RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 EDC3Q96F86 508 aaKnown RBP13.53□□□□□ -0.24
CTCFL-214ENST00000608108 SYT17Q9BSW7 474 aa13.53□□□□□ -0.24
CTCFL-214ENST00000608108 RTFDC1Q9BY42 306 aaPredicted RBP13.53□□□□□ -0.24
CTCFL-214ENST00000608108 PAG1Q9NWQ8 432 aa13.53□□□□□ -0.24
CTCFL-214ENST00000608108 COL1A1P02452 1464 aaPredicted RBP13.53□□□□□ -0.24
CTCFL-214ENST00000608108 DOCK2Q92608 1830 aa13.53□□□□□ -0.24
CTCFL-214ENST00000608108 GOLIM4O00461 696 aa13.53□□□□□ -0.24
CTCFL-214ENST00000608108 RIMBP2O15034 1052 aa13.53□□□□□ -0.24
CTCFL-214ENST00000608108 SUPT20HQ8NEM7 779 aa13.53□□□□□ -0.24
CTCFL-214ENST00000608108 ZC3H12CQ9C0D7 883 aaKnown RBP13.53□□□□□ -0.24
CTCFL-214ENST00000608108 HMG20BQ9P0W2 317 aa13.53□□□□□ -0.24
CTCFL-214ENST00000608108 SEMA3EO15041 775 aa13.52□□□□□ -0.25
CTCFL-214ENST00000608108 CDC45O75419 566 aa13.52□□□□□ -0.25
CTCFL-214ENST00000608108 FRAT2O75474 233 aaPredicted RBP13.52□□□□□ -0.25
CTCFL-214ENST00000608108 ZAP70P43403 619 aa13.52□□□□□ -0.25
CTCFL-214ENST00000608108 PSMD1Q99460 953 aa13.52□□□□□ -0.25
CTCFL-214ENST00000608108 FSD1Q9BTV5 496 aa13.52□□□□□ -0.25
CTCFL-214ENST00000608108 ANTXR1Q9H6X2 564 aa13.51□□□□□ -0.25
CTCFL-214ENST00000608108 CD209Q9NNX6 404 aa13.51□□□□□ -0.25
CTCFL-214ENST00000608108 DENND2AQ9ULE3 1009 aa13.51□□□□□ -0.25
CTCFL-214ENST00000608108 CYP2E1P05181 493 aaPredicted RBP13.5□□□□□ -0.25
CTCFL-214ENST00000608108 IL1R1P14778 569 aa13.5□□□□□ -0.25
CTCFL-214ENST00000608108 C8orf34Q49A92 452 aa13.5□□□□□ -0.25
CTCFL-214ENST00000608108 COA1Q9GZY4 146 aa13.5□□□□□ -0.25
CTCFL-214ENST00000608108 TAOK3Q9H2K8 898 aa13.5□□□□□ -0.25
CTCFL-214ENST00000608108 PDS5AQ29RF7 1337 aaKnown RBP13.5□□□□□ -0.25
CTCFL-214ENST00000608108 G3V3G9 751 aa13.5□□□□□ -0.25
CTCFL-214ENST00000608108 ZBTB22O15209 634 aa13.5□□□□□ -0.25
CTCFL-214ENST00000608108 PPIP5K2O43314 1243 aa13.5□□□□□ -0.25
CTCFL-214ENST00000608108 KIAA2012Q0VF49 1180 aa13.5□□□□□ -0.25
CTCFL-214ENST00000608108 TTF1Q15361 905 aaPredicted RBP13.5□□□□□ -0.25
CTCFL-214ENST00000608108 AOC3Q16853 763 aa13.5□□□□□ -0.25
CTCFL-214ENST00000608108 DCAF8Q5TAQ9 597 aa13.5□□□□□ -0.25
CTCFL-214ENST00000608108 CASC1Q6TDU7 716 aa13.5□□□□□ -0.25
CTCFL-214ENST00000608108 TBC1D9Q6ZT07 1266 aa13.5□□□□□ -0.25
CTCFL-214ENST00000608108 KBTBD3Q8NAB2 608 aa13.5□□□□□ -0.25
CTCFL-214ENST00000608108 TDRD7Q8NHU6 1098 aaKnown RBP13.5□□□□□ -0.25
CTCFL-214ENST00000608108 SCN9AQ15858 1988 aa13.49□□□□□ -0.25
CTCFL-214ENST00000608108 CCDC88AQ3V6T2 1871 aa13.49□□□□□ -0.25
CTCFL-214ENST00000608108 RFX7Q2KHR2 1363 aa13.49□□□□□ -0.25
CTCFL-214ENST00000608108 CHAF1AQ13111 956 aaPredicted RBP13.49□□□□□ -0.25
CTCFL-214ENST00000608108 DOK7Q18PE1 504 aa13.49□□□□□ -0.25
CTCFL-214ENST00000608108 ZNF277Q9NRM2 450 aaPredicted RBP13.49□□□□□ -0.25
CTCFL-214ENST00000608108 JAG2Q9Y219 1238 aa13.49□□□□□ -0.25
CTCFL-214ENST00000608108 NFKBIEO00221 500 aa13.48□□□□□ -0.25
CTCFL-214ENST00000608108 DBNDD1Q9H9R9 158 aa13.48□□□□□ -0.25
CTCFL-214ENST00000608108 PIH1D3Q9NQM4 214 aaKnown RBP13.48□□□□□ -0.25
CTCFL-214ENST00000608108 DIAPH3Q9NSV4 1193 aa13.48□□□□□ -0.25
CTCFL-214ENST00000608108 MAST2Q6P0Q8 1798 aa13.48□□□□□ -0.25
CTCFL-214ENST00000608108 PSME4Q14997 1843 aa13.47□□□□□ -0.25
CTCFL-214ENST00000608108 HIP1O00291 1037 aa13.47□□□□□ -0.25
CTCFL-214ENST00000608108 ECE2O60344 883 aa13.47□□□□□ -0.25
CTCFL-214ENST00000608108 IDH1O75874 414 aaKnown RBP13.47□□□□□ -0.25
CTCFL-214ENST00000608108 CHMLP26374 656 aa13.47□□□□□ -0.25
CTCFL-214ENST00000608108 LARGE2Q8N3Y3 721 aa13.47□□□□□ -0.25
CTCFL-214ENST00000608108 VPS33BQ9H267 617 aa13.47□□□□□ -0.25
CTCFL-214ENST00000608108 ABCF2Q9UG63 623 aa13.47□□□□□ -0.25
CTCFL-214ENST00000608108 LTBP3Q9NS15 1303 aa13.47□□□□□ -0.25
CTCFL-214ENST00000608108 ZNF646O15015 1829 aaPredicted RBP13.47□□□□□ -0.25
CTCFL-214ENST00000608108 COL4A5P29400 1685 aa13.47□□□□□ -0.25
CTCFL-214ENST00000608108 IARSP41252 1262 aaKnown RBP13.46□□□□□ -0.25
CTCFL-214ENST00000608108 LRRFIP1Q32MZ4 808 aaKnown RBP13.46□□□□□ -0.25
CTCFL-214ENST00000608108 PODNQ7Z5L7 613 aa13.46□□□□□ -0.25
CTCFL-214ENST00000608108 WDR66Q8TBY9 1149 aa13.46□□□□□ -0.25
CTCFL-214ENST00000608108 BACH2Q9BYV9 841 aa13.46□□□□□ -0.25
CTCFL-214ENST00000608108 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.46□□□□□ -0.251e-6■□□□□ 10.8
CTCFL-214ENST00000608108 RASSF7Q02833 373 aa13.46□□□□□ -0.26
CTCFL-214ENST00000608108 TICAM2Q86XR7 235 aa13.46□□□□□ -0.26
CTCFL-214ENST00000608108 ZGPATQ8N5A5 531 aaKnown RBP13.46□□□□□ -0.26
CTCFL-214ENST00000608108 FBXW7Q969H0 707 aa13.46□□□□□ -0.26
CTCFL-214ENST00000608108 LRP2BPQ9P2M1 347 aa13.46□□□□□ -0.26
CTCFL-214ENST00000608108 FAM205AQ6ZU69 1335 aa13.45□□□□□ -0.26
CTCFL-214ENST00000608108 SALL1Q9NSC2 1324 aa13.45□□□□□ -0.26
CTCFL-214ENST00000608108 SBF1O95248 1867 aa13.45□□□□□ -0.26
CTCFL-214ENST00000608108 ZFYP08048 801 aaPredicted RBP13.45□□□□□ -0.26
CTCFL-214ENST00000608108 GTF2IP78347 998 aa13.45□□□□□ -0.26
CTCFL-214ENST00000608108 MAP3K12Q12852 859 aa13.45□□□□□ -0.26
CTCFL-214ENST00000608108 ZSCAN25Q6NSZ9 544 aa13.45□□□□□ -0.26
CTCFL-214ENST00000608108 CWC27Q6UX04 472 aaKnown RBP13.45□□□□□ -0.26
CTCFL-214ENST00000608108 RAI14Q9P0K7 980 aa13.45□□□□□ -0.26
CTCFL-214ENST00000608108 DICER1Q9UPY3 1922 aaKnown RBP13.44□□□□□ -0.26
CTCFL-214ENST00000608108 RNF113AO15541 343 aaKnown RBP13.44□□□□□ -0.26
CTCFL-214ENST00000608108 CHGBP05060 677 aa13.44□□□□□ -0.26
CTCFL-214ENST00000608108 YBX3P16989 372 aaKnown RBP eCLIP13.44□□□□□ -0.262e-8■■■□□ 16
CTCFL-214ENST00000608108 NMIQ13287 307 aaPredicted RBP13.44□□□□□ -0.26
CTCFL-214ENST00000608108 MFSD14BQ5SR56 506 aa13.44□□□□□ -0.26
CTCFL-214ENST00000608108 SLC9C2Q5TAH2 1124 aa13.44□□□□□ -0.26
CTCFL-214ENST00000608108 ERICH6Q7L0X2 663 aa13.44□□□□□ -0.26
CTCFL-214ENST00000608108 NIM1KQ8IY84 436 aa13.44□□□□□ -0.26
CTCFL-214ENST00000608108 TBC1D22AQ8WUA7 517 aa13.44□□□□□ -0.26
CTCFL-214ENST00000608108 FAM227BQ96M60 508 aa13.44□□□□□ -0.26
CTCFL-214ENST00000608108 MYH2Q9UKX2 1941 aa13.43□□□□□ -0.26
CTCFL-214ENST00000608108 A0A0D9SFI3 127 aa13.43□□□□□ -0.26
CTCFL-214ENST00000608108 YDJCA8MPS7 323 aa13.43□□□□□ -0.26
CTCFL-214ENST00000608108 PDE6AP16499 860 aa13.43□□□□□ -0.26
CTCFL-214ENST00000608108 PRDX5P30044 214 aa13.43□□□□□ -0.26
CTCFL-214ENST00000608108 ADD2P35612 726 aa13.43□□□□□ -0.26
CTCFL-214ENST00000608108 SPTY2D1Q68D10 685 aaPredicted RBP13.43□□□□□ -0.26
CTCFL-214ENST00000608108 TTLL5Q6EMB2 1281 aa13.43□□□□□ -0.26
CTCFL-214ENST00000608108 ARHGAP27Q6ZUM4 889 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms