RNA–Protein interactions for RNA: ENST00000602861.5

HCG18-248, Transcript of HLA complex group 18, humanhuman

TSL 3

Gene HCG18, Length 372 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-248ENST00000602861 RFX1P22670 979 aa9.67□□□□□ -0.86
HCG18-248ENST00000602861 BCAMP50895 628 aa9.67□□□□□ -0.86
HCG18-248ENST00000602861 ITPK1Q13572 414 aa9.67□□□□□ -0.86
HCG18-248ENST00000602861 ANKRD13DQ6ZTN6 518 aa9.67□□□□□ -0.86
HCG18-248ENST00000602861 G2E3Q7L622 706 aa9.67□□□□□ -0.86
HCG18-248ENST00000602861 USB1Q9BQ65 265 aaKnown RBP9.67□□□□□ -0.86
HCG18-248ENST00000602861 ALG2Q9H553 416 aa9.67□□□□□ -0.86
HCG18-248ENST00000602861 TSR3Q9UJK0 312 aaKnown RBP9.67□□□□□ -0.86
HCG18-248ENST00000602861 DDX49Q9Y6V7 483 aaKnown RBP9.67□□□□□ -0.86
HCG18-248ENST00000602861 UBR3Q6ZT12 1888 aa9.67□□□□□ -0.86
HCG18-248ENST00000602861 KDRP35968 1356 aa9.66□□□□□ -0.86
HCG18-248ENST00000602861 ERC2O15083 957 aa9.66□□□□□ -0.86
HCG18-248ENST00000602861 FMNL1O95466 1100 aaPredicted RBP9.66□□□□□ -0.86
HCG18-248ENST00000602861 SOX11P35716 441 aa9.66□□□□□ -0.86
HCG18-248ENST00000602861 NASPP49321 788 aaPredicted RBP9.66□□□□□ -0.86
HCG18-248ENST00000602861 APLP1P51693 650 aa9.66□□□□□ -0.86
HCG18-248ENST00000602861 PDE1AP54750 535 aa9.66□□□□□ -0.86
HCG18-248ENST00000602861 PKP1Q13835 747 aa9.66□□□□□ -0.86
HCG18-248ENST00000602861 MCTP1Q6DN14 999 aa9.66□□□□□ -0.86
HCG18-248ENST00000602861 BRICD5Q6PL45 260 aa9.66□□□□□ -0.86
HCG18-248ENST00000602861 SCUBE3Q8IX30 993 aa9.66□□□□□ -0.86
HCG18-248ENST00000602861 ZGPATQ8N5A5 531 aaKnown RBP9.66□□□□□ -0.86
HCG18-248ENST00000602861 IL17RAQ96F46 866 aa9.66□□□□□ -0.86
HCG18-248ENST00000602861 PCDHB3Q9Y5E6 796 aa9.66□□□□□ -0.86
HCG18-248ENST00000602861 GOLGB1Q14789 3259 aaKnown RBP9.65□□□□□ -0.86
HCG18-248ENST00000602861 PLEKHG2Q9H7P9 1386 aa9.65□□□□□ -0.86
HCG18-248ENST00000602861 NR1I2O75469 434 aa9.65□□□□□ -0.86
HCG18-248ENST00000602861 REC8O95072 547 aa9.65□□□□□ -0.86
HCG18-248ENST00000602861 MMP10P09238 476 aa9.65□□□□□ -0.86
HCG18-248ENST00000602861 CCT4P50991 539 aaKnown RBP9.65□□□□□ -0.86
HCG18-248ENST00000602861 SEMA3FQ13275 785 aa9.65□□□□□ -0.86
HCG18-248ENST00000602861 CASC1Q6TDU7 716 aa9.65□□□□□ -0.86
HCG18-248ENST00000602861 WNT2BQ93097 391 aa9.65□□□□□ -0.86
HCG18-248ENST00000602861 PBXIP1Q96AQ6 731 aa9.65□□□□□ -0.86
HCG18-248ENST00000602861 PPP1R12CQ9BZL4 782 aa9.65□□□□□ -0.86
HCG18-248ENST00000602861 ATG3Q9NT62 314 aa9.65□□□□□ -0.86
HCG18-248ENST00000602861 PXDNLA1KZ92 1463 aa9.65□□□□□ -0.87
HCG18-248ENST00000602861 TCHHQ07283 1943 aa9.64□□□□□ -0.87
HCG18-248ENST00000602861 CICQ96RK0 1608 aaPredicted RBP9.64□□□□□ -0.87
HCG18-248ENST00000602861 HMMRO75330 724 aa9.64□□□□□ -0.87
HCG18-248ENST00000602861 CUL4AQ13619 759 aa9.64□□□□□ -0.87
HCG18-248ENST00000602861 ZSCAN23Q3MJ62 389 aa9.64□□□□□ -0.87
HCG18-248ENST00000602861 ZNF530Q6P9A1 599 aaPredicted RBP9.64□□□□□ -0.87
HCG18-248ENST00000602861 KCTD17Q8N5Z5 321 aa9.64□□□□□ -0.87
HCG18-248ENST00000602861 GPT2Q8TD30 523 aa9.64□□□□□ -0.87
HCG18-248ENST00000602861 TRIM44Q96DX7 344 aaPredicted RBP9.64□□□□□ -0.87
HCG18-248ENST00000602861 PDLIM2Q96JY6 352 aa9.64□□□□□ -0.87
HCG18-248ENST00000602861 RBSNQ9H1K0 784 aa9.64□□□□□ -0.87
HCG18-248ENST00000602861 RTCBQ9Y3I0 505 aaKnown RBP9.64□□□□□ -0.87
HCG18-248ENST00000602861 F6X3S4 739 aa9.63□□□□□ -0.87
HCG18-248ENST00000602861 PDE4CQ08493 712 aa9.63□□□□□ -0.87
HCG18-248ENST00000602861 MTHFSDQ2M296 383 aaKnown RBP9.63□□□□□ -0.87
HCG18-248ENST00000602861 HS1BP3Q53T59 392 aa9.63□□□□□ -0.87
HCG18-248ENST00000602861 CAVIN1Q6NZI2 390 aaKnown RBP9.63□□□□□ -0.87
HCG18-248ENST00000602861 ZSCAN30Q86W11 494 aa9.63□□□□□ -0.87
HCG18-248ENST00000602861 DCAF5Q96JK2 942 aa9.63□□□□□ -0.87
HCG18-248ENST00000602861 ESYT1Q9BSJ8 1104 aa9.63□□□□□ -0.87
HCG18-248ENST00000602861 STAP2Q9UGK3 403 aa9.63□□□□□ -0.87
HCG18-248ENST00000602861 KDM6AO15550 1401 aaPredicted RBP9.63□□□□□ -0.87
HCG18-248ENST00000602861 C10orf71Q711Q0 1435 aa9.63□□□□□ -0.87
HCG18-248ENST00000602861 KDM3BQ7LBC6 1761 aa9.63□□□□□ -0.87
HCG18-248ENST00000602861 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.62□□□□□ -0.87
HCG18-248ENST00000602861 PALM3A6NDB9 673 aaPredicted RBP9.62□□□□□ -0.87
HCG18-248ENST00000602861 ERVV-2B6SEH9 535 aa9.62□□□□□ -0.87
HCG18-248ENST00000602861 TPM2P07951 284 aa9.62□□□□□ -0.87
HCG18-248ENST00000602861 CABP4P57796 275 aa9.62□□□□□ -0.87
HCG18-248ENST00000602861 ATP8B2P98198 1209 aa9.62□□□□□ -0.87
HCG18-248ENST00000602861 PLEKHO1Q53GL0 409 aaPredicted RBP9.62□□□□□ -0.87
HCG18-248ENST00000602861 TRAPPC3LQ5T215 181 aa9.62□□□□□ -0.87
HCG18-248ENST00000602861 THAP11Q96EK4 314 aa9.62□□□□□ -0.87
HCG18-248ENST00000602861 MIS18AQ9NYP9 233 aa9.62□□□□□ -0.87
HCG18-248ENST00000602861 AOX1Q06278 1338 aa9.61□□□□□ -0.87
HCG18-248ENST00000602861 CNTNAP4Q9C0A0 1308 aa9.61□□□□□ -0.87
HCG18-248ENST00000602861 HTATSF1O43719 755 aaKnown RBP9.61□□□□□ -0.87
HCG18-248ENST00000602861 PRPF40AO75400 957 aaKnown RBP9.61□□□□□ -0.87
HCG18-248ENST00000602861 OFD1O75665 1012 aa9.61□□□□□ -0.87
HCG18-248ENST00000602861 BRD1O95696 1058 aa9.61□□□□□ -0.87
HCG18-248ENST00000602861 GNAI2P04899 355 aa9.61□□□□□ -0.87
HCG18-248ENST00000602861 HSPA6P17066 643 aa9.61□□□□□ -0.87
HCG18-248ENST00000602861 JUNDP17535 347 aa9.61□□□□□ -0.87
HCG18-248ENST00000602861 CHMLP26374 656 aa9.61□□□□□ -0.87
HCG18-248ENST00000602861 LMOD1P29536 600 aaPredicted RBP9.61□□□□□ -0.87
HCG18-248ENST00000602861 NR1H3Q13133 447 aa9.61□□□□□ -0.87
HCG18-248ENST00000602861 C1orf141Q5JVX7 400 aa9.61□□□□□ -0.87
HCG18-248ENST00000602861 NLGN1Q8N2Q7 840 aa9.61□□□□□ -0.87
HCG18-248ENST00000602861 TMX3Q96JJ7 454 aa9.61□□□□□ -0.87
HCG18-248ENST00000602861 CHAMP1Q96JM3 812 aa9.61□□□□□ -0.87
HCG18-248ENST00000602861 SLC4A9Q96Q91 983 aa9.61□□□□□ -0.87
HCG18-248ENST00000602861 CCDC87Q9NVE4 849 aa9.61□□□□□ -0.87
HCG18-248ENST00000602861 TMEM63CQ9P1W3 806 aa9.61□□□□□ -0.87
HCG18-248ENST00000602861 TSPYL4Q9UJ04 414 aa9.61□□□□□ -0.87
HCG18-248ENST00000602861 BCS1LQ9Y276 419 aa9.61□□□□□ -0.87
HCG18-248ENST00000602861 A0A0G2JLW4 131 aa9.6□□□□□ -0.87
HCG18-248ENST00000602861 RRP9O43818 475 aaKnown RBP9.6□□□□□ -0.87
HCG18-248ENST00000602861 PTCD1O75127 700 aaKnown RBP9.6□□□□□ -0.87
HCG18-248ENST00000602861 NCLP19338 710 aaKnown RBP9.6□□□□□ -0.87
HCG18-248ENST00000602861 RFC4P35249 363 aa9.6□□□□□ -0.87
HCG18-248ENST00000602861 MCM2P49736 904 aa9.6□□□□□ -0.87
HCG18-248ENST00000602861 ANAPC15P60006 121 aa9.6□□□□□ -0.87
HCG18-248ENST00000602861 TGFB2P61812 414 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms