RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 CERS5Q8N5B7 392 aa34.95■■■■□ 3.19
SSBP4-206ENST00000599699 DCPSQ96C86 337 aaKnown RBP34.95■■■■□ 3.19
SSBP4-206ENST00000599699 CREBZFQ9NS37 354 aa34.95■■■■□ 3.19
SSBP4-206ENST00000599699 G3BP1Q13283 466 aaKnown RBP eCLIP34.94■■■■□ 3.18
SSBP4-206ENST00000599699 SCARF1Q14162 830 aa34.94■■■■□ 3.18
SSBP4-206ENST00000599699 CDC37L1Q7L3B6 337 aa34.94■■■■□ 3.18
SSBP4-206ENST00000599699 DDX19BQ9UMR2 479 aa34.94■■■■□ 3.18
SSBP4-206ENST00000599699 FAM205AQ6ZU69 1335 aa34.93■■■■□ 3.18
SSBP4-206ENST00000599699 TMEM88BA6NKF7 163 aa34.93■■■■□ 3.18
SSBP4-206ENST00000599699 F8W031 263 aaPredicted RBP34.93■■■■□ 3.18
SSBP4-206ENST00000599699 MMP14P50281 582 aa34.93■■■■□ 3.18
SSBP4-206ENST00000599699 FMR1Q06787 632 aaKnown RBP eCLIP34.93■■■■□ 3.18
SSBP4-206ENST00000599699 CHAF1AQ13111 956 aaPredicted RBP34.93■■■■□ 3.18
SSBP4-206ENST00000599699 FKBP1AP62942 108 aaKnown RBP34.92■■■■□ 3.18
SSBP4-206ENST00000599699 TFCP2Q12800 502 aa34.92■■■■□ 3.18
SSBP4-206ENST00000599699 USP48Q86UV5 1035 aa34.92■■■■□ 3.18
SSBP4-206ENST00000599699 GGA3Q9NZ52 723 aa34.92■■■■□ 3.18
SSBP4-206ENST00000599699 ZNF646O15015 1829 aaPredicted RBP34.92■■■■□ 3.18
SSBP4-206ENST00000599699 POLA2Q14181 598 aa34.91■■■■□ 3.18
SSBP4-206ENST00000599699 MFSD14BQ5SR56 506 aa34.91■■■■□ 3.18
SSBP4-206ENST00000599699 KRT26Q7Z3Y9 468 aa34.91■■■■□ 3.18
SSBP4-206ENST00000599699 SSH3Q8TE77 659 aa34.91■■■■□ 3.18
SSBP4-206ENST00000599699 ASTN2O75129 1339 aaPredicted RBP34.9■■■■□ 3.18
SSBP4-206ENST00000599699 AKAP2Q9Y2D5 859 aa34.9■■■■□ 3.18
SSBP4-206ENST00000599699 OS9Q13438 667 aaPredicted RBP34.89■■■■□ 3.18
SSBP4-206ENST00000599699 PDE3AQ14432 1141 aa34.89■■■■□ 3.18
SSBP4-206ENST00000599699 C20orf194Q5TEA3 1177 aa34.89■■■■□ 3.18
SSBP4-206ENST00000599699 ANGEL2Q5VTE6 544 aaKnown RBP34.89■■■■□ 3.18
SSBP4-206ENST00000599699 DNAJC5GQ8N7S2 189 aa34.89■■■■□ 3.18
SSBP4-206ENST00000599699 CHMP4BQ9H444 224 aaKnown RBP34.89■■■■□ 3.18
SSBP4-206ENST00000599699 SULF1Q8IWU6 871 aa34.88■■■■□ 3.17
SSBP4-206ENST00000599699 NBPF9Q3BBW0 867 aa34.87■■■■□ 3.17
SSBP4-206ENST00000599699 CEP85Q6P2H3 762 aa34.87■■■■□ 3.17
SSBP4-206ENST00000599699 ZNF408Q9H9D4 720 aa34.87■■■■□ 3.17
SSBP4-206ENST00000599699 GNL3LQ9NVN8 582 aaKnown RBP34.87■■■■□ 3.17
SSBP4-206ENST00000599699 SURF6O75683 361 aaKnown RBP34.86■■■■□ 3.17
SSBP4-206ENST00000599699 TIMM10P62072 90 aa34.86■■■■□ 3.17
SSBP4-206ENST00000599699 ADM5C9JUS6 153 aa34.85■■■■□ 3.17
SSBP4-206ENST00000599699 WNT10BO00744 389 aa34.85■■■■□ 3.17
SSBP4-206ENST00000599699 CELF2O95319 508 aaKnown RBP34.85■■■■□ 3.17
SSBP4-206ENST00000599699 DLGAP5Q15398 846 aa34.85■■■■□ 3.17
SSBP4-206ENST00000599699 TBC1D22AQ8WUA7 517 aa34.85■■■■□ 3.17
SSBP4-206ENST00000599699 KLRG1Q96E93 195 aa34.85■■■■□ 3.17
SSBP4-206ENST00000599699 ABT1Q9ULW3 272 aaKnown RBP34.85■■■■□ 3.17
SSBP4-206ENST00000599699 A0A1B0GUL7 405 aa34.84■■■■□ 3.17
SSBP4-206ENST00000599699 ADORA1P30542 326 aa34.84■■■■□ 3.17
SSBP4-206ENST00000599699 NEUROD6Q96NK8 337 aa34.84■■■■□ 3.17
SSBP4-206ENST00000599699 RBM5P52756 815 aaKnown RBP eCLIP34.83■■■■□ 3.171e-11■■■□□ 16.2
SSBP4-206ENST00000599699 DLK2Q6UY11 383 aa34.83■■■■□ 3.17
SSBP4-206ENST00000599699 ZBTB40Q9NUA8 1239 aa34.83■■■■□ 3.17
SSBP4-206ENST00000599699 TTF2Q9UNY4 1162 aaKnown RBP34.83■■■■□ 3.17
SSBP4-206ENST00000599699 CST9Q5W186 159 aa34.82■■■■□ 3.16
SSBP4-206ENST00000599699 MKRN1Q9UHC7 482 aaKnown RBP34.82■■■■□ 3.16
SSBP4-206ENST00000599699 PHKA1P46020 1223 aa34.81■■■■□ 3.16
SSBP4-206ENST00000599699 CFAP100Q494V2 611 aa34.81■■■■□ 3.16
SSBP4-206ENST00000599699 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP34.81■■■■□ 3.16
SSBP4-206ENST00000599699 PITPNM2Q9BZ72 1349 aa34.81■■■■□ 3.16
SSBP4-206ENST00000599699 XAGE2Q96GT9 111 aa34.8■■■■□ 3.16
SSBP4-206ENST00000599699 GORABQ5T7V8 394 aa34.79■■■■□ 3.16
SSBP4-206ENST00000599699 CCDC102BQ68D86 513 aa34.79■■■■□ 3.16
SSBP4-206ENST00000599699 WDR66Q8TBY9 1149 aa34.79■■■■□ 3.16
SSBP4-206ENST00000599699 SCAF8Q9UPN6 1271 aaKnown RBP34.79■■■■□ 3.16
SSBP4-206ENST00000599699 MTMR14Q8NCE2 650 aa34.78■■■■□ 3.16
SSBP4-206ENST00000599699 NOP58Q9Y2X3 529 aaKnown RBP34.78■■■■□ 3.16
SSBP4-206ENST00000599699 RPAP2Q8IXW5 612 aaPredicted RBP34.77■■■■□ 3.16
SSBP4-206ENST00000599699 ZBED3Q96IU2 234 aaPredicted RBP34.77■■■■□ 3.16
SSBP4-206ENST00000599699 PCDHAC2Q9Y5I4 1007 aa34.77■■■■□ 3.16
SSBP4-206ENST00000599699 MYO1BO43795 1136 aa34.76■■■■□ 3.16
SSBP4-206ENST00000599699 GRIK5Q16478 980 aa34.76■■■■□ 3.16
SSBP4-206ENST00000599699 SERPINA10Q9UK55 444 aa34.76■■■■□ 3.16
SSBP4-206ENST00000599699 DENND2AQ9ULE3 1009 aa34.76■■■■□ 3.16
SSBP4-206ENST00000599699 POLR2AP24928 1970 aaKnown RBP34.76■■■■□ 3.15
SSBP4-206ENST00000599699 SEMA3EO15041 775 aa34.75■■■■□ 3.15
SSBP4-206ENST00000599699 TRPM7Q96QT4 1865 aa34.75■■■■□ 3.15
SSBP4-206ENST00000599699 CNTNAP1P78357 1384 aa34.74■■■■□ 3.15
SSBP4-206ENST00000599699 SPDYE2BA6NHP3 402 aa34.74■■■■□ 3.15
SSBP4-206ENST00000599699 HMMRO75330 724 aa34.74■■■■□ 3.15
SSBP4-206ENST00000599699 SPDYE6P0CI01 402 aa34.74■■■■□ 3.15
SSBP4-206ENST00000599699 RRP1P56182 461 aaKnown RBP34.74■■■■□ 3.15
SSBP4-206ENST00000599699 DEFB115Q30KQ5 88 aa34.74■■■■□ 3.15
SSBP4-206ENST00000599699 CDCA5Q96FF9 252 aa34.74■■■■□ 3.15
SSBP4-206ENST00000599699 PAXIP1Q6ZW49 1069 aaPredicted RBP34.73■■■■□ 3.15
SSBP4-206ENST00000599699 APOBEC3FQ8IUX4 373 aaKnown RBP34.73■■■■□ 3.15
SSBP4-206ENST00000599699 PRMT6Q96LA8 375 aaPredicted RBP34.73■■■■□ 3.15
SSBP4-206ENST00000599699 EXOC6BQ9Y2D4 811 aa34.73■■■■□ 3.15
SSBP4-206ENST00000599699 SUGT1Q9Y2Z0 365 aa34.73■■■■□ 3.15
SSBP4-206ENST00000599699 COL1A1P02452 1464 aaPredicted RBP34.72■■■■□ 3.15
SSBP4-206ENST00000599699 CRKP46108 304 aa34.72■■■■□ 3.15
SSBP4-206ENST00000599699 TNNI3KQ59H18 835 aa34.72■■■■□ 3.15
SSBP4-206ENST00000599699 GPR108Q9NPR9 543 aa34.72■■■■□ 3.15
SSBP4-206ENST00000599699 TLL2Q9Y6L7 1015 aa34.72■■■■□ 3.15
SSBP4-206ENST00000599699 FPGT-TNNI3KV9GXZ4 949 aa34.72■■■■□ 3.15
SSBP4-206ENST00000599699 CLRN2A0PK11 232 aa34.71■■■■□ 3.15
SSBP4-206ENST00000599699 RASSF10A6NK89 507 aa34.71■■■■□ 3.15
SSBP4-206ENST00000599699 ARAP2Q8WZ64 1704 aa34.71■■■■□ 3.15
SSBP4-206ENST00000599699 MAST3O60307 1309 aa34.71■■■■□ 3.15
SSBP4-206ENST00000599699 RASGRF1Q13972 1273 aa34.7■■■■□ 3.15
SSBP4-206ENST00000599699 ERC1Q8IUD2 1116 aa34.7■■■■□ 3.15
SSBP4-206ENST00000599699 TEKT1Q969V4 418 aa34.7■■■■□ 3.15
SSBP4-206ENST00000599699 VEZTQ9HBM0 779 aa34.7■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms