RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 SYKP43405 635 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 TRIM28Q13263 835 aaKnown RBP7.38□□□□□ -1.23
SNX13-213ENST00000611725 TSGA10IPQ3SY00 556 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 TMTC2Q8N394 836 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 ZBTB38Q8NAP3 1195 aaPredicted RBP7.38□□□□□ -1.23
SNX13-213ENST00000611725 KRT23Q9C075 422 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 A0A1B0GVL5 298 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 DYNC1I1O14576 645 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 SKILP12757 684 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 PDIA3P30101 505 aaKnown RBP7.38□□□□□ -1.23
SNX13-213ENST00000611725 WTAPQ15007 396 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 CNNM3Q8NE01 707 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 MNS1Q8NEH6 495 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 ESR2Q92731 530 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 PDE8BO95263 885 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 RFX5P48382 616 aaPredicted RBP7.38□□□□□ -1.23
SNX13-213ENST00000611725 PTPN14Q15678 1187 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 SLC4A4Q9Y6R1 1079 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 UTYO14607 1347 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 KIF2AO00139 706 aaPredicted RBP7.38□□□□□ -1.23
SNX13-213ENST00000611725 YEATS4O95619 227 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 TNNT1P13805 278 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 PDE6AP16499 860 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 CYP7A1P22680 504 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 PUM3Q15397 648 aaKnown RBP7.38□□□□□ -1.23
SNX13-213ENST00000611725 IL17RAQ96F46 866 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 ACSBG1Q96GR2 724 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 B4E1Z4 1266 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 CBFA2T2O43439 604 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 GSDMDP57764 484 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 SSRP1Q08945 709 aaKnown RBP7.38□□□□□ -1.23
SNX13-213ENST00000611725 TOB2Q14106 344 aaPredicted RBP7.38□□□□□ -1.23
SNX13-213ENST00000611725 SMARCC1Q92922 1105 aaPredicted RBP7.38□□□□□ -1.23
SNX13-213ENST00000611725 TMEM87BQ96K49 555 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 DACH1Q9UI36 760 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 NRKQ7Z2Y5 1582 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 ADORA1P30542 326 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 SCRN1Q12765 414 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 C17orf53Q8N3J3 647 aaPredicted RBP7.38□□□□□ -1.23
SNX13-213ENST00000611725 MIGA1Q8NAN2 632 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 CBX8Q9HC52 389 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 TAF6LQ9Y6J9 622 aa7.38□□□□□ -1.23
SNX13-213ENST00000611725 ARHGEF28Q8N1W1 1705 aaKnown RBP7.37□□□□□ -1.23
SNX13-213ENST00000611725 IPO7O95373 1038 aaKnown RBP7.37□□□□□ -1.23
SNX13-213ENST00000611725 UBE3CQ15386 1083 aa7.37□□□□□ -1.23
SNX13-213ENST00000611725 USPL1Q5W0Q7 1092 aa7.37□□□□□ -1.23
SNX13-213ENST00000611725 KRT40Q6A162 431 aa7.37□□□□□ -1.23
SNX13-213ENST00000611725 ANKRD18AQ8IVF6 992 aa7.37□□□□□ -1.23
SNX13-213ENST00000611725 CCAR2Q8N163 923 aaKnown RBP7.37□□□□□ -1.23
SNX13-213ENST00000611725 PIGBQ92521 554 aa7.37□□□□□ -1.23
SNX13-213ENST00000611725 GREM2Q9H772 168 aa7.37□□□□□ -1.23
SNX13-213ENST00000611725 MAP3K15Q6ZN16 1313 aa7.37□□□□□ -1.23
SNX13-213ENST00000611725 PXDNLA1KZ92 1463 aa7.37□□□□□ -1.23
SNX13-213ENST00000611725 MARCH6O60337 910 aa7.37□□□□□ -1.23
SNX13-213ENST00000611725 AOPEPQ8N6M6 819 aa7.37□□□□□ -1.23
SNX13-213ENST00000611725 CDCA7Q9BWT1 371 aaPredicted RBP7.37□□□□□ -1.23
SNX13-213ENST00000611725 ADD1P35611 737 aaKnown RBP7.37□□□□□ -1.23
SNX13-213ENST00000611725 BCL11BQ9C0K0 894 aaPredicted RBP7.37□□□□□ -1.23
SNX13-213ENST00000611725 RCOR1Q9UKL0 485 aa7.37□□□□□ -1.23
SNX13-213ENST00000611725 RTN1Q16799 776 aa7.37□□□□□ -1.23
SNX13-213ENST00000611725 TSR1Q2NL82 804 aaKnown RBP7.37□□□□□ -1.23
SNX13-213ENST00000611725 ANO1Q5XXA6 986 aa7.37□□□□□ -1.23
SNX13-213ENST00000611725 CCDC47Q96A33 483 aaKnown RBP7.37□□□□□ -1.23
SNX13-213ENST00000611725 CCDC87Q9NVE4 849 aa7.37□□□□□ -1.23
SNX13-213ENST00000611725 ZNF532Q9HCE3 1301 aa7.37□□□□□ -1.23
SNX13-213ENST00000611725 CHGBP05060 677 aa7.37□□□□□ -1.23
SNX13-213ENST00000611725 GNAT2P19087 354 aa7.37□□□□□ -1.23
SNX13-213ENST00000611725 LMOD1P29536 600 aaPredicted RBP7.37□□□□□ -1.23
SNX13-213ENST00000611725 TXLNAP40222 546 aa7.37□□□□□ -1.23
SNX13-213ENST00000611725 TTLL11Q8NHH1 800 aa7.37□□□□□ -1.23
SNX13-213ENST00000611725 CCP110O43303 1012 aa7.36□□□□□ -1.23
SNX13-213ENST00000611725 DIS3L2Q8IYB7 885 aaKnown RBP7.36□□□□□ -1.23
SNX13-213ENST00000611725 NGLY1Q96IV0 654 aa7.36□□□□□ -1.23
SNX13-213ENST00000611725 GPHNQ9NQX3 736 aaPredicted RBP7.36□□□□□ -1.23
SNX13-213ENST00000611725 CEP131Q9UPN4 1083 aa7.36□□□□□ -1.23
SNX13-213ENST00000611725 G3V3G9 751 aa7.36□□□□□ -1.23
SNX13-213ENST00000611725 DCAF8Q5TAQ9 597 aa7.36□□□□□ -1.23
SNX13-213ENST00000611725 MAGEB6Q8N7X4 407 aa7.36□□□□□ -1.23
SNX13-213ENST00000611725 KCNB2Q92953 911 aa7.36□□□□□ -1.23
SNX13-213ENST00000611725 IL6STP40189 918 aaPredicted RBP7.36□□□□□ -1.23
SNX13-213ENST00000611725 PHKA1P46020 1223 aa7.36□□□□□ -1.23
SNX13-213ENST00000611725 ATG9AQ7Z3C6 839 aa7.36□□□□□ -1.23
SNX13-213ENST00000611725 CATIPQ7Z7H3 387 aa7.36□□□□□ -1.23
SNX13-213ENST00000611725 KIF18AQ8NI77 898 aa7.36□□□□□ -1.23
SNX13-213ENST00000611725 NLRP3Q96P20 1036 aa7.36□□□□□ -1.23
SNX13-213ENST00000611725 NR1I2O75469 434 aa7.36□□□□□ -1.23
SNX13-213ENST00000611725 NLRP10Q86W26 655 aa7.36□□□□□ -1.23
SNX13-213ENST00000611725 PDCL2Q8N4E4 241 aa7.36□□□□□ -1.23
SNX13-213ENST00000611725 ISCA1Q9BUE6 129 aa7.36□□□□□ -1.23
SNX13-213ENST00000611725 TRMT1Q9NXH9 659 aaKnown RBP7.36□□□□□ -1.23
SNX13-213ENST00000611725 MED23Q9ULK4 1368 aa7.36□□□□□ -1.23
SNX13-213ENST00000611725 PRDM1O75626 825 aa7.36□□□□□ -1.23
SNX13-213ENST00000611725 ADALQ6DHV7 355 aa7.36□□□□□ -1.23
SNX13-213ENST00000611725 ZPR1O75312 459 aa7.35□□□□□ -1.23
SNX13-213ENST00000611725 CTSWP56202 376 aa7.35□□□□□ -1.23
SNX13-213ENST00000611725 SLFNL1Q499Z3 407 aa7.35□□□□□ -1.23
SNX13-213ENST00000611725 FILIP1LQ4L180 1135 aa7.35□□□□□ -1.23
SNX13-213ENST00000611725 RILPL1Q5EBL4 403 aa7.35□□□□□ -1.23
SNX13-213ENST00000611725 ISM2Q6H9L7 571 aa7.35□□□□□ -1.23
SNX13-213ENST00000611725 TMC6Q7Z403 805 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms