RNA–Protein interactions for RNA: ENST00000606377.6

PAX6-231, Transcript of paired box 6, human

APPRIS P4 TSL 5 BASIC

Gene PAX6, Length 6,901 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-231	ENST00000606377	SP4	Q02446	784 aa		11.34	□□□□□ -0.59
PAX6-231	ENST00000606377	RAB3GAP1	Q15042	981 aa		11.34	□□□□□ -0.59
PAX6-231	ENST00000606377	RUFY3	Q7L099	469 aa		11.34	□□□□□ -0.59
PAX6-231	ENST00000606377	G2E3	Q7L622	706 aa		11.34	□□□□□ -0.59
PAX6-231	ENST00000606377	SPTLC2	O15270	562 aa		11.33	□□□□□ -0.6
PAX6-231	ENST00000606377	AKNAD1	Q5T1N1	836 aa		11.33	□□□□□ -0.6
PAX6-231	ENST00000606377	ZNF790	Q6PG37	636 aa		11.33	□□□□□ -0.6
PAX6-231	ENST00000606377	MAATS1	Q7Z4T9	603 aa		11.33	□□□□□ -0.6
PAX6-231	ENST00000606377	WDR70	Q9NW82	654 aa		11.33	□□□□□ -0.6
PAX6-231	ENST00000606377	CGN	Q9P2M7	1197 aa	Known RBP	11.33	□□□□□ -0.6
PAX6-231	ENST00000606377	PSMA7	O14818	248 aa		11.33	□□□□□ -0.6
PAX6-231	ENST00000606377	DENND2A	Q9ULE3	1009 aa		11.33	□□□□□ -0.6
PAX6-231	ENST00000606377	PTGS1	P23219	599 aa		11.33	□□□□□ -0.6
PAX6-231	ENST00000606377	ARID5A	Q03989	594 aa		11.33	□□□□□ -0.6
PAX6-231	ENST00000606377	KRT79	Q5XKE5	535 aa		11.33	□□□□□ -0.6
PAX6-231	ENST00000606377	ZNF830	Q96NB3	372 aa	Predicted RBP	11.33	□□□□□ -0.6
PAX6-231	ENST00000606377	FERMT1	Q9BQL6	677 aa		11.33	□□□□□ -0.6
PAX6-231	ENST00000606377	LMOD1	P29536	600 aa	Predicted RBP	11.33	□□□□□ -0.6
PAX6-231	ENST00000606377	DNAJC25	Q9H1X3	360 aa		11.33	□□□□□ -0.6
PAX6-231	ENST00000606377	SOS1	Q07889	1333 aa	Predicted RBP	11.33	□□□□□ -0.6
PAX6-231	ENST00000606377	WDR62	O43379	1518 aa		11.33	□□□□□ -0.6
PAX6-231	ENST00000606377	CAVIN2	O95810	425 aa		11.33	□□□□□ -0.6
PAX6-231	ENST00000606377	PARP1	P09874	1014 aa	Known RBP	11.33	□□□□□ -0.6
PAX6-231	ENST00000606377	ORAI2	Q96SN7	254 aa		11.33	□□□□□ -0.6
PAX6-231	ENST00000606377	PTPDC1	A2A3K4	754 aa		11.32	□□□□□ -0.6
PAX6-231	ENST00000606377	PLBD2	Q8NHP8	589 aa		11.32	□□□□□ -0.6
PAX6-231	ENST00000606377	DDX17	Q92841	729 aa	Known RBP	11.32	□□□□□ -0.6
PAX6-231	ENST00000606377	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.32	□□□□□ -0.6
PAX6-231	ENST00000606377	CCDC129	Q6ZRS4	1044 aa		11.32	□□□□□ -0.6
PAX6-231	ENST00000606377	POTEB2	H3BUK9	544 aa		11.32	□□□□□ -0.6
PAX6-231	ENST00000606377	TIMM10	P62072	90 aa		11.32	□□□□□ -0.6
PAX6-231	ENST00000606377	CTR9	Q6PD62	1173 aa		11.32	□□□□□ -0.6
PAX6-231	ENST00000606377	PLEKHM2	Q8IWE5	1019 aa		11.32	□□□□□ -0.6
PAX6-231	ENST00000606377	TEX11	Q8IYF3	940 aa		11.32	□□□□□ -0.6
PAX6-231	ENST00000606377	TESK2	Q96S53	571 aa		11.32	□□□□□ -0.6
PAX6-231	ENST00000606377	TMEM110-MUSTN1	A8MSY1	372 aa		11.32	□□□□□ -0.6
PAX6-231	ENST00000606377	ACTN2	P35609	894 aa		11.32	□□□□□ -0.6
PAX6-231	ENST00000606377	DHX32	Q7L7V1	743 aa	Known RBP	11.32	□□□□□ -0.6
PAX6-231	ENST00000606377	PUS7	Q96PZ0	661 aa	Known RBP	11.32	□□□□□ -0.6
PAX6-231	ENST00000606377	GPCPD1	Q9NPB8	672 aa		11.32	□□□□□ -0.6
PAX6-231	ENST00000606377	PKD2L1	Q9P0L9	805 aa		11.32	□□□□□ -0.6
PAX6-231	ENST00000606377		A0A1B0GUL7	405 aa		11.32	□□□□□ -0.6
PAX6-231	ENST00000606377		B4DLN1	442 aa		11.32	□□□□□ -0.6
PAX6-231	ENST00000606377	MRPL12	P52815	198 aa	Known RBP	11.32	□□□□□ -0.6
PAX6-231	ENST00000606377	SMC1A	Q14683	1233 aa	Known RBP	11.32	□□□□□ -0.6
PAX6-231	ENST00000606377	KIAA0753	Q2KHM9	967 aa		11.32	□□□□□ -0.6
PAX6-231	ENST00000606377	EHBP1	Q8NDI1	1231 aa		11.32	□□□□□ -0.6
PAX6-231	ENST00000606377	ZNF594	Q96JF6	807 aa	Predicted RBP	11.32	□□□□□ -0.6
PAX6-231	ENST00000606377	CHML	P26374	656 aa		11.31	□□□□□ -0.6
PAX6-231	ENST00000606377	CYLC1	P35663	651 aa	Predicted RBP	11.31	□□□□□ -0.6
PAX6-231	ENST00000606377	GJC1	P36383	396 aa		11.31	□□□□□ -0.6
PAX6-231	ENST00000606377	MAP3K9	P80192	1104 aa		11.31	□□□□□ -0.6
PAX6-231	ENST00000606377	ZBTB40	Q9NUA8	1239 aa		11.31	□□□□□ -0.6
PAX6-231	ENST00000606377	FAM98C	Q17RN3	349 aa	Known RBP	11.31	□□□□□ -0.6
PAX6-231	ENST00000606377	METTL22	Q9BUU2	404 aa	Predicted RBP	11.31	□□□□□ -0.6
PAX6-231	ENST00000606377	ARMT1	Q9H993	441 aa		11.31	□□□□□ -0.6
PAX6-231	ENST00000606377	INCENP	Q9NQS7	918 aa		11.31	□□□□□ -0.6
PAX6-231	ENST00000606377	HELLS	Q9NRZ9	838 aa		11.31	□□□□□ -0.6
PAX6-231	ENST00000606377	HOMER2	Q9NSB8	354 aa		11.31	□□□□□ -0.6
PAX6-231	ENST00000606377	RBM28	Q9NW13	759 aa	Known RBP	11.31	□□□□□ -0.6
PAX6-231	ENST00000606377	GNA11	P29992	359 aa		11.31	□□□□□ -0.6
PAX6-231	ENST00000606377	FSD2	A1L4K1	749 aa		11.31	□□□□□ -0.6
PAX6-231	ENST00000606377	HIBADH	P31937	336 aa	Known RBP	11.31	□□□□□ -0.6
PAX6-231	ENST00000606377	EIF6	P56537	245 aa	Known RBP	11.31	□□□□□ -0.6
PAX6-231	ENST00000606377	NCBP1	Q09161	790 aa	Known RBP	11.31	□□□□□ -0.6
PAX6-231	ENST00000606377	RNF187	Q5TA31	235 aa	Predicted RBP	11.31	□□□□□ -0.6
PAX6-231	ENST00000606377	DTHD1	Q6ZMT9	781 aa		11.31	□□□□□ -0.6
PAX6-231	ENST00000606377	LGR6	Q9HBX8	967 aa		11.31	□□□□□ -0.6
PAX6-231	ENST00000606377	PUM3	Q15397	648 aa	Known RBP	11.31	□□□□□ -0.6
PAX6-231	ENST00000606377	KLHDC4	Q8TBB5	520 aa		11.31	□□□□□ -0.6
PAX6-231	ENST00000606377	IMPG2	Q9BZV3	1241 aa		11.31	□□□□□ -0.6
PAX6-231	ENST00000606377	STK32B	Q9NY57	414 aa		11.31	□□□□□ -0.6
PAX6-231	ENST00000606377	STAMBP	O95630	424 aa		11.3	□□□□□ -0.6
PAX6-231	ENST00000606377	STX17	P56962	302 aa		11.3	□□□□□ -0.6
PAX6-231	ENST00000606377	RNF216	Q9NWF9	866 aa	Predicted RBP	11.3	□□□□□ -0.6
PAX6-231	ENST00000606377	TBX22	Q9Y458	520 aa		11.3	□□□□□ -0.6
PAX6-231	ENST00000606377	CCDC24	Q8N4L8	307 aa		11.3	□□□□□ -0.6
PAX6-231	ENST00000606377	TTC6	Q86TZ1	520 aa		11.3	□□□□□ -0.6
PAX6-231	ENST00000606377	TCOF1	Q13428	1488 aa	Known RBP	11.3	□□□□□ -0.6
PAX6-231	ENST00000606377		B4E1Z4	1266 aa		11.3	□□□□□ -0.6
PAX6-231	ENST00000606377	TNNI3K	Q59H18	835 aa		11.3	□□□□□ -0.6
PAX6-231	ENST00000606377	FPGT-TNNI3K	V9GXZ4	949 aa		11.3	□□□□□ -0.6
PAX6-231	ENST00000606377	PIK3C2G	O75747	1445 aa		11.3	□□□□□ -0.6
PAX6-231	ENST00000606377	PDE8A	O60658	829 aa		11.3	□□□□□ -0.6
PAX6-231	ENST00000606377	A1BG	P04217	495 aa		11.3	□□□□□ -0.6
PAX6-231	ENST00000606377	TERF1	P54274	439 aa		11.3	□□□□□ -0.6
PAX6-231	ENST00000606377	XAGE2	Q96GT9	111 aa		11.3	□□□□□ -0.6
PAX6-231	ENST00000606377	SBNO1	A3KN83	1393 aa		11.3	□□□□□ -0.6
PAX6-231	ENST00000606377	CFAP43	Q8NDM7	1665 aa		11.29	□□□□□ -0.6
PAX6-231	ENST00000606377	BACH1	O14867	736 aa		11.29	□□□□□ -0.6
PAX6-231	ENST00000606377	TAF5L	O75529	589 aa		11.29	□□□□□ -0.6
PAX6-231	ENST00000606377	CPA1	P15085	419 aa		11.29	□□□□□ -0.6
PAX6-231	ENST00000606377	PRIM1	P49642	420 aa	Known RBP	11.29	□□□□□ -0.6
PAX6-231	ENST00000606377	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.29	□□□□□ -0.6
PAX6-231	ENST00000606377	GGA1	Q9UJY5	639 aa		11.29	□□□□□ -0.6
PAX6-231	ENST00000606377	KIF21A	Q7Z4S6	1674 aa		11.29	□□□□□ -0.6
PAX6-231	ENST00000606377	UHRF1BP1	Q6BDS2	1440 aa		11.29	□□□□□ -0.6
PAX6-231	ENST00000606377	IL13	P35225	146 aa		11.29	□□□□□ -0.6
PAX6-231	ENST00000606377	ZNF174	Q15697	407 aa		11.29	□□□□□ -0.6
PAX6-231	ENST00000606377	PARP10	Q53GL7	1025 aa		11.29	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms