RNA–Protein interactions for RNA: ENST00000610538.4

TP53-219, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-219ENST00000610538 CHMP5Q9NZZ3 219 aa14.73□□□□□ -0.05
TP53-219ENST00000610538 AKAP11Q9UKA4 1901 aa14.73□□□□□ -0.05
TP53-219ENST00000610538 ADD2P35612 726 aa14.73□□□□□ -0.05
TP53-219ENST00000610538 GRAPQ13588 217 aa14.73□□□□□ -0.05
TP53-219ENST00000610538 TTF1Q15361 905 aaPredicted RBP14.73□□□□□ -0.05
TP53-219ENST00000610538 GRAPLQ8TC17 118 aaPredicted RBP14.73□□□□□ -0.05
TP53-219ENST00000610538 PDGFDQ9GZP0 370 aaPredicted RBP14.73□□□□□ -0.05
TP53-219ENST00000610538 LRP2BPQ9P2M1 347 aa14.73□□□□□ -0.05
TP53-219ENST00000610538 NSFL1CQ9UNZ2 370 aaKnown RBP14.73□□□□□ -0.05
TP53-219ENST00000610538 CYP46A1Q9Y6A2 500 aa14.73□□□□□ -0.05
TP53-219ENST00000610538 GPAA1O43292 621 aa14.72□□□□□ -0.05
TP53-219ENST00000610538 PDE6AP16499 860 aa14.72□□□□□ -0.05
TP53-219ENST00000610538 NLGN1Q8N2Q7 840 aa14.72□□□□□ -0.05
TP53-219ENST00000610538 APPBP2Q92624 585 aa14.72□□□□□ -0.05
TP53-219ENST00000610538 PDRG1Q9NUG6 133 aa14.72□□□□□ -0.05
TP53-219ENST00000610538 PNPLA7Q6ZV29 1317 aa14.72□□□□□ -0.05
TP53-219ENST00000610538 LRP5O75197 1615 aa14.72□□□□□ -0.05
TP53-219ENST00000610538 APPP05067 770 aa14.72□□□□□ -0.05
TP53-219ENST00000610538 ZFYP08048 801 aaPredicted RBP14.72□□□□□ -0.05
TP53-219ENST00000610538 PKP1Q13835 747 aa14.72□□□□□ -0.05
TP53-219ENST00000610538 LRRFIP1Q32MZ4 808 aaKnown RBP14.72□□□□□ -0.05
TP53-219ENST00000610538 RUFY3Q7L099 469 aa14.72□□□□□ -0.05
TP53-219ENST00000610538 TTC14Q96N46 770 aa14.72□□□□□ -0.05
TP53-219ENST00000610538 MYO5AQ9Y4I1 1855 aaKnown RBP14.71□□□□□ -0.05
TP53-219ENST00000610538 ZNF804BA4D1E1 1349 aa14.71□□□□□ -0.05
TP53-219ENST00000610538 LRRC2Q9BYS8 371 aa14.71□□□□□ -0.05
TP53-219ENST00000610538 ZSWIM6Q9HCJ5 1215 aa14.71□□□□□ -0.05
TP53-219ENST00000610538 U3KPZ7 1027 aaPredicted RBP14.71□□□□□ -0.05
TP53-219ENST00000610538 LAMB2P55268 1798 aa14.71□□□□□ -0.06
TP53-219ENST00000610538 TNRC6CQ9HCJ0 1690 aaKnown RBP14.71□□□□□ -0.06
TP53-219ENST00000610538 RFX7Q2KHR2 1363 aa14.71□□□□□ -0.06
TP53-219ENST00000610538 FOXP2O15409 715 aa14.71□□□□□ -0.06
TP53-219ENST00000610538 DDIT3P35638 169 aa14.71□□□□□ -0.06
TP53-219ENST00000610538 CHAF1AQ13111 956 aaPredicted RBP14.71□□□□□ -0.06
TP53-219ENST00000610538 FOXD4L5Q5VV16 416 aaPredicted RBP14.71□□□□□ -0.06
TP53-219ENST00000610538 OLFM4Q6UX06 510 aa14.71□□□□□ -0.06
TP53-219ENST00000610538 MIGA1Q8NAN2 632 aa14.71□□□□□ -0.06
TP53-219ENST00000610538 FOXD4L4Q8WXT5 416 aaPredicted RBP14.71□□□□□ -0.06
TP53-219ENST00000610538 KCNB2Q92953 911 aa14.71□□□□□ -0.06
TP53-219ENST00000610538 FGAP02671 866 aa14.7□□□□□ -0.06
TP53-219ENST00000610538 MAP3K12Q12852 859 aa14.7□□□□□ -0.06
TP53-219ENST00000610538 IL17RAQ96F46 866 aa14.7□□□□□ -0.06
TP53-219ENST00000610538 CAMKK2Q96RR4 588 aa14.7□□□□□ -0.06
TP53-219ENST00000610538 COL24A1Q17RW2 1714 aa14.7□□□□□ -0.06
TP53-219ENST00000610538 BLOC1S2Q6QNY1 142 aa14.7□□□□□ -0.06
TP53-219ENST00000610538 CHST3Q7LGC8 479 aa14.7□□□□□ -0.06
TP53-219ENST00000610538 ANKRD2Q9GZV1 360 aa14.7□□□□□ -0.06
TP53-219ENST00000610538 GNL3LQ9NVN8 582 aaKnown RBP14.7□□□□□ -0.06
TP53-219ENST00000610538 RAI14Q9P0K7 980 aa14.7□□□□□ -0.06
TP53-219ENST00000610538 LARGE1O95461 756 aa14.69□□□□□ -0.06
TP53-219ENST00000610538 HIBADHP31937 336 aaKnown RBP14.69□□□□□ -0.06
TP53-219ENST00000610538 CRY2Q49AN0 593 aa14.69□□□□□ -0.06
TP53-219ENST00000610538 STOX1Q6ZVD7 989 aa14.69□□□□□ -0.06
TP53-219ENST00000610538 DSCC1Q9BVC3 393 aa14.69□□□□□ -0.06
TP53-219ENST00000610538 CASZ1Q86V15 1759 aa14.69□□□□□ -0.06
TP53-219ENST00000610538 TCRBV5S4A2TA0A5A2 114 aa14.69□□□□□ -0.06
TP53-219ENST00000610538 MCM2P49736 904 aa14.69□□□□□ -0.06
TP53-219ENST00000610538 ZSCAN25Q6NSZ9 544 aa14.69□□□□□ -0.06
TP53-219ENST00000610538 AIDAQ96BJ3 306 aa14.69□□□□□ -0.06
TP53-219ENST00000610538 PSMA5P28066 241 aa14.68□□□□□ -0.06
TP53-219ENST00000610538 GPSM2P81274 684 aa14.68□□□□□ -0.06
TP53-219ENST00000610538 SLC15A2Q16348 729 aa14.68□□□□□ -0.06
TP53-219ENST00000610538 RBM17Q96I25 401 aaKnown RBP14.68□□□□□ -0.06
TP53-219ENST00000610538 NEK1Q96PY6 1258 aa14.68□□□□□ -0.06
TP53-219ENST00000610538 ARMT1Q9H993 441 aa14.68□□□□□ -0.06
TP53-219ENST00000610538 PARP3Q9Y6F1 533 aa14.68□□□□□ -0.06
TP53-219ENST00000610538 FBXO33Q7Z6M2 555 aa14.68□□□□□ -0.06
TP53-219ENST00000610538 ADGRA1Q86SQ6 560 aa14.68□□□□□ -0.06
TP53-219ENST00000610538 NECAB1Q8N987 351 aa14.68□□□□□ -0.06
TP53-219ENST00000610538 LIMCH1Q9UPQ0 1083 aa14.68□□□□□ -0.06
TP53-219ENST00000610538 MBD4O95243 580 aa14.67□□□□□ -0.06
TP53-219ENST00000610538 UBE3CQ15386 1083 aa14.67□□□□□ -0.06
TP53-219ENST00000610538 STK11IPQ8N1F8 1099 aa14.67□□□□□ -0.06
TP53-219ENST00000610538 TM6SF1Q9BZW5 370 aa14.67□□□□□ -0.06
TP53-219ENST00000610538 PRKAB2O43741 272 aa14.67□□□□□ -0.06
TP53-219ENST00000610538 STK3Q13188 491 aa14.67□□□□□ -0.06
TP53-219ENST00000610538 SF3B2Q13435 895 aaKnown RBP14.67□□□□□ -0.06
TP53-219ENST00000610538 FLAD1Q8NFF5 587 aa14.67□□□□□ -0.06
TP53-219ENST00000610538 TNPO1Q92973 898 aaKnown RBP14.67□□□□□ -0.06
TP53-219ENST00000610538 UFL1O94874 794 aa14.66□□□□□ -0.06
TP53-219ENST00000610538 CYP7A1P22680 504 aa14.66□□□□□ -0.06
TP53-219ENST00000610538 RPS6KB1P23443 525 aa14.66□□□□□ -0.06
TP53-219ENST00000610538 TPCN1Q9ULQ1 816 aa14.66□□□□□ -0.06
TP53-219ENST00000610538 COL1A1P02452 1464 aaPredicted RBP14.66□□□□□ -0.06
TP53-219ENST00000610538 E7EWF7 191 aa14.66□□□□□ -0.06
TP53-219ENST00000610538 FGD1P98174 961 aa14.66□□□□□ -0.06
TP53-219ENST00000610538 CCDC83Q8IWF9 413 aa14.66□□□□□ -0.06
TP53-219ENST00000610538 ZNF622Q969S3 477 aaKnown RBP eCLIP14.66□□□□□ -0.065e-6■□□□□ 11.2
TP53-219ENST00000610538 STRBPQ96SI9 672 aaKnown RBP14.66□□□□□ -0.06
TP53-219ENST00000610538 BRIP1Q9BX63 1249 aa14.66□□□□□ -0.06
TP53-219ENST00000610538 INCENPQ9NQS7 918 aa14.66□□□□□ -0.06
TP53-219ENST00000610538 ZNF219Q9P2Y4 722 aaPredicted RBP14.66□□□□□ -0.06
TP53-219ENST00000610538 DENND2AQ9ULE3 1009 aa14.66□□□□□ -0.06
TP53-219ENST00000610538 RPAP1Q9BWH6 1393 aaPredicted RBP14.66□□□□□ -0.06
TP53-219ENST00000610538 C6orf229H3BNL8 230 aa14.65□□□□□ -0.06
TP53-219ENST00000610538 PRDX5P30044 214 aa14.65□□□□□ -0.06
TP53-219ENST00000610538 ME3Q16798 604 aa14.65□□□□□ -0.06
TP53-219ENST00000610538 TSGA10IPQ3SY00 556 aa14.65□□□□□ -0.06
TP53-219ENST00000610538 CHAMP1Q96JM3 812 aa14.65□□□□□ -0.06
TP53-219ENST00000610538 SRGNP10124 158 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms