RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 KIAA0825Q8IV33 1275 aa18.85■□□□□ 0.61
LIG1-219ENST00000600055 CNTROBQ8N137 903 aa18.85■□□□□ 0.61
LIG1-219ENST00000600055 MYO3BQ8WXR4 1341 aa18.84■□□□□ 0.61
LIG1-219ENST00000600055 ITGBL1O95965 494 aaPredicted RBP18.84■□□□□ 0.61
LIG1-219ENST00000600055 CHAF1AQ13111 956 aaPredicted RBP18.84■□□□□ 0.61
LIG1-219ENST00000600055 FAM205AQ6ZU69 1335 aa18.83■□□□□ 0.61
LIG1-219ENST00000600055 OS9Q13438 667 aaPredicted RBP18.83■□□□□ 0.6
LIG1-219ENST00000600055 SIRT2Q8IXJ6 389 aa18.83■□□□□ 0.6
LIG1-219ENST00000600055 CHMP4BQ9H444 224 aaKnown RBP18.83■□□□□ 0.6
LIG1-219ENST00000600055 MYOZ2Q9NPC6 264 aa18.83■□□□□ 0.6
LIG1-219ENST00000600055 NOP58Q9Y2X3 529 aaKnown RBP18.83■□□□□ 0.6
LIG1-219ENST00000600055 ASTN2O75129 1339 aaPredicted RBP18.82■□□□□ 0.6
LIG1-219ENST00000600055 A0A1B0GUL7 405 aa18.82■□□□□ 0.6
LIG1-219ENST00000600055 F8W031 263 aaPredicted RBP18.82■□□□□ 0.6
LIG1-219ENST00000600055 FRAT2O75474 233 aaPredicted RBP18.82■□□□□ 0.6
LIG1-219ENST00000600055 PHKA1P46020 1223 aa18.82■□□□□ 0.6
LIG1-219ENST00000600055 HTRA3P83110 453 aa18.82■□□□□ 0.6
LIG1-219ENST00000600055 FMR1Q06787 632 aaKnown RBP eCLIP18.82■□□□□ 0.6
LIG1-219ENST00000600055 PGAP2Q9UHJ9 254 aa18.82■□□□□ 0.6
LIG1-219ENST00000600055 AKAP2Q9Y2D5 859 aa18.82■□□□□ 0.6
LIG1-219ENST00000600055 PASKQ96RG2 1323 aa18.81■□□□□ 0.6
LIG1-219ENST00000600055 FKBP1AP62942 108 aaKnown RBP18.81■□□□□ 0.6
LIG1-219ENST00000600055 MFSD14BQ5SR56 506 aa18.81■□□□□ 0.6
LIG1-219ENST00000600055 RPAP2Q8IXW5 612 aaPredicted RBP18.81■□□□□ 0.6
LIG1-219ENST00000600055 XAGE2Q96GT9 111 aa18.81■□□□□ 0.6
LIG1-219ENST00000600055 NEUROD6Q96NK8 337 aa18.81■□□□□ 0.6
LIG1-219ENST00000600055 EXOC6BQ9Y2D4 811 aa18.81■□□□□ 0.6
LIG1-219ENST00000600055 TRAF5O00463 557 aa18.8■□□□□ 0.6
LIG1-219ENST00000600055 APLP1P51693 650 aa18.8■□□□□ 0.6
LIG1-219ENST00000600055 SCARF1Q14162 830 aa18.8■□□□□ 0.6
LIG1-219ENST00000600055 GRIK5Q16478 980 aa18.8■□□□□ 0.6
LIG1-219ENST00000600055 OGFOD1Q8N543 542 aa18.8■□□□□ 0.6
LIG1-219ENST00000600055 ZC3H15Q8WU90 426 aaKnown RBP18.8■□□□□ 0.6
LIG1-219ENST00000600055 GLIS2Q9BZE0 524 aaPredicted RBP18.8■□□□□ 0.6
LIG1-219ENST00000600055 NBPF9Q3BBW0 867 aa18.79■□□□□ 0.6
LIG1-219ENST00000600055 CCDC102BQ68D86 513 aa18.79■□□□□ 0.6
LIG1-219ENST00000600055 DLK2Q6UY11 383 aa18.79■□□□□ 0.6
LIG1-219ENST00000600055 CRBNQ96SW2 442 aa18.79■□□□□ 0.6
LIG1-219ENST00000600055 HDAC9Q9UKV0 1011 aa18.79■□□□□ 0.6
LIG1-219ENST00000600055 PCDHAC2Q9Y5I4 1007 aa18.79■□□□□ 0.6
LIG1-219ENST00000600055 COL1A1P02452 1464 aaPredicted RBP18.78■□□□□ 0.6
LIG1-219ENST00000600055 GGA3Q9NZ52 723 aa18.78■□□□□ 0.6
LIG1-219ENST00000600055 WNT10BO00744 389 aa18.77■□□□□ 0.6
LIG1-219ENST00000600055 TNNI3KQ59H18 835 aa18.77■□□□□ 0.6
LIG1-219ENST00000600055 ANGEL2Q5VTE6 544 aaKnown RBP18.77■□□□□ 0.6
LIG1-219ENST00000600055 USP48Q86UV5 1035 aa18.77■□□□□ 0.6
LIG1-219ENST00000600055 GNL3LQ9NVN8 582 aaKnown RBP18.77■□□□□ 0.6
LIG1-219ENST00000600055 SCAF8Q9UPN6 1271 aaKnown RBP18.77■□□□□ 0.6
LIG1-219ENST00000600055 FPGT-TNNI3KV9GXZ4 949 aa18.77■□□□□ 0.6
LIG1-219ENST00000600055 HMMRO75330 724 aa18.76■□□□□ 0.59
LIG1-219ENST00000600055 CDC37L1Q7L3B6 337 aa18.76■□□□□ 0.59
LIG1-219ENST00000600055 DCPSQ96C86 337 aaKnown RBP18.76■□□□□ 0.59
LIG1-219ENST00000600055 ZBED3Q96IU2 234 aaPredicted RBP18.76■□□□□ 0.59
LIG1-219ENST00000600055 GPR108Q9NPR9 543 aa18.76■□□□□ 0.59
LIG1-219ENST00000600055 TTF2Q9UNY4 1162 aaKnown RBP18.76■□□□□ 0.59
LIG1-219ENST00000600055 ARAP2Q8WZ64 1704 aa18.75■□□□□ 0.59
LIG1-219ENST00000600055 ADM5C9JUS6 153 aa18.75■□□□□ 0.59
LIG1-219ENST00000600055 APBB1O00213 710 aa18.75■□□□□ 0.59
LIG1-219ENST00000600055 MMP14P50281 582 aa18.75■□□□□ 0.59
LIG1-219ENST00000600055 CFAP100Q494V2 611 aa18.75■□□□□ 0.59
LIG1-219ENST00000600055 GORABQ5T7V8 394 aa18.75■□□□□ 0.59
LIG1-219ENST00000600055 KRT26Q7Z3Y9 468 aa18.75■□□□□ 0.59
LIG1-219ENST00000600055 TBC1D22AQ8WUA7 517 aa18.75■□□□□ 0.59
LIG1-219ENST00000600055 DBNDD2Q9BQY9 259 aa18.75■□□□□ 0.59
LIG1-219ENST00000600055 DENND2AQ9ULE3 1009 aa18.75■□□□□ 0.59
LIG1-219ENST00000600055 SUPT16HQ9Y5B9 1047 aaKnown RBP18.75■□□□□ 0.59
LIG1-219ENST00000600055 AOX1Q06278 1338 aa18.74■□□□□ 0.59
LIG1-219ENST00000600055 RASGRF1Q13972 1273 aa18.74■□□□□ 0.59
LIG1-219ENST00000600055 DLGAP5Q15398 846 aa18.74■□□□□ 0.59
LIG1-219ENST00000600055 WDR66Q8TBY9 1149 aa18.74■□□□□ 0.59
LIG1-219ENST00000600055 EAF2Q96CJ1 260 aaPredicted RBP18.74■□□□□ 0.59
LIG1-219ENST00000600055 CCDC8Q9H0W5 538 aaPredicted RBP18.74■□□□□ 0.59
LIG1-219ENST00000600055 TLR7Q9NYK1 1049 aaKnown RBP18.74■□□□□ 0.59
LIG1-219ENST00000600055 SEMA3EO15041 775 aa18.73■□□□□ 0.59
LIG1-219ENST00000600055 RBM5P52756 815 aaKnown RBP eCLIP18.73■□□□□ 0.59
LIG1-219ENST00000600055 HSP90AB4PQ58FF6 505 aa18.73■□□□□ 0.59
LIG1-219ENST00000600055 CST9Q5W186 159 aa18.73■□□□□ 0.59
LIG1-219ENST00000600055 ERC1Q8IUD2 1116 aa18.73■□□□□ 0.59
LIG1-219ENST00000600055 MTMR14Q8NCE2 650 aa18.73■□□□□ 0.59
LIG1-219ENST00000600055 RHPN1Q8TCX5 695 aa18.73■□□□□ 0.59
LIG1-219ENST00000600055 PRMT6Q96LA8 375 aaPredicted RBP18.73■□□□□ 0.59
LIG1-219ENST00000600055 IL1RAPL2Q9NP60 686 aa18.73■□□□□ 0.59
LIG1-219ENST00000600055 PCDHB15Q9Y5E8 787 aa18.73■□□□□ 0.59
LIG1-219ENST00000600055 TMEM88BA6NKF7 163 aa18.72■□□□□ 0.59
LIG1-219ENST00000600055 PI16Q6UXB8 463 aa18.72■□□□□ 0.59
LIG1-219ENST00000600055 SULF1Q8IWU6 871 aa18.72■□□□□ 0.59
LIG1-219ENST00000600055 ZNF408Q9H9D4 720 aa18.72■□□□□ 0.59
LIG1-219ENST00000600055 CREBZFQ9NS37 354 aa18.72■□□□□ 0.59
LIG1-219ENST00000600055 SPDYE2BA6NHP3 402 aa18.71■□□□□ 0.59
LIG1-219ENST00000600055 CELF2O95319 508 aaKnown RBP18.71■□□□□ 0.59
LIG1-219ENST00000600055 SPDYE6P0CI01 402 aa18.71■□□□□ 0.59
LIG1-219ENST00000600055 ARID4AP29374 1257 aaPredicted RBP18.71■□□□□ 0.59
LIG1-219ENST00000600055 PRDX5P30044 214 aa18.71■□□□□ 0.59
LIG1-219ENST00000600055 CRKP46108 304 aa18.71■□□□□ 0.59
LIG1-219ENST00000600055 BCL11AQ9H165 835 aa18.71■□□□□ 0.59
LIG1-219ENST00000600055 HMG20BQ9P0W2 317 aa18.71■□□□□ 0.59
LIG1-219ENST00000600055 DBNLQ9UJU6 430 aaKnown RBP18.71■□□□□ 0.59
LIG1-219ENST00000600055 SERPINA10Q9UK55 444 aa18.71■□□□□ 0.59
LIG1-219ENST00000600055 PITPNM2Q9BZ72 1349 aa18.71■□□□□ 0.59
LIG1-219ENST00000600055 CLRN2A0PK11 232 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms