RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 C4AP0C0L4 1744 aa10.8□□□□□ -0.68
CCDC47-207ENST00000612558 IGHMBP2P38935 993 aaKnown RBP10.8□□□□□ -0.68
CCDC47-207ENST00000612558 CCDC158Q5M9N0 1113 aa10.8□□□□□ -0.68
CCDC47-207ENST00000612558 DDX27Q96GQ7 796 aaKnown RBP10.8□□□□□ -0.68
CCDC47-207ENST00000612558 CDC5LQ99459 802 aaKnown RBP10.8□□□□□ -0.68
CCDC47-207ENST00000612558 MPHOSPH8Q99549 860 aa10.8□□□□□ -0.68
CCDC47-207ENST00000612558 HAUS7Q99871 368 aa10.8□□□□□ -0.68
CCDC47-207ENST00000612558 SEC31BQ9NQW1 1179 aa10.8□□□□□ -0.68
CCDC47-207ENST00000612558 DIAPH3Q9NSV4 1193 aa10.8□□□□□ -0.68
CCDC47-207ENST00000612558 SGSM2O43147 1006 aa10.79□□□□□ -0.68
CCDC47-207ENST00000612558 PDE8BO95263 885 aa10.79□□□□□ -0.68
CCDC47-207ENST00000612558 ATP2B3Q16720 1220 aa10.79□□□□□ -0.68
CCDC47-207ENST00000612558 TICAM2Q86XR7 235 aa10.79□□□□□ -0.68
CCDC47-207ENST00000612558 VGLL2Q8N8G2 317 aa10.79□□□□□ -0.68
CCDC47-207ENST00000612558 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.79□□□□□ -0.68
CCDC47-207ENST00000612558 XAGE2Q96GT9 111 aa10.79□□□□□ -0.68
CCDC47-207ENST00000612558 NLRP3Q96P20 1036 aa10.79□□□□□ -0.68
CCDC47-207ENST00000612558 LARP6Q9BRS8 491 aaKnown RBP10.79□□□□□ -0.68
CCDC47-207ENST00000612558 COL24A1Q17RW2 1714 aa10.79□□□□□ -0.68
CCDC47-207ENST00000612558 CARMIL3Q8ND23 1372 aa10.79□□□□□ -0.68
CCDC47-207ENST00000612558 RIC1Q4ADV7 1423 aa10.79□□□□□ -0.68
CCDC47-207ENST00000612558 NFIXQ14938 502 aa10.78□□□□□ -0.68
CCDC47-207ENST00000612558 GORABQ5T7V8 394 aa10.78□□□□□ -0.68
CCDC47-207ENST00000612558 CWC27Q6UX04 472 aaKnown RBP10.78□□□□□ -0.68
CCDC47-207ENST00000612558 KIF2CQ99661 725 aa10.78□□□□□ -0.68
CCDC47-207ENST00000612558 FSD1Q9BTV5 496 aa10.78□□□□□ -0.68
CCDC47-207ENST00000612558 ANO2Q9NQ90 1003 aa10.78□□□□□ -0.68
CCDC47-207ENST00000612558 IFIT1P09914 478 aaKnown RBP10.77□□□□□ -0.68
CCDC47-207ENST00000612558 GYS1P13807 737 aa10.77□□□□□ -0.68
CCDC47-207ENST00000612558 MCCP23508 829 aa10.77□□□□□ -0.68
CCDC47-207ENST00000612558 PUM3Q15397 648 aaKnown RBP10.77□□□□□ -0.68
CCDC47-207ENST00000612558 TTC39AQ5SRH9 613 aa10.77□□□□□ -0.68
CCDC47-207ENST00000612558 KIAA1211Q6ZU35 1233 aa10.77□□□□□ -0.68
CCDC47-207ENST00000612558 ADAM33Q9BZ11 813 aa10.77□□□□□ -0.68
CCDC47-207ENST00000612558 LRP5O75197 1615 aa10.77□□□□□ -0.68
CCDC47-207ENST00000612558 ABCC12Q96J65 1359 aa10.77□□□□□ -0.69
CCDC47-207ENST00000612558 NPHP1O15259 732 aa10.77□□□□□ -0.69
CCDC47-207ENST00000612558 ADORA1P30542 326 aa10.77□□□□□ -0.69
CCDC47-207ENST00000612558 ERICH6Q7L0X2 663 aa10.77□□□□□ -0.69
CCDC47-207ENST00000612558 ANKRD18AQ8IVF6 992 aa10.77□□□□□ -0.69
CCDC47-207ENST00000612558 LPIN2Q92539 896 aa10.77□□□□□ -0.69
CCDC47-207ENST00000612558 ZNF512BQ96KM6 892 aaPredicted RBP10.77□□□□□ -0.69
CCDC47-207ENST00000612558 DNAJC2Q99543 621 aaKnown RBP10.77□□□□□ -0.69
CCDC47-207ENST00000612558 IRX2Q9BZI1 471 aaPredicted RBP10.77□□□□□ -0.69
CCDC47-207ENST00000612558 IL25Q9H293 177 aa10.77□□□□□ -0.69
CCDC47-207ENST00000612558 BSDC1Q9NW68 430 aaPredicted RBP10.77□□□□□ -0.69
CCDC47-207ENST00000612558 TFCP2L1Q9NZI6 479 aa10.77□□□□□ -0.69
CCDC47-207ENST00000612558 RFX7Q2KHR2 1363 aa10.76□□□□□ -0.69
CCDC47-207ENST00000612558 FGFR2P21802 821 aa10.76□□□□□ -0.69
CCDC47-207ENST00000612558 TM4SF1P30408 202 aa10.76□□□□□ -0.69
CCDC47-207ENST00000612558 SLC4A3P48751 1232 aa10.76□□□□□ -0.69
CCDC47-207ENST00000612558 RABEP1Q15276 862 aa10.76□□□□□ -0.69
CCDC47-207ENST00000612558 CNBD1Q8NA66 436 aa10.76□□□□□ -0.69
CCDC47-207ENST00000612558 KBTBD3Q8NAB2 608 aa10.76□□□□□ -0.69
CCDC47-207ENST00000612558 FLAD1Q8NFF5 587 aa10.76□□□□□ -0.69
CCDC47-207ENST00000612558 SNX21Q969T3 373 aa10.76□□□□□ -0.69
CCDC47-207ENST00000612558 EDC3Q96F86 508 aaKnown RBP10.76□□□□□ -0.69
CCDC47-207ENST00000612558 TBC1D2Q9BYX2 928 aa10.76□□□□□ -0.69
CCDC47-207ENST00000612558 SNRKQ9NRH2 765 aa10.76□□□□□ -0.69
CCDC47-207ENST00000612558 PAG1Q9NWQ8 432 aa10.76□□□□□ -0.69
CCDC47-207ENST00000612558 RAD50Q92878 1312 aa10.76□□□□□ -0.69
CCDC47-207ENST00000612558 SLC5A1P13866 664 aa10.75□□□□□ -0.69
CCDC47-207ENST00000612558 ANAPC15P60006 121 aa10.75□□□□□ -0.69
CCDC47-207ENST00000612558 NMIQ13287 307 aaPredicted RBP10.75□□□□□ -0.69
CCDC47-207ENST00000612558 ANKK1Q8NFD2 765 aa10.75□□□□□ -0.69
CCDC47-207ENST00000612558 HELBQ8NG08 1087 aaPredicted RBP10.75□□□□□ -0.69
CCDC47-207ENST00000612558 LSG1Q9H089 658 aaKnown RBP10.75□□□□□ -0.69
CCDC47-207ENST00000612558 NDUFB9Q9Y6M9 179 aa10.75□□□□□ -0.69
CCDC47-207ENST00000612558 PPP1R3GB7ZBB8 358 aa10.74□□□□□ -0.69
CCDC47-207ENST00000612558 GOLIM4O00461 696 aa10.74□□□□□ -0.69
CCDC47-207ENST00000612558 SERPINB2P05120 415 aa10.74□□□□□ -0.69
CCDC47-207ENST00000612558 RPS8P62241 208 aaKnown RBP10.74□□□□□ -0.69
CCDC47-207ENST00000612558 CHRNDQ07001 517 aa10.74□□□□□ -0.69
CCDC47-207ENST00000612558 ZNF827Q17R98 1081 aa10.74□□□□□ -0.69
CCDC47-207ENST00000612558 DDX46Q7L014 1031 aaKnown RBP10.74□□□□□ -0.69
CCDC47-207ENST00000612558 HSCBQ8IWL3 235 aa10.74□□□□□ -0.69
CCDC47-207ENST00000612558 FAM227BQ96M60 508 aa10.74□□□□□ -0.69
CCDC47-207ENST00000612558 SPEF2Q9C093 1822 aa10.74□□□□□ -0.69
CCDC47-207ENST00000612558 RGPD3A6NKT7 1758 aaPredicted RBP10.73□□□□□ -0.69
CCDC47-207ENST00000612558 TAF5LO75529 589 aa10.73□□□□□ -0.69
CCDC47-207ENST00000612558 UQCRFS1P1P0C7P4 283 aa10.73□□□□□ -0.69
CCDC47-207ENST00000612558 HSPA4P34932 840 aa10.73□□□□□ -0.69
CCDC47-207ENST00000612558 FKBP4Q02790 459 aaKnown RBP eCLIP10.73□□□□□ -0.69
CCDC47-207ENST00000612558 LRRFIP1Q32MZ4 808 aaKnown RBP10.73□□□□□ -0.69
CCDC47-207ENST00000612558 CCDC102BQ68D86 513 aa10.73□□□□□ -0.69
CCDC47-207ENST00000612558 PRR5LQ6MZQ0 368 aa10.73□□□□□ -0.69
CCDC47-207ENST00000612558 RGPD4Q7Z3J3 1758 aa10.73□□□□□ -0.69
CCDC47-207ENST00000612558 NLGN1Q8N2Q7 840 aa10.73□□□□□ -0.69
CCDC47-207ENST00000612558 CCDC24Q8N4L8 307 aa10.73□□□□□ -0.69
CCDC47-207ENST00000612558 CELF1Q92879 486 aaKnown RBP10.73□□□□□ -0.69
CCDC47-207ENST00000612558 IL17RAQ96F46 866 aa10.73□□□□□ -0.69
CCDC47-207ENST00000612558 TNS1Q9HBL0 1735 aaKnown RBP10.73□□□□□ -0.69
CCDC47-207ENST00000612558 RABGEF1Q9UJ41 708 aa10.73□□□□□ -0.69
CCDC47-207ENST00000612558 CASZ1Q86V15 1759 aa10.73□□□□□ -0.69
CCDC47-207ENST00000612558 A0A0D9SFI3 127 aa10.73□□□□□ -0.69
CCDC47-207ENST00000612558 ARID4AP29374 1257 aaPredicted RBP10.73□□□□□ -0.69
CCDC47-207ENST00000612558 ST5P78524 1137 aa10.73□□□□□ -0.69
CCDC47-207ENST00000612558 COL23A1Q86Y22 540 aaPredicted RBP10.73□□□□□ -0.69
CCDC47-207ENST00000612558 IL27Q8NEV9 243 aa10.73□□□□□ -0.69
CCDC47-207ENST00000612558 FBXW7Q969H0 707 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms