RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 RFX5P48382 616 aaPredicted RBP12.98□□□□□ -0.33
LINC01001-203ENST00000607448 VEGFBP49765 207 aa12.98□□□□□ -0.33
LINC01001-203ENST00000607448 GTF2IP78347 998 aa12.98□□□□□ -0.33
LINC01001-203ENST00000607448 STRIP1Q5VSL9 837 aa12.98□□□□□ -0.33
LINC01001-203ENST00000607448 C15orf52Q6ZUT6 534 aaKnown RBP12.98□□□□□ -0.33
LINC01001-203ENST00000607448 USP48Q86UV5 1035 aa12.98□□□□□ -0.33
LINC01001-203ENST00000607448 ITPRIPQ8IWB1 547 aa12.98□□□□□ -0.33
LINC01001-203ENST00000607448 ARHGAP45Q92619 1136 aa12.98□□□□□ -0.33
LINC01001-203ENST00000607448 MEIS3Q99687 375 aa12.98□□□□□ -0.33
LINC01001-203ENST00000607448 GGA3Q9NZ52 723 aa12.98□□□□□ -0.33
LINC01001-203ENST00000607448 ABT1Q9ULW3 272 aaKnown RBP12.98□□□□□ -0.33
LINC01001-203ENST00000607448 JAG2Q9Y219 1238 aa12.98□□□□□ -0.33
LINC01001-203ENST00000607448 RASSF10A6NK89 507 aa12.98□□□□□ -0.33
LINC01001-203ENST00000607448 CELF2O95319 508 aaKnown RBP12.98□□□□□ -0.33
LINC01001-203ENST00000607448 USP17L8P0C7I0 530 aa12.98□□□□□ -0.33
LINC01001-203ENST00000607448 NFKBIBQ15653 356 aa12.98□□□□□ -0.33
LINC01001-203ENST00000607448 TTLL5Q6EMB2 1281 aa12.98□□□□□ -0.33
LINC01001-203ENST00000607448 CDC37L1Q7L3B6 337 aa12.98□□□□□ -0.33
LINC01001-203ENST00000607448 SMC5Q8IY18 1101 aa12.98□□□□□ -0.33
LINC01001-203ENST00000607448 CERS5Q8N5B7 392 aa12.98□□□□□ -0.33
LINC01001-203ENST00000607448 API5Q9BZZ5 524 aaKnown RBP12.98□□□□□ -0.33
LINC01001-203ENST00000607448 ZNF408Q9H9D4 720 aa12.98□□□□□ -0.33
LINC01001-203ENST00000607448 MYOZ2Q9NPC6 264 aa12.98□□□□□ -0.33
LINC01001-203ENST00000607448 GYG1P46976 350 aa12.97□□□□□ -0.33
LINC01001-203ENST00000607448 VGLL2Q8N8G2 317 aa12.97□□□□□ -0.33
LINC01001-203ENST00000607448 ZBTB40Q9NUA8 1239 aa12.97□□□□□ -0.33
LINC01001-203ENST00000607448 IL1R1P14778 569 aa12.96□□□□□ -0.33
LINC01001-203ENST00000607448 SCARF1Q14162 830 aa12.96□□□□□ -0.33
LINC01001-203ENST00000607448 DEFB115Q30KQ5 88 aa12.96□□□□□ -0.33
LINC01001-203ENST00000607448 NBPF9Q3BBW0 867 aa12.96□□□□□ -0.33
LINC01001-203ENST00000607448 ANGEL2Q5VTE6 544 aaKnown RBP12.96□□□□□ -0.33
LINC01001-203ENST00000607448 KRT26Q7Z3Y9 468 aa12.96□□□□□ -0.33
LINC01001-203ENST00000607448 KIAA0825Q8IV33 1275 aa12.96□□□□□ -0.33
LINC01001-203ENST00000607448 TBC1D32Q96NH3 1257 aa12.96□□□□□ -0.33
LINC01001-203ENST00000607448 LRRFIP2Q9Y608 721 aaKnown RBP12.96□□□□□ -0.33
LINC01001-203ENST00000607448 TLL2Q9Y6L7 1015 aa12.96□□□□□ -0.33
LINC01001-203ENST00000607448 MROH5Q6ZUA9 1318 aa12.95□□□□□ -0.34
LINC01001-203ENST00000607448 UBTFL1P0CB47 393 aaPredicted RBP12.95□□□□□ -0.34
LINC01001-203ENST00000607448 HSPA1AP0DMV8 641 aaKnown RBP12.95□□□□□ -0.34
LINC01001-203ENST00000607448 HSPA1BP0DMV9 641 aaKnown RBP12.95□□□□□ -0.34
LINC01001-203ENST00000607448 SLC4A3P48751 1232 aa12.95□□□□□ -0.34
LINC01001-203ENST00000607448 PTPN12Q05209 780 aaKnown RBP12.95□□□□□ -0.34
LINC01001-203ENST00000607448 INTS3Q68E01 1043 aaKnown RBP12.95□□□□□ -0.34
LINC01001-203ENST00000607448 CYP4F22Q6NT55 531 aa12.95□□□□□ -0.34
LINC01001-203ENST00000607448 ZNF804AQ7Z570 1209 aa12.95□□□□□ -0.34
LINC01001-203ENST00000607448 SAPCD2Q86UD0 394 aa12.95□□□□□ -0.34
LINC01001-203ENST00000607448 TMEM57Q8N5G2 664 aa12.95□□□□□ -0.34
LINC01001-203ENST00000607448 PCDHAC2Q9Y5I4 1007 aa12.95□□□□□ -0.34
LINC01001-203ENST00000607448 MYO3BQ8WXR4 1341 aa12.95□□□□□ -0.34
LINC01001-203ENST00000607448 SASH1O94885 1247 aa12.94□□□□□ -0.34
LINC01001-203ENST00000607448 UBE4AQ14139 1066 aa12.94□□□□□ -0.34
LINC01001-203ENST00000607448 METTL24Q5JXM2 366 aa12.94□□□□□ -0.34
LINC01001-203ENST00000607448 DCPSQ96C86 337 aaKnown RBP12.94□□□□□ -0.34
LINC01001-203ENST00000607448 FAM84BQ96KN1 310 aaPredicted RBP12.94□□□□□ -0.34
LINC01001-203ENST00000607448 WDR33Q9C0J8 1336 aaKnown RBP12.94□□□□□ -0.34
LINC01001-203ENST00000607448 WNT10BO00744 389 aa12.94□□□□□ -0.34
LINC01001-203ENST00000607448 PDE8BO95263 885 aa12.94□□□□□ -0.34
LINC01001-203ENST00000607448 SEC24BO95487 1268 aa12.94□□□□□ -0.34
LINC01001-203ENST00000607448 GRM1Q13255 1194 aa12.94□□□□□ -0.34
LINC01001-203ENST00000607448 ATG9AQ7Z3C6 839 aa12.94□□□□□ -0.34
LINC01001-203ENST00000607448 SIL1Q9H173 461 aa12.94□□□□□ -0.34
LINC01001-203ENST00000607448 IQSEC3Q9UPP2 1182 aaPredicted RBP12.94□□□□□ -0.34
LINC01001-203ENST00000607448 PA2G4Q9UQ80 394 aaKnown RBP12.94□□□□□ -0.34
LINC01001-203ENST00000607448 AOX1Q06278 1338 aa12.93□□□□□ -0.34
LINC01001-203ENST00000607448 F8W031 263 aaPredicted RBP12.93□□□□□ -0.34
LINC01001-203ENST00000607448 PAXIP1Q6ZW49 1069 aaPredicted RBP12.93□□□□□ -0.34
LINC01001-203ENST00000607448 TDRD7Q8NHU6 1098 aaKnown RBP12.93□□□□□ -0.34
LINC01001-203ENST00000607448 EYA2O00167 538 aa12.92□□□□□ -0.34
LINC01001-203ENST00000607448 FGFR2P21802 821 aa12.92□□□□□ -0.34
LINC01001-203ENST00000607448 HIBADHP31937 336 aaKnown RBP12.92□□□□□ -0.34
LINC01001-203ENST00000607448 GRIK5Q16478 980 aa12.92□□□□□ -0.34
LINC01001-203ENST00000607448 PRAMEF18Q5VWM3 479 aa12.92□□□□□ -0.34
LINC01001-203ENST00000607448 SULF1Q8IWU6 871 aa12.92□□□□□ -0.34
LINC01001-203ENST00000607448 OGFOD1Q8N543 542 aa12.92□□□□□ -0.34
LINC01001-203ENST00000607448 CDCA5Q96FF9 252 aa12.92□□□□□ -0.34
LINC01001-203ENST00000607448 ZBED3Q96IU2 234 aaPredicted RBP12.92□□□□□ -0.34
LINC01001-203ENST00000607448 AOC2O75106 756 aa12.91□□□□□ -0.34
LINC01001-203ENST00000607448 NUCB1Q02818 461 aa12.91□□□□□ -0.34
LINC01001-203ENST00000607448 GSE1Q14687 1217 aa12.91□□□□□ -0.34
LINC01001-203ENST00000607448 GCC1Q96CN9 775 aa12.91□□□□□ -0.34
LINC01001-203ENST00000607448 CAPNS2Q96L46 248 aa12.91□□□□□ -0.34
LINC01001-203ENST00000607448 COL1A1P02452 1464 aaPredicted RBP12.91□□□□□ -0.34
LINC01001-203ENST00000607448 PAPPA2Q9BXP8 1791 aa12.91□□□□□ -0.34
LINC01001-203ENST00000607448 FAM205AQ6ZU69 1335 aa12.91□□□□□ -0.34
LINC01001-203ENST00000607448 PITPNM2Q9BZ72 1349 aa12.91□□□□□ -0.34
LINC01001-203ENST00000607448 FOXN1O15353 648 aa12.9□□□□□ -0.34
LINC01001-203ENST00000607448 BCAMP50895 628 aa12.9□□□□□ -0.34
LINC01001-203ENST00000607448 COL13A1Q5TAT6 717 aaPredicted RBP12.9□□□□□ -0.34
LINC01001-203ENST00000607448 FBXO33Q7Z6M2 555 aa12.9□□□□□ -0.34
LINC01001-203ENST00000607448 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.9□□□□□ -0.34
LINC01001-203ENST00000607448 EIF5BO60841 1220 aaKnown RBP12.9□□□□□ -0.35
LINC01001-203ENST00000607448 HUNKP57058 714 aa12.9□□□□□ -0.35
LINC01001-203ENST00000607448 MFSD14BQ5SR56 506 aa12.9□□□□□ -0.35
LINC01001-203ENST00000607448 MOB2Q70IA6 237 aa12.9□□□□□ -0.35
LINC01001-203ENST00000607448 ZIC5Q96T25 663 aa12.9□□□□□ -0.35
LINC01001-203ENST00000607448 GBA2Q9HCG7 927 aaPredicted RBP12.9□□□□□ -0.35
LINC01001-203ENST00000607448 ZBTB7BO15156 539 aaPredicted RBP12.89□□□□□ -0.35
LINC01001-203ENST00000607448 GNAI3P08754 354 aa12.89□□□□□ -0.35
LINC01001-203ENST00000607448 FKBP1AP62942 108 aaKnown RBP12.89□□□□□ -0.35
LINC01001-203ENST00000607448 PUM3Q15397 648 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms