RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 CTDNEP1O95476 244 aa18.54■□□□□ 0.56
SYDE1-204ENST00000600440 AIMP1Q12904 312 aaKnown RBP18.54■□□□□ 0.56
SYDE1-204ENST00000600440 BEND3Q5T5X7 828 aa18.54■□□□□ 0.56
SYDE1-204ENST00000600440 PNKPQ96T60 521 aa18.54■□□□□ 0.56
SYDE1-204ENST00000600440 NCAPGQ9BPX3 1015 aa18.54■□□□□ 0.56
SYDE1-204ENST00000600440 YY1AP1Q9H869 796 aa18.54■□□□□ 0.56
SYDE1-204ENST00000600440 AKAP2Q9Y2D5 859 aa18.54■□□□□ 0.56
SYDE1-204ENST00000600440 ILDR1Q86SU0 546 aaPredicted RBP18.53■□□□□ 0.56
SYDE1-204ENST00000600440 A0A0U1RQJ8 604 aa18.53■□□□□ 0.56
SYDE1-204ENST00000600440 CCDC151A5D8V7 595 aa18.53■□□□□ 0.56
SYDE1-204ENST00000600440 EIF3JO75822 258 aaKnown RBP18.53■□□□□ 0.56
SYDE1-204ENST00000600440 RSRC2Q7L4I2 434 aaKnown RBP18.53■□□□□ 0.56
SYDE1-204ENST00000600440 HDXQ7Z353 690 aa18.53■□□□□ 0.56
SYDE1-204ENST00000600440 ATRIPQ8WXE1 791 aa18.53■□□□□ 0.56
SYDE1-204ENST00000600440 HMG20BQ9P0W2 317 aa18.53■□□□□ 0.56
SYDE1-204ENST00000600440 ADGRL3Q9HAR2 1447 aa18.53■□□□□ 0.56
SYDE1-204ENST00000600440 ARHGAP6O43182 974 aa18.53■□□□□ 0.56
SYDE1-204ENST00000600440 SASH1O94885 1247 aa18.53■□□□□ 0.56
SYDE1-204ENST00000600440 PNOCQ13519 176 aa18.53■□□□□ 0.56
SYDE1-204ENST00000600440 ADALQ6DHV7 355 aa18.53■□□□□ 0.56
SYDE1-204ENST00000600440 ARHGEF10O15013 1369 aa18.52■□□□□ 0.56
SYDE1-204ENST00000600440 SPTLC2O15270 562 aa18.52■□□□□ 0.56
SYDE1-204ENST00000600440 KRT32Q14532 448 aa18.52■□□□□ 0.56
SYDE1-204ENST00000600440 SYNE3Q6ZMZ3 975 aa18.52■□□□□ 0.56
SYDE1-204ENST00000600440 PPM1EQ8WY54 764 aa18.52■□□□□ 0.56
SYDE1-204ENST00000600440 RIMS1Q86UR5 1692 aaKnown RBP18.52■□□□□ 0.56
SYDE1-204ENST00000600440 A0A0G2JLW4 131 aa18.52■□□□□ 0.55
SYDE1-204ENST00000600440 KCNQ3O43525 872 aa18.52■□□□□ 0.55
SYDE1-204ENST00000600440 MYCNP04198 464 aaPredicted RBP18.52■□□□□ 0.55
SYDE1-204ENST00000600440 KIF4BQ2VIQ3 1234 aa18.52■□□□□ 0.55
SYDE1-204ENST00000600440 NAA16Q6N069 864 aaPredicted RBP18.52■□□□□ 0.55
SYDE1-204ENST00000600440 DDX46Q7L014 1031 aaKnown RBP18.52■□□□□ 0.55
SYDE1-204ENST00000600440 FAM204AQ9H8W3 233 aa18.52■□□□□ 0.55
SYDE1-204ENST00000600440 CBFA2T2O43439 604 aa18.51■□□□□ 0.55
SYDE1-204ENST00000600440 PFKFB1P16118 471 aa18.51■□□□□ 0.55
SYDE1-204ENST00000600440 ATP2B1P20020 1258 aa18.51■□□□□ 0.55
SYDE1-204ENST00000600440 LIG3P49916 1009 aa18.51■□□□□ 0.55
SYDE1-204ENST00000600440 GPHNQ9NQX3 736 aaPredicted RBP18.51■□□□□ 0.55
SYDE1-204ENST00000600440 MAP3K2Q9Y2U5 619 aa18.51■□□□□ 0.55
SYDE1-204ENST00000600440 IBSPP21815 317 aaPredicted RBP18.51■□□□□ 0.55
SYDE1-204ENST00000600440 KCNJ6P48051 423 aa18.51■□□□□ 0.55
SYDE1-204ENST00000600440 MYL5Q02045 173 aa18.51■□□□□ 0.55
SYDE1-204ENST00000600440 STOX1Q6ZVD7 989 aa18.51■□□□□ 0.55
SYDE1-204ENST00000600440 MRPL44Q9H9J2 332 aaKnown RBP18.51■□□□□ 0.55
SYDE1-204ENST00000600440 PSD3Q9NYI0 1048 aa18.51■□□□□ 0.55
SYDE1-204ENST00000600440 USP42Q9H9J4 1324 aaKnown RBP18.5■□□□□ 0.55
SYDE1-204ENST00000600440 LRRC31Q6UY01 552 aa18.5■□□□□ 0.55
SYDE1-204ENST00000600440 VSTM4Q8IW00 320 aa18.5■□□□□ 0.55
SYDE1-204ENST00000600440 ERLIN1O75477 346 aa18.5■□□□□ 0.55
SYDE1-204ENST00000600440 MNAT1P51948 309 aa18.5■□□□□ 0.55
SYDE1-204ENST00000600440 BEND6Q5SZJ8 279 aaPredicted RBP18.5■□□□□ 0.55
SYDE1-204ENST00000600440 TRMT44Q8IYL2 757 aaKnown RBP18.5■□□□□ 0.55
SYDE1-204ENST00000600440 LINC00301Q8NCQ3 95 aa18.5■□□□□ 0.55
SYDE1-204ENST00000600440 SIGLEC1Q9BZZ2 1709 aa18.5■□□□□ 0.55
SYDE1-204ENST00000600440 BRD3Q15059 726 aa18.49■□□□□ 0.55
SYDE1-204ENST00000600440 TSGA10IPQ3SY00 556 aa18.49■□□□□ 0.55
SYDE1-204ENST00000600440 OLFM4Q6UX06 510 aa18.49■□□□□ 0.55
SYDE1-204ENST00000600440 ACEP12821 1306 aa18.49■□□□□ 0.55
SYDE1-204ENST00000600440 NPM1P06748 294 aaKnown RBP eCLIP18.49■□□□□ 0.55
SYDE1-204ENST00000600440 ZNF569Q5MCW4 686 aa18.49■□□□□ 0.55
SYDE1-204ENST00000600440 ANKZF1Q9H8Y5 726 aa18.49■□□□□ 0.55
SYDE1-204ENST00000600440 SOWAHDA6NJG2 315 aa18.48■□□□□ 0.55
SYDE1-204ENST00000600440 PFKFB2O60825 505 aa18.48■□□□□ 0.55
SYDE1-204ENST00000600440 VSNL1P62760 191 aa18.48■□□□□ 0.55
SYDE1-204ENST00000600440 SMARCC2Q8TAQ2 1214 aa18.48■□□□□ 0.55
SYDE1-204ENST00000600440 HINFPQ9BQA5 517 aa18.48■□□□□ 0.55
SYDE1-204ENST00000600440 HSD3B7Q9H2F3 369 aa18.48■□□□□ 0.55
SYDE1-204ENST00000600440 MAP2K7O14733 419 aa18.48■□□□□ 0.55
SYDE1-204ENST00000600440 SYKP43405 635 aa18.48■□□□□ 0.55
SYDE1-204ENST00000600440 AKAP17AQ02040 695 aaKnown RBP18.48■□□□□ 0.55
SYDE1-204ENST00000600440 CASP8Q14790 479 aa18.48■□□□□ 0.55
SYDE1-204ENST00000600440 KIFC2Q96AC6 838 aa18.48■□□□□ 0.55
SYDE1-204ENST00000600440 C8orf76Q96K31 380 aa18.48■□□□□ 0.55
SYDE1-204ENST00000600440 BRMS1Q9HCU9 246 aa18.48■□□□□ 0.55
SYDE1-204ENST00000600440 PIK3C2BO00750 1634 aa18.48■□□□□ 0.55
SYDE1-204ENST00000600440 PRR36Q9H6K5 1346 aa18.48■□□□□ 0.55
SYDE1-204ENST00000600440 SPECC1Q5M775 1068 aa18.48■□□□□ 0.55
SYDE1-204ENST00000600440 RIN2Q8WYP3 895 aaPredicted RBP18.48■□□□□ 0.55
SYDE1-204ENST00000600440 MYO5BQ9ULV0 1848 aa18.47■□□□□ 0.55
SYDE1-204ENST00000600440 ZNF827Q17R98 1081 aa18.47■□□□□ 0.55
SYDE1-204ENST00000600440 SRGAP1Q7Z6B7 1085 aa18.47■□□□□ 0.55
SYDE1-204ENST00000600440 CUTAO60888 179 aa18.47■□□□□ 0.55
SYDE1-204ENST00000600440 CORO7P57737 925 aa18.47■□□□□ 0.55
SYDE1-204ENST00000600440 COL15A1P39059 1388 aa18.47■□□□□ 0.55
SYDE1-204ENST00000600440 IQUBQ8NA54 791 aa18.46■□□□□ 0.55
SYDE1-204ENST00000600440 SUCLG2Q96I99 432 aa18.46■□□□□ 0.55
SYDE1-204ENST00000600440 LONRF3Q496Y0 759 aa18.46■□□□□ 0.55
SYDE1-204ENST00000600440 DHX32Q7L7V1 743 aaKnown RBP18.46■□□□□ 0.55
SYDE1-204ENST00000600440 TMEM139Q8IV31 216 aa18.46■□□□□ 0.55
SYDE1-204ENST00000600440 DHX8Q14562 1220 aaKnown RBP18.46■□□□□ 0.54
SYDE1-204ENST00000600440 KCNG4Q8TDN1 519 aa18.46■□□□□ 0.54
SYDE1-204ENST00000600440 INTS13Q9NVM9 706 aa18.46■□□□□ 0.54
SYDE1-204ENST00000600440 RTEL1Q9NZ71 1219 aa18.46■□□□□ 0.54
SYDE1-204ENST00000600440 MED23Q9ULK4 1368 aa18.46■□□□□ 0.54
SYDE1-204ENST00000600440 MROH7-TTC4A0A0A0MT08 1334 aa18.45■□□□□ 0.54
SYDE1-204ENST00000600440 CT47A1Q5JQC4 288 aaPredicted RBP18.45■□□□□ 0.54
SYDE1-204ENST00000600440 C14orf37Q86TY3 774 aa18.45■□□□□ 0.54
SYDE1-204ENST00000600440 CLIC6Q96NY7 704 aa18.45■□□□□ 0.54
SYDE1-204ENST00000600440 BPIFA3Q9BQP9 254 aa18.45■□□□□ 0.54
SYDE1-204ENST00000600440 ALKQ9UM73 1620 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms