RNA–Protein interactions for RNA: ENST00000613296.4

ALMS1-206, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,925 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-206ENST00000613296 GIMAP4Q9NUV9 329 aa9.4□□□□□ -0.9
ALMS1-206ENST00000613296 CCDC26Q8TAB7 109 aa9.4□□□□□ -0.9
ALMS1-206ENST00000613296 LZTFL1Q9NQ48 299 aa9.4□□□□□ -0.9
ALMS1-206ENST00000613296 HAUS2Q9NVX0 235 aa9.4□□□□□ -0.9
ALMS1-206ENST00000613296 STK38LQ9Y2H1 464 aa9.4□□□□□ -0.9
ALMS1-206ENST00000613296 BTBD11A6QL63 1104 aa9.4□□□□□ -0.91
ALMS1-206ENST00000613296 VGLL3A8MV65 326 aa9.4□□□□□ -0.91
ALMS1-206ENST00000613296 ZPR1O75312 459 aa9.4□□□□□ -0.91
ALMS1-206ENST00000613296 METAP2P50579 478 aaKnown RBP eCLIP9.4□□□□□ -0.91
ALMS1-206ENST00000613296 KLHDC4Q8TBB5 520 aa9.4□□□□□ -0.91
ALMS1-206ENST00000613296 TACO1Q9BSH4 297 aaKnown RBP9.4□□□□□ -0.91
ALMS1-206ENST00000613296 MAN1A2O60476 641 aa9.4□□□□□ -0.91
ALMS1-206ENST00000613296 UTP14CQ5TAP6 766 aaKnown RBP9.4□□□□□ -0.91
ALMS1-206ENST00000613296 LEO1Q8WVC0 666 aaPredicted RBP9.4□□□□□ -0.91
ALMS1-206ENST00000613296 IFIT1P09914 478 aaKnown RBP9.39□□□□□ -0.91
ALMS1-206ENST00000613296 HHATQ5VTY9 493 aa9.39□□□□□ -0.91
ALMS1-206ENST00000613296 STAG1Q8WVM7 1258 aa9.39□□□□□ -0.91
ALMS1-206ENST00000613296 PPP1R9AQ9ULJ8 1098 aa9.39□□□□□ -0.91
ALMS1-206ENST00000613296 RASSF2P50749 326 aa9.39□□□□□ -0.91
ALMS1-206ENST00000613296 PPP2R3AQ06190 1150 aa9.39□□□□□ -0.91
ALMS1-206ENST00000613296 ZSCAN23Q3MJ62 389 aa9.39□□□□□ -0.91
ALMS1-206ENST00000613296 FAM212AQ96EL1 285 aa9.39□□□□□ -0.91
ALMS1-206ENST00000613296 KAT14Q9H8E8 782 aa9.39□□□□□ -0.91
ALMS1-206ENST00000613296 CCT6AP40227 531 aaKnown RBP9.39□□□□□ -0.91
ALMS1-206ENST00000613296 SLC8A3P57103 927 aa9.39□□□□□ -0.91
ALMS1-206ENST00000613296 PROSER2Q86WR7 435 aaPredicted RBP9.39□□□□□ -0.91
ALMS1-206ENST00000613296 RNF34Q969K3 372 aa9.39□□□□□ -0.91
ALMS1-206ENST00000613296 FAN1Q9Y2M0 1017 aa9.39□□□□□ -0.91
ALMS1-206ENST00000613296 PPFIA3O75145 1194 aa9.39□□□□□ -0.91
ALMS1-206ENST00000613296 GLRX3O76003 335 aaKnown RBP9.39□□□□□ -0.91
ALMS1-206ENST00000613296 TMEM67Q5HYA8 995 aa9.39□□□□□ -0.91
ALMS1-206ENST00000613296 PPP4R1Q8TF05 950 aa9.39□□□□□ -0.91
ALMS1-206ENST00000613296 NOLC1Q14978 699 aaKnown RBP eCLIP9.39□□□□□ -0.91
ALMS1-206ENST00000613296 SPOPO43791 374 aa9.39□□□□□ -0.91
ALMS1-206ENST00000613296 HLA-DOAP06340 250 aa9.39□□□□□ -0.91
ALMS1-206ENST00000613296 CCDC93Q567U6 631 aa9.39□□□□□ -0.91
ALMS1-206ENST00000613296 RPGRQ92834 1020 aaKnown RBP9.39□□□□□ -0.91
ALMS1-206ENST00000613296 BMP15O95972 392 aa9.39□□□□□ -0.91
ALMS1-206ENST00000613296 ATAD2Q6PL18 1390 aa9.39□□□□□ -0.91
ALMS1-206ENST00000613296 TUBBP07437 444 aa9.38□□□□□ -0.91
ALMS1-206ENST00000613296 POMGNT1Q8WZA1 660 aa9.38□□□□□ -0.91
ALMS1-206ENST00000613296 ZNF830Q96NB3 372 aaPredicted RBP9.38□□□□□ -0.91
ALMS1-206ENST00000613296 NAP1L4Q99733 375 aaKnown RBP9.38□□□□□ -0.91
ALMS1-206ENST00000613296 MFSD6Q6ZSS7 791 aa9.38□□□□□ -0.91
ALMS1-206ENST00000613296 RTL1A6NKG5 1358 aa9.38□□□□□ -0.91
ALMS1-206ENST00000613296 AKNAD1Q5T1N1 836 aa9.38□□□□□ -0.91
ALMS1-206ENST00000613296 OGFRQ9NZT2 677 aa9.38□□□□□ -0.91
ALMS1-206ENST00000613296 PPFIA1Q13136 1202 aa9.38□□□□□ -0.91
ALMS1-206ENST00000613296 KRT5P13647 590 aa9.38□□□□□ -0.91
ALMS1-206ENST00000613296 TMEM132EQ6IEE7 984 aa9.38□□□□□ -0.91
ALMS1-206ENST00000613296 HELBQ8NG08 1087 aaPredicted RBP9.38□□□□□ -0.91
ALMS1-206ENST00000613296 SLC26A6Q9BXS9 759 aa9.38□□□□□ -0.91
ALMS1-206ENST00000613296 FHOD3Q2V2M9 1422 aa9.38□□□□□ -0.91
ALMS1-206ENST00000613296 C8orf74Q6P047 294 aa9.38□□□□□ -0.91
ALMS1-206ENST00000613296 SPATS2LQ9NUQ6 558 aaKnown RBP9.38□□□□□ -0.91
ALMS1-206ENST00000613296 SERPINI2O75830 405 aa9.38□□□□□ -0.91
ALMS1-206ENST00000613296 DRC3Q9H069 523 aa9.38□□□□□ -0.91
ALMS1-206ENST00000613296 ABCC8Q09428 1581 aa9.38□□□□□ -0.91
ALMS1-206ENST00000613296 TMED1Q13445 227 aa9.38□□□□□ -0.91
ALMS1-206ENST00000613296 RPS6KA2Q15349 733 aa9.38□□□□□ -0.91
ALMS1-206ENST00000613296 AOPEPQ8N6M6 819 aa9.38□□□□□ -0.91
ALMS1-206ENST00000613296 FAM200AQ8TCP9 573 aa9.38□□□□□ -0.91
ALMS1-206ENST00000613296 ABTB1Q969K4 478 aaPredicted RBP9.38□□□□□ -0.91
ALMS1-206ENST00000613296 RILPQ96NA2 401 aa9.38□□□□□ -0.91
ALMS1-206ENST00000613296 STX10O60499 249 aa9.38□□□□□ -0.91
ALMS1-206ENST00000613296 NUB1Q9Y5A7 615 aa9.38□□□□□ -0.91
ALMS1-206ENST00000613296 UVSSAQ2YD98 709 aa9.37□□□□□ -0.91
ALMS1-206ENST00000613296 SUFUQ9UMX1 484 aa9.37□□□□□ -0.91
ALMS1-206ENST00000613296 IARSP41252 1262 aaKnown RBP9.37□□□□□ -0.91
ALMS1-206ENST00000613296 KIFAP3Q92845 792 aa9.37□□□□□ -0.91
ALMS1-206ENST00000613296 VAT1LQ9HCJ6 419 aa9.37□□□□□ -0.91
ALMS1-206ENST00000613296 DDX21Q9NR30 783 aaKnown RBP eCLIP9.37□□□□□ -0.91
ALMS1-206ENST00000613296 RBM27Q9P2N5 1060 aaKnown RBP9.37□□□□□ -0.91
ALMS1-206ENST00000613296 FYCO1Q9BQS8 1478 aa9.37□□□□□ -0.91
ALMS1-206ENST00000613296 A6NNZ2 444 aa9.37□□□□□ -0.91
ALMS1-206ENST00000613296 TUBB8Q3ZCM7 444 aa9.37□□□□□ -0.91
ALMS1-206ENST00000613296 TEKT2Q9UIF3 430 aa9.37□□□□□ -0.91
ALMS1-206ENST00000613296 EXOC6BQ9Y2D4 811 aa9.37□□□□□ -0.91
ALMS1-206ENST00000613296 CALM1P0DP23 149 aa9.37□□□□□ -0.91
ALMS1-206ENST00000613296 CALM2P0DP24 149 aa9.37□□□□□ -0.91
ALMS1-206ENST00000613296 CALM3P0DP25 149 aa9.37□□□□□ -0.91
ALMS1-206ENST00000613296 CASC4Q6P4E1 433 aa9.37□□□□□ -0.91
ALMS1-206ENST00000613296 TRIM60Q495X7 471 aa9.37□□□□□ -0.91
ALMS1-206ENST00000613296 RIPOR2Q9Y4F9 1068 aa9.37□□□□□ -0.91
ALMS1-206ENST00000613296 KARSQ15046 597 aaKnown RBP9.37□□□□□ -0.91
ALMS1-206ENST00000613296 ZNF569Q5MCW4 686 aa9.37□□□□□ -0.91
ALMS1-206ENST00000613296 TMTC4Q5T4D3 741 aa9.37□□□□□ -0.91
ALMS1-206ENST00000613296 TRIM55Q9BYV6 548 aa9.37□□□□□ -0.91
ALMS1-206ENST00000613296 GDPD2Q9HCC8 539 aa9.37□□□□□ -0.91
ALMS1-206ENST00000613296 ZNF213O14771 459 aa9.37□□□□□ -0.91
ALMS1-206ENST00000613296 HIP1RO75146 1068 aa9.37□□□□□ -0.91
ALMS1-206ENST00000613296 SERPINB6P35237 376 aa9.37□□□□□ -0.91
ALMS1-206ENST00000613296 GFAPP14136 432 aa9.37□□□□□ -0.91
ALMS1-206ENST00000613296 RPAINQ86UA6 219 aa9.37□□□□□ -0.91
ALMS1-206ENST00000613296 GOLGA6BA6NDN3 693 aa9.37□□□□□ -0.91
ALMS1-206ENST00000613296 MUM1L1Q5H9M0 696 aa9.37□□□□□ -0.91
ALMS1-206ENST00000613296 C6orf50Q9HD87 102 aa9.37□□□□□ -0.91
ALMS1-206ENST00000613296 SPATS2Q86XZ4 545 aaKnown RBP9.37□□□□□ -0.91
ALMS1-206ENST00000613296 KCNG4Q8TDN1 519 aa9.37□□□□□ -0.91
ALMS1-206ENST00000613296 EVI5LQ96CN4 794 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms