RNA–Protein interactions for RNA: ENST00000602897.1

PPFIA3-212, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 1,615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-212ENST00000602897 SNED1Q8TER0 1413 aa26.83■■□□□ 1.89
PPFIA3-212ENST00000602897 GLTPD2A6NH11 291 aa26.83■■□□□ 1.88
PPFIA3-212ENST00000602897 ST18O60284 1047 aa26.83■■□□□ 1.88
PPFIA3-212ENST00000602897 ZFYP08048 801 aaPredicted RBP26.83■■□□□ 1.88
PPFIA3-212ENST00000602897 RPS8P62241 208 aaKnown RBP26.83■■□□□ 1.88
PPFIA3-212ENST00000602897 TTF1Q15361 905 aaPredicted RBP26.83■■□□□ 1.88
PPFIA3-212ENST00000602897 MCMDC2Q4G0Z9 681 aa26.82■■□□□ 1.88
PPFIA3-212ENST00000602897 CCDC171Q6TFL3 1326 aa26.82■■□□□ 1.88
PPFIA3-212ENST00000602897 TIAM2Q8IVF5 1701 aa26.82■■□□□ 1.88
PPFIA3-212ENST00000602897 A0A0D9SFI3 127 aa26.81■■□□□ 1.88
PPFIA3-212ENST00000602897 UBE4AQ14139 1066 aa26.81■■□□□ 1.88
PPFIA3-212ENST00000602897 CCDC102BQ68D86 513 aa26.81■■□□□ 1.88
PPFIA3-212ENST00000602897 DPY19L2Q6NUT2 758 aa26.81■■□□□ 1.88
PPFIA3-212ENST00000602897 HELBQ8NG08 1087 aaPredicted RBP26.81■■□□□ 1.88
PPFIA3-212ENST00000602897 MAP4K1Q92918 833 aa26.81■■□□□ 1.88
PPFIA3-212ENST00000602897 KCNB2Q92953 911 aa26.81■■□□□ 1.88
PPFIA3-212ENST00000602897 IARSP41252 1262 aaKnown RBP26.8■■□□□ 1.88
PPFIA3-212ENST00000602897 SP8Q8IXZ3 490 aa26.8■■□□□ 1.88
PPFIA3-212ENST00000602897 RNF113AO15541 343 aaKnown RBP26.79■■□□□ 1.88
PPFIA3-212ENST00000602897 ANKRD2Q9GZV1 360 aa26.79■■□□□ 1.88
PPFIA3-212ENST00000602897 NDUFB9Q9Y6M9 179 aa26.79■■□□□ 1.88
PPFIA3-212ENST00000602897 K7ELQ4 463 aaPredicted RBP26.79■■□□□ 1.88
PPFIA3-212ENST00000602897 MCM2P49736 904 aa26.79■■□□□ 1.88
PPFIA3-212ENST00000602897 TMC4Q7Z404 712 aa26.79■■□□□ 1.88
PPFIA3-212ENST00000602897 CELF1Q92879 486 aaKnown RBP26.79■■□□□ 1.88
PPFIA3-212ENST00000602897 RRAGCQ9HB90 399 aa26.79■■□□□ 1.88
PPFIA3-212ENST00000602897 MINPP1Q9UNW1 487 aa26.79■■□□□ 1.88
PPFIA3-212ENST00000602897 TAF5LO75529 589 aa26.78■■□□□ 1.88
PPFIA3-212ENST00000602897 ZMYM1Q5SVZ6 1142 aa26.78■■□□□ 1.88
PPFIA3-212ENST00000602897 ZSCAN25Q6NSZ9 544 aa26.78■■□□□ 1.88
PPFIA3-212ENST00000602897 DICER1Q9UPY3 1922 aaKnown RBP26.77■■□□□ 1.88
PPFIA3-212ENST00000602897 PTH1RQ03431 593 aa26.77■■□□□ 1.88
PPFIA3-212ENST00000602897 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.77■■□□□ 1.88
PPFIA3-212ENST00000602897 MCAMP43121 646 aa26.76■■□□□ 1.87
PPFIA3-212ENST00000602897 ZAP70P43403 619 aa26.76■■□□□ 1.87
PPFIA3-212ENST00000602897 NECTIN1Q15223 517 aa26.76■■□□□ 1.87
PPFIA3-212ENST00000602897 PALD1Q9ULE6 856 aa26.76■■□□□ 1.87
PPFIA3-212ENST00000602897 PHKA1P46020 1223 aa26.76■■□□□ 1.87
PPFIA3-212ENST00000602897 SCARF1Q14162 830 aa26.76■■□□□ 1.87
PPFIA3-212ENST00000602897 DPP8Q6V1X1 898 aaPredicted RBP26.76■■□□□ 1.87
PPFIA3-212ENST00000602897 MPNDQ8N594 471 aa26.76■■□□□ 1.87
PPFIA3-212ENST00000602897 AKAP11Q9UKA4 1901 aa26.75■■□□□ 1.87
PPFIA3-212ENST00000602897 RNF20Q5VTR2 975 aa26.75■■□□□ 1.87
PPFIA3-212ENST00000602897 JDP2Q8WYK2 163 aa26.75■■□□□ 1.87
PPFIA3-212ENST00000602897 ANTXR1Q9H6X2 564 aa26.75■■□□□ 1.87
PPFIA3-212ENST00000602897 SNX14Q9Y5W7 946 aa26.75■■□□□ 1.87
PPFIA3-212ENST00000602897 TAF1P21675 1872 aa26.74■■□□□ 1.87
PPFIA3-212ENST00000602897 ZKSCAN1P17029 563 aaPredicted RBP26.74■■□□□ 1.87
PPFIA3-212ENST00000602897 TM6SF1Q9BZW5 370 aa26.74■■□□□ 1.87
PPFIA3-212ENST00000602897 ZBTB22O15209 634 aa26.73■■□□□ 1.87
PPFIA3-212ENST00000602897 TOMM70O94826 608 aa26.73■■□□□ 1.87
PPFIA3-212ENST00000602897 LARGE2Q8N3Y3 721 aa26.73■■□□□ 1.87
PPFIA3-212ENST00000602897 GNL3LQ9NVN8 582 aaKnown RBP26.73■■□□□ 1.87
PPFIA3-212ENST00000602897 HMG20BQ9P0W2 317 aa26.73■■□□□ 1.87
PPFIA3-212ENST00000602897 RBM8AQ9Y5S9 174 aaKnown RBP26.73■■□□□ 1.87
PPFIA3-212ENST00000602897 A0A1B0GUL6 1792 aa26.73■■□□□ 1.87
PPFIA3-212ENST00000602897 DDNO94850 711 aaPredicted RBP26.72■■□□□ 1.87
PPFIA3-212ENST00000602897 VEGFAP15692 232 aaPredicted RBP26.72■■□□□ 1.87
PPFIA3-212ENST00000602897 KCNJ4P48050 445 aa26.72■■□□□ 1.87
PPFIA3-212ENST00000602897 NEK4P51957 841 aa26.72■■□□□ 1.87
PPFIA3-212ENST00000602897 SUPT20HQ8NEM7 779 aa26.72■■□□□ 1.87
PPFIA3-212ENST00000602897 U3KPZ7 1027 aaPredicted RBP26.72■■□□□ 1.87
PPFIA3-212ENST00000602897 COL4A1P02462 1669 aa26.72■■□□□ 1.87
PPFIA3-212ENST00000602897 TSGA10IPQ3SY00 556 aa26.72■■□□□ 1.87
PPFIA3-212ENST00000602897 ZNF589Q86UQ0 364 aaPredicted RBP26.72■■□□□ 1.87
PPFIA3-212ENST00000602897 SPATA5Q8NB90 893 aa26.72■■□□□ 1.87
PPFIA3-212ENST00000602897 RTFDC1Q9BY42 306 aaPredicted RBP26.72■■□□□ 1.87
PPFIA3-212ENST00000602897 PPIP5K2O43314 1243 aa26.71■■□□□ 1.87
PPFIA3-212ENST00000602897 CD2BP2O95400 341 aaKnown RBP26.71■■□□□ 1.87
PPFIA3-212ENST00000602897 CYP2E1P05181 493 aaPredicted RBP26.71■■□□□ 1.87
PPFIA3-212ENST00000602897 DSCC1Q9BVC3 393 aa26.71■■□□□ 1.87
PPFIA3-212ENST00000602897 ZNF804BA4D1E1 1349 aa26.7■■□□□ 1.87
PPFIA3-212ENST00000602897 FZD9O00144 591 aa26.7■■□□□ 1.86
PPFIA3-212ENST00000602897 CAVIN4Q5BKX8 364 aa26.7■■□□□ 1.86
PPFIA3-212ENST00000602897 CREB3L3Q68CJ9 461 aa26.7■■□□□ 1.86
PPFIA3-212ENST00000602897 NSFL1CQ9UNZ2 370 aaKnown RBP26.7■■□□□ 1.86
PPFIA3-212ENST00000602897 ZNF541Q9H0D2 1346 aa26.7■■□□□ 1.86
PPFIA3-212ENST00000602897 UBE3CQ15386 1083 aa26.69■■□□□ 1.86
PPFIA3-212ENST00000602897 AOC3Q16853 763 aa26.69■■□□□ 1.86
PPFIA3-212ENST00000602897 APPBP2Q92624 585 aa26.69■■□□□ 1.86
PPFIA3-212ENST00000602897 VPS33BQ9H267 617 aa26.69■■□□□ 1.86
PPFIA3-212ENST00000602897 SEMA3EO15041 775 aa26.68■■□□□ 1.86
PPFIA3-212ENST00000602897 BCAMP50895 628 aa26.68■■□□□ 1.86
PPFIA3-212ENST00000602897 RASGRF1Q13972 1273 aa26.68■■□□□ 1.86
PPFIA3-212ENST00000602897 NIM1KQ8IY84 436 aa26.68■■□□□ 1.86
PPFIA3-212ENST00000602897 RASEFQ8IZ41 740 aa26.68■■□□□ 1.86
PPFIA3-212ENST00000602897 COL4A5P29400 1685 aa26.67■■□□□ 1.86
PPFIA3-212ENST00000602897 POTECB2RU33 542 aa26.67■■□□□ 1.86
PPFIA3-212ENST00000602897 PSMA5P28066 241 aa26.67■■□□□ 1.86
PPFIA3-212ENST00000602897 PI16Q6UXB8 463 aa26.67■■□□□ 1.86
PPFIA3-212ENST00000602897 SEC62Q99442 399 aaKnown RBP26.67■■□□□ 1.86
PPFIA3-212ENST00000602897 SNAP23O00161 211 aa26.66■■□□□ 1.86
PPFIA3-212ENST00000602897 SLC27A2O14975 620 aa26.66■■□□□ 1.86
PPFIA3-212ENST00000602897 ADD2P35612 726 aa26.66■■□□□ 1.86
PPFIA3-212ENST00000602897 EIF6P56537 245 aaKnown RBP26.66■■□□□ 1.86
PPFIA3-212ENST00000602897 GPSM2P81274 684 aa26.66■■□□□ 1.86
PPFIA3-212ENST00000602897 KRT32Q14532 448 aa26.66■■□□□ 1.86
PPFIA3-212ENST00000602897 PIH1D3Q9NQM4 214 aaKnown RBP26.66■■□□□ 1.86
PPFIA3-212ENST00000602897 LEMD3Q9Y2U8 911 aa26.66■■□□□ 1.86
PPFIA3-212ENST00000602897 MYH7P12883 1935 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms