RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 KLRK1P26718 216 aa14.01□□□□□ -0.17
VRK3-223ENST00000601341 MRE11P49959 708 aa14.01□□□□□ -0.17
VRK3-223ENST00000601341 SLC51AQ86UW1 340 aa14.01□□□□□ -0.17
VRK3-223ENST00000601341 ZBTB22O15209 634 aa14.01□□□□□ -0.17
VRK3-223ENST00000601341 CYP2E1P05181 493 aaPredicted RBP14.01□□□□□ -0.17
VRK3-223ENST00000601341 MCCP23508 829 aa14.01□□□□□ -0.17
VRK3-223ENST00000601341 NMIQ13287 307 aaPredicted RBP14.01□□□□□ -0.17
VRK3-223ENST00000601341 MPNDQ8N594 471 aa14.01□□□□□ -0.17
VRK3-223ENST00000601341 TBC1D16Q8TBP0 767 aa14.01□□□□□ -0.17
VRK3-223ENST00000601341 DENND2AQ9ULE3 1009 aa14.01□□□□□ -0.17
VRK3-223ENST00000601341 RAD50Q92878 1312 aa14□□□□□ -0.17
VRK3-223ENST00000601341 IRS2Q9Y4H2 1338 aa14□□□□□ -0.17
VRK3-223ENST00000601341 COL11A2P13942 1736 aaPredicted RBP14□□□□□ -0.17
VRK3-223ENST00000601341 C6orf229H3BNL8 230 aa14□□□□□ -0.17
VRK3-223ENST00000601341 ZFYP08048 801 aaPredicted RBP14□□□□□ -0.17
VRK3-223ENST00000601341 TGFB2P61812 414 aa14□□□□□ -0.17
VRK3-223ENST00000601341 ZSCAN25Q6NSZ9 544 aa14□□□□□ -0.17
VRK3-223ENST00000601341 DPP8Q6V1X1 898 aaPredicted RBP14□□□□□ -0.17
VRK3-223ENST00000601341 ZNF804AQ7Z570 1209 aa14□□□□□ -0.17
VRK3-223ENST00000601341 TXNRD3Q86VQ6 643 aa14□□□□□ -0.17
VRK3-223ENST00000601341 FAM43AQ8N2R8 423 aa14□□□□□ -0.17
VRK3-223ENST00000601341 DDX24Q9GZR7 859 aaKnown RBP eCLIP14□□□□□ -0.172e-7■■■□□ 18.9
VRK3-223ENST00000601341 POLLQ9UGP5 575 aa14□□□□□ -0.17
VRK3-223ENST00000601341 A0A1B0GUL6 1792 aa14□□□□□ -0.17
VRK3-223ENST00000601341 RNF113AO15541 343 aaKnown RBP13.99□□□□□ -0.17
VRK3-223ENST00000601341 CC2D2BQ6DHV5 1058 aa13.99□□□□□ -0.17
VRK3-223ENST00000601341 KIAA1211Q6ZU35 1233 aa13.99□□□□□ -0.17
VRK3-223ENST00000601341 TTLL6Q8N841 843 aa13.99□□□□□ -0.17
VRK3-223ENST00000601341 FAM227BQ96M60 508 aa13.99□□□□□ -0.17
VRK3-223ENST00000601341 SGIP1Q9BQI5 828 aa13.99□□□□□ -0.17
VRK3-223ENST00000601341 ANO2Q9NQ90 1003 aa13.99□□□□□ -0.17
VRK3-223ENST00000601341 IQSEC3Q9UPP2 1182 aaPredicted RBP13.99□□□□□ -0.17
VRK3-223ENST00000601341 AK9Q5TCS8 1911 aa13.99□□□□□ -0.17
VRK3-223ENST00000601341 A0A0G2JLW4 131 aa13.99□□□□□ -0.17
VRK3-223ENST00000601341 IL25Q9H293 177 aa13.99□□□□□ -0.17
VRK3-223ENST00000601341 PIH1D3Q9NQM4 214 aaKnown RBP13.99□□□□□ -0.17
VRK3-223ENST00000601341 PDS5AQ29RF7 1337 aaKnown RBP13.98□□□□□ -0.17
VRK3-223ENST00000601341 MED23Q9ULK4 1368 aa13.98□□□□□ -0.17
VRK3-223ENST00000601341 LRRC37AA6NMS7 1700 aa13.98□□□□□ -0.17
VRK3-223ENST00000601341 A0A0D9SFI3 127 aa13.98□□□□□ -0.17
VRK3-223ENST00000601341 IDH1O75874 414 aaKnown RBP13.98□□□□□ -0.17
VRK3-223ENST00000601341 DPEP1P16444 411 aa13.98□□□□□ -0.17
VRK3-223ENST00000601341 WASHC4Q2M389 1173 aa13.98□□□□□ -0.17
VRK3-223ENST00000601341 GRIPAP1Q4V328 841 aa13.98□□□□□ -0.17
VRK3-223ENST00000601341 OLFM4Q6UX06 510 aa13.98□□□□□ -0.17
VRK3-223ENST00000601341 C7orf43Q8WVR3 580 aa13.98□□□□□ -0.17
VRK3-223ENST00000601341 HELLSQ9NRZ9 838 aa13.98□□□□□ -0.17
VRK3-223ENST00000601341 MAP3K12Q12852 859 aa13.97□□□□□ -0.17
VRK3-223ENST00000601341 MCMDC2Q4G0Z9 681 aa13.97□□□□□ -0.17
VRK3-223ENST00000601341 ZMYM1Q5SVZ6 1142 aa13.97□□□□□ -0.17
VRK3-223ENST00000601341 GPR101Q96P66 508 aaPredicted RBP13.97□□□□□ -0.17
VRK3-223ENST00000601341 CD2APQ9Y5K6 639 aa13.97□□□□□ -0.17
VRK3-223ENST00000601341 KCNA3P22001 575 aa13.96□□□□□ -0.17
VRK3-223ENST00000601341 PTGER2P43116 358 aa13.96□□□□□ -0.17
VRK3-223ENST00000601341 KLHL40Q2TBA0 621 aa13.96□□□□□ -0.17
VRK3-223ENST00000601341 SLC9C2Q5TAH2 1124 aa13.96□□□□□ -0.17
VRK3-223ENST00000601341 TDRD7Q8NHU6 1098 aaKnown RBP13.96□□□□□ -0.17
VRK3-223ENST00000601341 INTS4Q96HW7 963 aaKnown RBP13.96□□□□□ -0.17
VRK3-223ENST00000601341 EYA3Q99504 573 aa13.96□□□□□ -0.17
VRK3-223ENST00000601341 ZC3H12CQ9C0D7 883 aaKnown RBP13.96□□□□□ -0.17
VRK3-223ENST00000601341 AKAP11Q9UKA4 1901 aa13.96□□□□□ -0.17
VRK3-223ENST00000601341 XRCC6P12956 609 aaKnown RBP eCLIP13.96□□□□□ -0.18
VRK3-223ENST00000601341 UBE3CQ15386 1083 aa13.96□□□□□ -0.18
VRK3-223ENST00000601341 LSG1Q9H089 658 aaKnown RBP13.96□□□□□ -0.18
VRK3-223ENST00000601341 CD209Q9NNX6 404 aa13.96□□□□□ -0.18
VRK3-223ENST00000601341 PIM2Q9P1W9 311 aa13.96□□□□□ -0.18
VRK3-223ENST00000601341 LRP2BPQ9P2M1 347 aa13.96□□□□□ -0.18
VRK3-223ENST00000601341 ZNF219Q9P2Y4 722 aaPredicted RBP13.96□□□□□ -0.18
VRK3-223ENST00000601341 PPP1R1BQ9UD71 204 aaPredicted RBP13.96□□□□□ -0.18
VRK3-223ENST00000601341 BAG4O95429 457 aaKnown RBP13.95□□□□□ -0.18
VRK3-223ENST00000601341 CHGBP05060 677 aa13.95□□□□□ -0.18
VRK3-223ENST00000601341 IL1R1P14778 569 aa13.95□□□□□ -0.18
VRK3-223ENST00000601341 ADD2P35612 726 aa13.95□□□□□ -0.18
VRK3-223ENST00000601341 APPBP2Q92624 585 aa13.95□□□□□ -0.18
VRK3-223ENST00000601341 RTFDC1Q9BY42 306 aaPredicted RBP13.95□□□□□ -0.18
VRK3-223ENST00000601341 COA1Q9GZY4 146 aa13.95□□□□□ -0.18
VRK3-223ENST00000601341 SPON1Q9HCB6 807 aa13.95□□□□□ -0.18
VRK3-223ENST00000601341 ABCF2Q9UG63 623 aa13.95□□□□□ -0.18
VRK3-223ENST00000601341 RIMBP2O15034 1052 aa13.94□□□□□ -0.18
VRK3-223ENST00000601341 C21orf2O43822 256 aa13.94□□□□□ -0.18
VRK3-223ENST00000601341 PDE6AP16499 860 aa13.94□□□□□ -0.18
VRK3-223ENST00000601341 CHAF1AQ13111 956 aaPredicted RBP13.94□□□□□ -0.18
VRK3-223ENST00000601341 CUL4AQ13619 759 aa13.94□□□□□ -0.18
VRK3-223ENST00000601341 WDR66Q8TBY9 1149 aa13.94□□□□□ -0.18
VRK3-223ENST00000601341 COL1A1P02452 1464 aaPredicted RBP13.94□□□□□ -0.18
VRK3-223ENST00000601341 LTBP1Q14766 1721 aa13.94□□□□□ -0.18
VRK3-223ENST00000601341 KIF13BQ9NQT8 1826 aa13.94□□□□□ -0.18
VRK3-223ENST00000601341 IGSF3O75054 1194 aa13.94□□□□□ -0.18
VRK3-223ENST00000601341 CCDC93Q567U6 631 aa13.94□□□□□ -0.18
VRK3-223ENST00000601341 SOGA3Q5TF21 947 aa13.94□□□□□ -0.18
VRK3-223ENST00000601341 ZNF589Q86UQ0 364 aaPredicted RBP13.94□□□□□ -0.18
VRK3-223ENST00000601341 RTKN2Q8IZC4 609 aa13.94□□□□□ -0.18
VRK3-223ENST00000601341 ZGPATQ8N5A5 531 aaKnown RBP13.94□□□□□ -0.18
VRK3-223ENST00000601341 SUPT20HQ8NEM7 779 aa13.94□□□□□ -0.18
VRK3-223ENST00000601341 OSBP2Q969R2 916 aa13.94□□□□□ -0.18
VRK3-223ENST00000601341 SEC62Q99442 399 aaKnown RBP13.94□□□□□ -0.18
VRK3-223ENST00000601341 WWC3Q9ULE0 1092 aa13.94□□□□□ -0.18
VRK3-223ENST00000601341 CCDC171Q6TFL3 1326 aa13.93□□□□□ -0.18
VRK3-223ENST00000601341 SLX4Q8IY92 1834 aa13.93□□□□□ -0.18
VRK3-223ENST00000601341 SLFNL1Q499Z3 407 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms