RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 KANK3Q6NY19 840 aa12.18□□□□□ -0.46
CNTNAP3B-211ENST00000612828 NAP1L4Q99733 375 aaKnown RBP12.18□□□□□ -0.46
CNTNAP3B-211ENST00000612828 CDK19Q9BWU1 502 aa12.18□□□□□ -0.46
CNTNAP3B-211ENST00000612828 AGTPBP1Q9UPW5 1226 aa12.18□□□□□ -0.46
CNTNAP3B-211ENST00000612828 PAFAH1B1P43034 410 aa12.18□□□□□ -0.46
CNTNAP3B-211ENST00000612828 CPSF2Q9P2I0 782 aaKnown RBP12.18□□□□□ -0.46
CNTNAP3B-211ENST00000612828 ADGRF5Q8IZF2 1346 aa12.18□□□□□ -0.46
CNTNAP3B-211ENST00000612828 PPP2R5AQ15172 486 aa12.18□□□□□ -0.46
CNTNAP3B-211ENST00000612828 UBXN8O00124 270 aa12.18□□□□□ -0.46
CNTNAP3B-211ENST00000612828 ZFYVE19Q96K21 471 aa12.18□□□□□ -0.46
CNTNAP3B-211ENST00000612828 RPRD2Q5VT52 1461 aaKnown RBP12.18□□□□□ -0.46
CNTNAP3B-211ENST00000612828 RPS6KA2Q15349 733 aa12.18□□□□□ -0.46
CNTNAP3B-211ENST00000612828 CACTINQ8WUQ7 758 aaKnown RBP12.18□□□□□ -0.46
CNTNAP3B-211ENST00000612828 FRMD6Q96NE9 622 aa12.18□□□□□ -0.46
CNTNAP3B-211ENST00000612828 NDE1Q9NXR1 346 aa12.18□□□□□ -0.46
CNTNAP3B-211ENST00000612828 GRIN2BQ13224 1484 aa12.17□□□□□ -0.46
CNTNAP3B-211ENST00000612828 FMNL1O95466 1100 aaPredicted RBP12.17□□□□□ -0.46
CNTNAP3B-211ENST00000612828 HARSP12081 509 aaKnown RBP12.17□□□□□ -0.46
CNTNAP3B-211ENST00000612828 SMARCC1Q92922 1105 aaPredicted RBP12.17□□□□□ -0.46
CNTNAP3B-211ENST00000612828 PPARGC1AQ9UBK2 798 aaKnown RBP12.17□□□□□ -0.46
CNTNAP3B-211ENST00000612828 SF3B3Q15393 1217 aaKnown RBP12.17□□□□□ -0.46
CNTNAP3B-211ENST00000612828 KIAA1524Q8TCG1 905 aa12.17□□□□□ -0.46
CNTNAP3B-211ENST00000612828 DNAAF4Q8WXU2 420 aa12.17□□□□□ -0.46
CNTNAP3B-211ENST00000612828 YIPF2Q9BWQ6 316 aa12.17□□□□□ -0.46
CNTNAP3B-211ENST00000612828 KLF15Q9UIH9 416 aa12.17□□□□□ -0.46
CNTNAP3B-211ENST00000612828 ARHGAP5Q13017 1502 aa12.17□□□□□ -0.46
CNTNAP3B-211ENST00000612828 MAP3K1Q13233 1512 aa12.17□□□□□ -0.46
CNTNAP3B-211ENST00000612828 KHDRBS2Q5VWX1 349 aaKnown RBP12.17□□□□□ -0.46
CNTNAP3B-211ENST00000612828 PAPOLBQ9NRJ5 636 aaKnown RBP12.17□□□□□ -0.46
CNTNAP3B-211ENST00000612828 CLIP2Q9UDT6 1046 aa12.17□□□□□ -0.46
CNTNAP3B-211ENST00000612828 NBPF15Q8N660 670 aa12.17□□□□□ -0.46
CNTNAP3B-211ENST00000612828 RAD18Q9NS91 495 aa12.17□□□□□ -0.46
CNTNAP3B-211ENST00000612828 HVCN1Q96D96 273 aa12.16□□□□□ -0.46
CNTNAP3B-211ENST00000612828 C6orf203Q9P0P8 240 aaPredicted RBP12.16□□□□□ -0.46
CNTNAP3B-211ENST00000612828 TEKT2Q9UIF3 430 aa12.16□□□□□ -0.46
CNTNAP3B-211ENST00000612828 CTAGE15A4D2H0 777 aa12.16□□□□□ -0.46
CNTNAP3B-211ENST00000612828 HS1BP3Q53T59 392 aa12.16□□□□□ -0.46
CNTNAP3B-211ENST00000612828 USP48Q86UV5 1035 aa12.16□□□□□ -0.46
CNTNAP3B-211ENST00000612828 EHMT1Q9H9B1 1298 aa12.16□□□□□ -0.46
CNTNAP3B-211ENST00000612828 GNAI3P08754 354 aa12.16□□□□□ -0.46
CNTNAP3B-211ENST00000612828 CASC4Q6P4E1 433 aa12.16□□□□□ -0.46
CNTNAP3B-211ENST00000612828 IWS1Q96ST2 819 aa12.16□□□□□ -0.46
CNTNAP3B-211ENST00000612828 RAB11FIP3O75154 756 aa12.16□□□□□ -0.46
CNTNAP3B-211ENST00000612828 CIB2O75838 187 aa12.16□□□□□ -0.46
CNTNAP3B-211ENST00000612828 IVLP07476 585 aa12.16□□□□□ -0.46
CNTNAP3B-211ENST00000612828 ZNF165P49910 485 aa12.16□□□□□ -0.46
CNTNAP3B-211ENST00000612828 UBE3AQ05086 875 aa12.16□□□□□ -0.46
CNTNAP3B-211ENST00000612828 MUM1L1Q5H9M0 696 aa12.16□□□□□ -0.46
CNTNAP3B-211ENST00000612828 MIER3Q7Z3K6 550 aa12.16□□□□□ -0.46
CNTNAP3B-211ENST00000612828 LARP6Q9BRS8 491 aaKnown RBP12.16□□□□□ -0.46
CNTNAP3B-211ENST00000612828 ZSWIM4Q9H7M6 989 aa12.16□□□□□ -0.46
CNTNAP3B-211ENST00000612828 SUGT1Q9Y2Z0 365 aa12.16□□□□□ -0.46
CNTNAP3B-211ENST00000612828 LACTBP83111 547 aaPredicted RBP12.16□□□□□ -0.46
CNTNAP3B-211ENST00000612828 ABHD8Q96I13 439 aa12.16□□□□□ -0.46
CNTNAP3B-211ENST00000612828 LMCD1Q9NZU5 365 aa12.16□□□□□ -0.46
CNTNAP3B-211ENST00000612828 PMS1P54277 932 aaKnown RBP12.16□□□□□ -0.46
CNTNAP3B-211ENST00000612828 FAM167BQ9BTA0 163 aa12.16□□□□□ -0.46
CNTNAP3B-211ENST00000612828 ATP2A2P16615 1042 aaKnown RBP12.15□□□□□ -0.46
CNTNAP3B-211ENST00000612828 GBP5Q96PP8 586 aa12.15□□□□□ -0.46
CNTNAP3B-211ENST00000612828 ISM2Q6H9L7 571 aa12.15□□□□□ -0.46
CNTNAP3B-211ENST00000612828 FERMT3Q86UX7 667 aa12.15□□□□□ -0.46
CNTNAP3B-211ENST00000612828 RYBPQ8N488 228 aaPredicted RBP12.15□□□□□ -0.46
CNTNAP3B-211ENST00000612828 TBC1D5Q92609 795 aa12.15□□□□□ -0.46
CNTNAP3B-211ENST00000612828 APOEP02649 317 aa12.15□□□□□ -0.46
CNTNAP3B-211ENST00000612828 ZNF394Q53GI3 561 aa12.15□□□□□ -0.46
CNTNAP3B-211ENST00000612828 AHI1Q8N157 1196 aa12.15□□□□□ -0.46
CNTNAP3B-211ENST00000612828 OTULINQ96BN8 352 aa12.15□□□□□ -0.46
CNTNAP3B-211ENST00000612828 TRIM8Q9BZR9 551 aa12.15□□□□□ -0.46
CNTNAP3B-211ENST00000612828 GDPD2Q9HCC8 539 aa12.15□□□□□ -0.46
CNTNAP3B-211ENST00000612828 STIM2Q9P246 746 aa12.15□□□□□ -0.46
CNTNAP3B-211ENST00000612828 APOA4P06727 396 aa12.15□□□□□ -0.46
CNTNAP3B-211ENST00000612828 ITKQ08881 620 aa12.15□□□□□ -0.46
CNTNAP3B-211ENST00000612828 MTERF2Q49AM1 385 aa12.15□□□□□ -0.46
CNTNAP3B-211ENST00000612828 GJC2Q5T442 439 aaPredicted RBP12.15□□□□□ -0.46
CNTNAP3B-211ENST00000612828 NUCKS1Q9H1E3 243 aaKnown RBP12.15□□□□□ -0.46
CNTNAP3B-211ENST00000612828 LMOD1P29536 600 aaPredicted RBP12.15□□□□□ -0.46
CNTNAP3B-211ENST00000612828 BBOF1Q8ND07 529 aa12.15□□□□□ -0.46
CNTNAP3B-211ENST00000612828 NOP56O00567 594 aaKnown RBP12.15□□□□□ -0.47
CNTNAP3B-211ENST00000612828 OATP04181 439 aa12.15□□□□□ -0.47
CNTNAP3B-211ENST00000612828 GNAI2P04899 355 aa12.15□□□□□ -0.47
CNTNAP3B-211ENST00000612828 NXNQ6DKJ4 435 aa12.15□□□□□ -0.47
CNTNAP3B-211ENST00000612828 ZSCAN30Q86W11 494 aa12.15□□□□□ -0.47
CNTNAP3B-211ENST00000612828 TBC1D32Q96NH3 1257 aa12.15□□□□□ -0.47
CNTNAP3B-211ENST00000612828 VCX3BQ9H321 246 aa12.15□□□□□ -0.47
CNTNAP3B-211ENST00000612828 CNOT7Q9UIV1 285 aaKnown RBP12.15□□□□□ -0.47
CNTNAP3B-211ENST00000612828 CCDC192P0DO97 292 aa12.14□□□□□ -0.47
CNTNAP3B-211ENST00000612828 SIX5Q8N196 739 aa12.14□□□□□ -0.47
CNTNAP3B-211ENST00000612828 CAMK4Q16566 473 aa12.14□□□□□ -0.47
CNTNAP3B-211ENST00000612828 EMILIN1Q9Y6C2 1016 aa12.14□□□□□ -0.47
CNTNAP3B-211ENST00000612828 RLBP1P12271 317 aa12.14□□□□□ -0.47
CNTNAP3B-211ENST00000612828 LMNB2Q03252 620 aa12.14□□□□□ -0.47
CNTNAP3B-211ENST00000612828 ANGPT1Q15389 498 aa12.14□□□□□ -0.47
CNTNAP3B-211ENST00000612828 DNAJC21Q5F1R6 531 aaKnown RBP12.14□□□□□ -0.47
CNTNAP3B-211ENST00000612828 F6X3S4 739 aa12.14□□□□□ -0.47
CNTNAP3B-211ENST00000612828 LZTS3O60299 673 aaPredicted RBP12.14□□□□□ -0.47
CNTNAP3B-211ENST00000612828 URI1O94763 535 aaPredicted RBP12.14□□□□□ -0.47
CNTNAP3B-211ENST00000612828 ZNF75DP51815 510 aa12.14□□□□□ -0.47
CNTNAP3B-211ENST00000612828 C16orf72Q14CZ0 275 aa12.14□□□□□ -0.47
CNTNAP3B-211ENST00000612828 CCDC40Q4G0X9 1142 aa12.14□□□□□ -0.47
CNTNAP3B-211ENST00000612828 MYSM1Q5VVJ2 828 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms