RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 TBC1D22AQ8WUA7 517 aa29.53■■■□□ 2.32
SSX2IP-209ENST00000603677 GGA3Q9NZ52 723 aa29.53■■■□□ 2.32
SSX2IP-209ENST00000603677 TLL2Q9Y6L7 1015 aa29.53■■■□□ 2.32
SSX2IP-209ENST00000603677 SRGAP3O43295 1099 aa29.52■■■□□ 2.32
SSX2IP-209ENST00000603677 CELF2O95319 508 aaKnown RBP29.52■■■□□ 2.32
SSX2IP-209ENST00000603677 GYG1P46976 350 aa29.52■■■□□ 2.32
SSX2IP-209ENST00000603677 USP48Q86UV5 1035 aa29.52■■■□□ 2.32
SSX2IP-209ENST00000603677 ABT1Q9ULW3 272 aaKnown RBP29.52■■■□□ 2.32
SSX2IP-209ENST00000603677 WNT10BO00744 389 aa29.51■■■□□ 2.31
SSX2IP-209ENST00000603677 KIAA0825Q8IV33 1275 aa29.51■■■□□ 2.31
SSX2IP-209ENST00000603677 ECE1P42892 770 aa29.5■■■□□ 2.31
SSX2IP-209ENST00000603677 ZBED3Q96IU2 234 aaPredicted RBP29.5■■■□□ 2.31
SSX2IP-209ENST00000603677 MXD3Q9BW11 206 aa29.5■■■□□ 2.31
SSX2IP-209ENST00000603677 MKRN1Q9UHC7 482 aaKnown RBP29.5■■■□□ 2.31
SSX2IP-209ENST00000603677 SUGT1Q9Y2Z0 365 aa29.5■■■□□ 2.31
SSX2IP-209ENST00000603677 ANGEL2Q5VTE6 544 aaKnown RBP29.49■■■□□ 2.31
SSX2IP-209ENST00000603677 SAPCD2Q86UD0 394 aa29.49■■■□□ 2.31
SSX2IP-209ENST00000603677 CERS5Q8N5B7 392 aa29.49■■■□□ 2.31
SSX2IP-209ENST00000603677 TNNQ9UQP3 1299 aa29.48■■■□□ 2.31
SSX2IP-209ENST00000603677 AKAP2Q9Y2D5 859 aa29.48■■■□□ 2.31
SSX2IP-209ENST00000603677 ZBTB7BO15156 539 aaPredicted RBP29.47■■■□□ 2.31
SSX2IP-209ENST00000603677 FRAT2O75474 233 aaPredicted RBP29.47■■■□□ 2.31
SSX2IP-209ENST00000603677 DLGAP5Q15398 846 aa29.47■■■□□ 2.31
SSX2IP-209ENST00000603677 MFSD14BQ5SR56 506 aa29.47■■■□□ 2.31
SSX2IP-209ENST00000603677 SIL1Q9H173 461 aa29.47■■■□□ 2.31
SSX2IP-209ENST00000603677 FKBP1BP68106 108 aa29.46■■■□□ 2.31
SSX2IP-209ENST00000603677 HDLBPQ00341 1268 aaKnown RBP29.46■■■□□ 2.31
SSX2IP-209ENST00000603677 ATP2B3Q16720 1220 aa29.46■■■□□ 2.31
SSX2IP-209ENST00000603677 NBPF9Q3BBW0 867 aa29.46■■■□□ 2.31
SSX2IP-209ENST00000603677 APOBEC3FQ8IUX4 373 aaKnown RBP29.46■■■□□ 2.31
SSX2IP-209ENST00000603677 MRIQ9BWK5 157 aa29.46■■■□□ 2.31
SSX2IP-209ENST00000603677 CHMP4BQ9H444 224 aaKnown RBP29.46■■■□□ 2.31
SSX2IP-209ENST00000603677 GNL3LQ9NVN8 582 aaKnown RBP29.46■■■□□ 2.31
SSX2IP-209ENST00000603677 MYO1BO43795 1136 aa29.45■■■□□ 2.31
SSX2IP-209ENST00000603677 VEGFBP49765 207 aa29.45■■■□□ 2.31
SSX2IP-209ENST00000603677 FMR1Q06787 632 aaKnown RBP eCLIP29.45■■■□□ 2.31
SSX2IP-209ENST00000603677 ITPRIPQ8IWB1 547 aa29.45■■■□□ 2.31
SSX2IP-209ENST00000603677 C2orf69Q8N8R5 385 aa29.45■■■□□ 2.31
SSX2IP-209ENST00000603677 SERPINA10Q9UK55 444 aa29.45■■■□□ 2.31
SSX2IP-209ENST00000603677 ARAP2Q8WZ64 1704 aa29.45■■■□□ 2.3
SSX2IP-209ENST00000603677 COL1A1P02452 1464 aaPredicted RBP29.44■■■□□ 2.3
SSX2IP-209ENST00000603677 SEMA3EO15041 775 aa29.44■■■□□ 2.3
SSX2IP-209ENST00000603677 RCAN3Q9UKA8 241 aa29.44■■■□□ 2.3
SSX2IP-209ENST00000603677 BCAMP50895 628 aa29.43■■■□□ 2.3
SSX2IP-209ENST00000603677 WDR66Q8TBY9 1149 aa29.43■■■□□ 2.3
SSX2IP-209ENST00000603677 GBA2Q9HCG7 927 aaPredicted RBP29.43■■■□□ 2.3
SSX2IP-209ENST00000603677 PA2G4Q9UQ80 394 aaKnown RBP29.43■■■□□ 2.3
SSX2IP-209ENST00000603677 WDR33Q9C0J8 1336 aaKnown RBP29.43■■■□□ 2.3
SSX2IP-209ENST00000603677 PCNTO95613 3336 aa29.42■■■□□ 2.3
SSX2IP-209ENST00000603677 ADM5C9JUS6 153 aa29.42■■■□□ 2.3
SSX2IP-209ENST00000603677 ATP8B2P98198 1209 aa29.42■■■□□ 2.3
SSX2IP-209ENST00000603677 PPP2R3BQ9Y5P8 575 aa29.42■■■□□ 2.3
SSX2IP-209ENST00000603677 ECM29Q5VYK3 1845 aa29.42■■■□□ 2.3
SSX2IP-209ENST00000603677 MAST3O60307 1309 aa29.42■■■□□ 2.3
SSX2IP-209ENST00000603677 RLBP1P12271 317 aa29.41■■■□□ 2.3
SSX2IP-209ENST00000603677 MAP2K2P36507 400 aa29.41■■■□□ 2.3
SSX2IP-209ENST00000603677 SSH3Q8TE77 659 aa29.41■■■□□ 2.3
SSX2IP-209ENST00000603677 CDCA5Q96FF9 252 aa29.41■■■□□ 2.3
SSX2IP-209ENST00000603677 ZNF408Q9H9D4 720 aa29.41■■■□□ 2.3
SSX2IP-209ENST00000603677 ASTN2O75129 1339 aaPredicted RBP29.41■■■□□ 2.3
SSX2IP-209ENST00000603677 SPDYE2BA6NHP3 402 aa29.4■■■□□ 2.3
SSX2IP-209ENST00000603677 SPDYE6P0CI01 402 aa29.4■■■□□ 2.3
SSX2IP-209ENST00000603677 G3BP1Q13283 466 aaKnown RBP eCLIP29.4■■■□□ 2.3
SSX2IP-209ENST00000603677 POLA2Q14181 598 aa29.4■■■□□ 2.3
SSX2IP-209ENST00000603677 CFAP100Q494V2 611 aa29.4■■■□□ 2.3
SSX2IP-209ENST00000603677 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.4■■■□□ 2.3
SSX2IP-209ENST00000603677 TTF2Q9UNY4 1162 aaKnown RBP29.4■■■□□ 2.3
SSX2IP-209ENST00000603677 NF2P35240 595 aa29.39■■■□□ 2.3
SSX2IP-209ENST00000603677 MAP2K1Q02750 393 aaPredicted RBP29.39■■■□□ 2.3
SSX2IP-209ENST00000603677 CAPNS2Q96L46 248 aa29.39■■■□□ 2.3
SSX2IP-209ENST00000603677 PNMA6EA0A0J9YXQ4 647 aa29.38■■■□□ 2.29
SSX2IP-209ENST00000603677 DENND2AQ9ULE3 1009 aa29.38■■■□□ 2.29
SSX2IP-209ENST00000603677 DDX19BQ9UMR2 479 aa29.38■■■□□ 2.29
SSX2IP-209ENST00000603677 PDS5AQ29RF7 1337 aaKnown RBP29.38■■■□□ 2.29
SSX2IP-209ENST00000603677 MYH13Q9UKX3 1938 aa29.37■■■□□ 2.29
SSX2IP-209ENST00000603677 THSD7BQ9C0I4 1608 aa29.36■■■□□ 2.29
SSX2IP-209ENST00000603677 F8W031 263 aaPredicted RBP29.36■■■□□ 2.29
SSX2IP-209ENST00000603677 HUNKP57058 714 aa29.36■■■□□ 2.29
SSX2IP-209ENST00000603677 CCDC102AQ96A19 550 aa29.36■■■□□ 2.29
SSX2IP-209ENST00000603677 GPR108Q9NPR9 543 aa29.36■■■□□ 2.29
SSX2IP-209ENST00000603677 SALL1Q9NSC2 1324 aa29.36■■■□□ 2.29
SSX2IP-209ENST00000603677 TNFAIP1Q13829 316 aa29.35■■■□□ 2.29
SSX2IP-209ENST00000603677 PDE3AQ14432 1141 aa29.35■■■□□ 2.29
SSX2IP-209ENST00000603677 MVPQ14764 893 aaKnown RBP29.35■■■□□ 2.29
SSX2IP-209ENST00000603677 ZGPATQ8N5A5 531 aaKnown RBP29.35■■■□□ 2.29
SSX2IP-209ENST00000603677 JAG2Q9Y219 1238 aa29.35■■■□□ 2.29
SSX2IP-209ENST00000603677 NOP58Q9Y2X3 529 aaKnown RBP29.35■■■□□ 2.29
SSX2IP-209ENST00000603677 PAPPA2Q9BXP8 1791 aa29.34■■■□□ 2.29
SSX2IP-209ENST00000603677 RBM5P52756 815 aaKnown RBP eCLIP29.34■■■□□ 2.29
SSX2IP-209ENST00000603677 TFCP2Q12800 502 aa29.34■■■□□ 2.29
SSX2IP-209ENST00000603677 CHAF1AQ13111 956 aaPredicted RBP29.34■■■□□ 2.29
SSX2IP-209ENST00000603677 PRMT6Q96LA8 375 aaPredicted RBP29.34■■■□□ 2.29
SSX2IP-209ENST00000603677 IQSEC3Q9UPP2 1182 aaPredicted RBP29.34■■■□□ 2.29
SSX2IP-209ENST00000603677 A0A1B0GUL7 405 aa29.33■■■□□ 2.29
SSX2IP-209ENST00000603677 HSPA1AP0DMV8 641 aaKnown RBP29.33■■■□□ 2.29
SSX2IP-209ENST00000603677 HSPA1BP0DMV9 641 aaKnown RBP29.33■■■□□ 2.29
SSX2IP-209ENST00000603677 CRKP46108 304 aa29.33■■■□□ 2.29
SSX2IP-209ENST00000603677 NOGQ13253 232 aa29.33■■■□□ 2.29
SSX2IP-209ENST00000603677 RGMBQ6NW40 437 aa29.33■■■□□ 2.29
SSX2IP-209ENST00000603677 HHIPL2Q6UWX4 724 aa29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms