1173 aa7.57□□□□□ -1.2
CBWD3-210ENST00000614398 ZSCAN25Q6NSZ9 544 aa7.57□□□□□ -1.2
CBWD3-210ENST00000614398 ZC3H12CQ9C0D7 883 aaKnown RBP7.57□□□□□ -1.2
CBWD3-210ENST00000614398 FOCADQ5VW36 1801 aa7.57□□□□□ -1.2
CBWD3-210ENST00000614398 C6orf229H3BNL8 230 aa7.57□□□□□ -1.2
CBWD3-210ENST00000614398 NFKBIEO00221 500 aa7.57□□□□□ -1.2
CBWD3-210ENST00000614398 SCARF1Q14162 830 aa7.57□□□□□ -1.2
CBWD3-210ENST00000614398 C8orf34Q49A92 452 aa7.57□□□□□ -1.2
CBWD3-210ENST00000614398 SPTY2D1Q68D10 685 aaPredicted RBP7.57□□□□□ -1.2
CBWD3-210ENST00000614398 TXNRD3Q86VQ6 643 aa7.57□□□□□ -1.2
CBWD3-210ENST00000614398 SKAP1Q86WV1 359 aa7.57□□□□□ -1.2
CBWD3-210ENST00000614398 IL27Q8NEV9 243 aa7.57□□□□□ -1.2
CBWD3-210ENST00000614398 MRIQ9BWK5 157 aa7.57□□□□□ -1.2
CBWD3-210ENST00000614398 TAOK3Q9H2K8 898 aa7.57□□□□□ -1.2
CBWD3-210ENST00000614398 ZC3H4Q9UPT8 1303 aaKnown RBP7.56□□□□□ -1.2
CBWD3-210ENST00000614398 SNAP23O00161 211 aa7.56□□□□□ -1.2
CBWD3-210ENST00000614398 CYP2E1P05181 493 aaPredicted RBP7.56□□□□□ -1.2
CBWD3-210ENST00000614398 UBE3CQ15386 1083 aa7.56□□□□□ -1.2
CBWD3-210ENST00000614398 SLC51AQ86UW1 340 aa7.56□□□□□ -1.2
CBWD3-210ENST00000614398 VPS37DQ86XT2 251 aa7.56□□□□□ -1.2
CBWD3-210ENST00000614398 BOLA2Q9H3K6 86 aa7.56□□□□□ -1.2
CBWD3-210ENST00000614398 PPP1R1BQ9UD71 204 aaPredicted RBP7.56□□□□□ -1.2
CBWD3-210ENST00000614398 MYO3BQ8WXR4 1341 aa7.56□□□□□ -1.2
CBWD3-210ENST00000614398 WTIPA6NIX2 430 aaPredicted RBP7.56□□□□□ -1.2
CBWD3-210ENST00000614398 MAP4K4O95819 1239 aaPredicted RBP7.56□□□□□ -1.2
CBWD3-210ENST00000614398 CHMLP26374 656 aa7.56□□□□□ -1.2
CBWD3-210ENST00000614398 IARSP41252 1262 aaKnown RBP7.56□□□□□ -1.2
CBWD3-210ENST00000614398 ZAP70P43403 619 aa7.56□□□□□ -1.2
CBWD3-210ENST00000614398 TSHZ3Q63HK5 1081 aa7.56□□□□□ -1.2
CBWD3-210ENST00000614398 CASC1Q6TDU7 716 aa7.56□□□□□ -1.2
CBWD3-210ENST00000614398 CERS3Q8IU89 383 aa7.56□□□□□ -1.2
CBWD3-210ENST00000614398 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.56□□□□□ -1.2
CBWD3-210ENST00000614398 HELLSQ9NRZ9 838 aa7.56□□□□□ -1.2
CBWD3-210ENST00000614398 LAMA4Q16363 1823 aa7.55□□□□□ -1.2
CBWD3-210ENST00000614398 DDX60LQ5H9U9 1706 aaKnown RBP7.55□□□□□ -1.2
CBWD3-210ENST00000614398 RPAP1Q9BWH6 1393 aaPredicted RBP7.55□□□□□ -1.2
CBWD3-210ENST00000614398 ECM29Q5VYK3 1845 aa7.55□□□□□ -1.2
CBWD3-210ENST00000614398 HDLBPQ00341 1268 aaKnown RBP7.55□□□□□ -1.2
CBWD3-210ENST00000614398 ZMYM1Q5SVZ6 1142 aa7.55□□□□□ -1.2
CBWD3-210ENST00000614398 STRIP1Q5VSL9 837 aa7.55□□□□□ -1.2
CBWD3-210ENST00000614398 OLFM4Q6UX06 510 aa7.55□□□□□ -1.2
CBWD3-210ENST00000614398 RUFY2Q8WXA3 655 aa7.55□□□□□ -1.2
CBWD3-210ENST00000614398 FAM163AQ96GL9 167 aaPredicted RBP7.55□□□□□ -1.2
CBWD3-210ENST00000614398 MAST3O60307 1309 aa7.55□□□□□ -1.2
CBWD3-210ENST00000614398 TCRBV5S4A2TA0A5A2 114 aa7.55□□□□□ -1.2
CBWD3-210ENST00000614398 RNF113AO15541 343 aaKnown RBP7.55□□□□□ -1.2
CBWD3-210ENST00000614398 ECE2O60344 883 aa7.55□□□□□ -1.2
CBWD3-210ENST00000614398 ADD2P35612 726 aa7.55□□□□□ -1.2
CBWD3-210ENST00000614398 TBC1D9Q6ZT07 1266 aa7.55□□□□□ -1.2
CBWD3-210ENST00000614398 IL17RAQ96F46 866 aa7.55□□□□□ -1.2
CBWD3-210ENST00000614398 BACH2Q9BYV9 841 aa7.55□□□□□ -1.2
CBWD3-210ENST00000614398 PIH1D3Q9NQM4 214 aaKnown RBP7.55□□□□□ -1.2
CBWD3-210ENST00000614398 ZMYM6O95789 1325 aa7.54□□□□□ -1.2
CBWD3-210ENST00000614398 GOLIM4O00461 696 aa7.54□□□□□ -1.2
CBWD3-210ENST00000614398 PPIP5K2O43314 1243 aa7.54□□□□□ -1.2
CBWD3-210ENST00000614398 MAP3K12Q12852 859 aa7.54□□□□□ -1.2
CBWD3-210ENST00000614398 DACT2Q5SW24 774 aa7.54□□□□□ -1.2
CBWD3-210ENST00000614398 FSD1Q9BTV5 496 aa7.54□□□□□ -1.2
CBWD3-210ENST00000614398 ZMYND15Q9H091 742 aa7.54□□□□□ -1.2
CBWD3-210ENST00000614398 ZNRF3Q9ULT6 936 aa7.54□□□□□ -1.2
CBWD3-210ENST00000614398 BCS1LQ9Y276 419 aa7.54□□□□□ -1.2
CBWD3-210ENST00000614398 CDK5RAP2Q96SN8 1893 aa7.54□□□□□ -1.2
CBWD3-210ENST00000614398 GAKO14976 1311 aa7.54□□□□□ -1.2
CBWD3-210ENST00000614398 TRIM6-TRIM34B2RNG4 842 aa7.54□□□□□ -1.2
CBWD3-210ENST00000614398 SGSM2O43147 1006 aa7.54□□□□□ -1.2
CBWD3-210ENST00000614398 GSTO1P78417 241 aa7.54□□□□□ -1.2
CBWD3-210ENST00000614398 APPBP2Q92624 585 aa7.54□□□□□ -1.2
CBWD3-210ENST00000614398 DNAJC2Q99543 621 aaKnown RBP7.54□□□□□ -1.2
CBWD3-210ENST00000614398 ESYT1Q9BSJ8 1104 aa7.54□□□□□ -1.2
CBWD3-210ENST00000614398 RNF216Q9NWF9 866 aaPredicted RBP7.54□□□□□ -1.2
CBWD3-210ENST00000614398 MYH2Q9UKX2 1941 aa7.53□□□□□ -1.2
CBWD3-210ENST00000614398 LAMB1P07942 1786 aa7.53□□□□□ -1.2
CBWD3-210ENST00000614398 USP17L3A6NCW0 530 aa7.53□□□□□ -1.2
CBWD3-210ENST00000614398 USP17L4A6NCW7 530 aa7.53□□□□□ -1.2
CBWD3-210ENST00000614398 FZD9O00144 591 aa7.53□□□□□ -1.2
CBWD3-210ENST00000614398 GRIN3BO60391 1043 aa7.53□□□□□ -1.2
CBWD3-210ENST00000614398 VIL1P09327 827 aaKnown RBP7.53□□□□□ -1.2
CBWD3-210ENST00000614398 PDE6AP16499 860 aa7.53□□□□□ -1.2
CBWD3-210ENST00000614398 LMNB1P20700 586 aa7.53□□□□□ -1.2
CBWD3-210ENST00000614398 RPS12P25398 132 aaKnown RBP7.53□□□□□ -1.2
CBWD3-210ENST00000614398 MFAP1P55081 439 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms