RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 FAM205AQ6ZU69 1335 aa28.34■■■□□ 2.13
IRF3-220ENST00000598108 SLC5A1P13866 664 aa28.33■■■□□ 2.13
IRF3-220ENST00000598108 POLA2Q14181 598 aa28.33■■■□□ 2.13
IRF3-220ENST00000598108 C20orf194Q5TEA3 1177 aa28.33■■■□□ 2.13
IRF3-220ENST00000598108 USP48Q86UV5 1035 aa28.33■■■□□ 2.13
IRF3-220ENST00000598108 OGFOD1Q8N543 542 aa28.33■■■□□ 2.13
IRF3-220ENST00000598108 PSME4Q14997 1843 aa28.32■■■□□ 2.12
IRF3-220ENST00000598108 MVPQ14764 893 aaKnown RBP28.32■■■□□ 2.12
IRF3-220ENST00000598108 ATP2B3Q16720 1220 aa28.32■■■□□ 2.12
IRF3-220ENST00000598108 CST9Q5W186 159 aa28.32■■■□□ 2.12
IRF3-220ENST00000598108 CDC37L1Q7L3B6 337 aa28.32■■■□□ 2.12
IRF3-220ENST00000598108 TMEM88BA6NKF7 163 aa28.31■■■□□ 2.12
IRF3-220ENST00000598108 FKBP1AP62942 108 aaKnown RBP28.31■■■□□ 2.12
IRF3-220ENST00000598108 TFCP2Q12800 502 aa28.31■■■□□ 2.12
IRF3-220ENST00000598108 SSH3Q8TE77 659 aa28.31■■■□□ 2.12
IRF3-220ENST00000598108 ZNF646O15015 1829 aaPredicted RBP28.3■■■□□ 2.12
IRF3-220ENST00000598108 F8W031 263 aaPredicted RBP28.3■■■□□ 2.12
IRF3-220ENST00000598108 NBPF9Q3BBW0 867 aa28.3■■■□□ 2.12
IRF3-220ENST00000598108 GGA3Q9NZ52 723 aa28.3■■■□□ 2.12
IRF3-220ENST00000598108 TIMM10P62072 90 aa28.29■■■□□ 2.12
IRF3-220ENST00000598108 KRT26Q7Z3Y9 468 aa28.29■■■□□ 2.12
IRF3-220ENST00000598108 DCPSQ96C86 337 aaKnown RBP28.29■■■□□ 2.12
IRF3-220ENST00000598108 ADORA1P30542 326 aa28.28■■■□□ 2.12
IRF3-220ENST00000598108 CHAF1AQ13111 956 aaPredicted RBP28.28■■■□□ 2.12
IRF3-220ENST00000598108 MFSD14BQ5SR56 506 aa28.28■■■□□ 2.12
IRF3-220ENST00000598108 ANGEL2Q5VTE6 544 aaKnown RBP28.28■■■□□ 2.12
IRF3-220ENST00000598108 KLRG1Q96E93 195 aa28.28■■■□□ 2.12
IRF3-220ENST00000598108 HDAC9Q9UKV0 1011 aa28.28■■■□□ 2.12
IRF3-220ENST00000598108 ADM5C9JUS6 153 aa28.27■■■□□ 2.12
IRF3-220ENST00000598108 WNT10BO00744 389 aa28.27■■■□□ 2.12
IRF3-220ENST00000598108 FRAT2O75474 233 aaPredicted RBP28.27■■■□□ 2.12
IRF3-220ENST00000598108 MMP14P50281 582 aa28.27■■■□□ 2.12
IRF3-220ENST00000598108 G3BP1Q13283 466 aaKnown RBP eCLIP28.27■■■□□ 2.12
IRF3-220ENST00000598108 GRIK5Q16478 980 aa28.27■■■□□ 2.12
IRF3-220ENST00000598108 CEP85Q6P2H3 762 aa28.27■■■□□ 2.12
IRF3-220ENST00000598108 ZBED3Q96IU2 234 aaPredicted RBP28.27■■■□□ 2.12
IRF3-220ENST00000598108 PCDHAC2Q9Y5I4 1007 aa28.27■■■□□ 2.12
IRF3-220ENST00000598108 PDE3AQ14432 1141 aa28.26■■■□□ 2.11
IRF3-220ENST00000598108 ZBTB40Q9NUA8 1239 aa28.26■■■□□ 2.11
IRF3-220ENST00000598108 SCAF8Q9UPN6 1271 aaKnown RBP28.26■■■□□ 2.11
IRF3-220ENST00000598108 DDX19BQ9UMR2 479 aa28.25■■■□□ 2.11
IRF3-220ENST00000598108 CELF2O95319 508 aaKnown RBP28.24■■■□□ 2.11
IRF3-220ENST00000598108 PHKA1P46020 1223 aa28.24■■■□□ 2.11
IRF3-220ENST00000598108 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.24■■■□□ 2.11
IRF3-220ENST00000598108 MKRN1Q9UHC7 482 aaKnown RBP28.24■■■□□ 2.11
IRF3-220ENST00000598108 A0A1B0GUL7 405 aa28.23■■■□□ 2.11
IRF3-220ENST00000598108 SURF6O75683 361 aaKnown RBP28.23■■■□□ 2.11
IRF3-220ENST00000598108 SULF1Q8IWU6 871 aa28.23■■■□□ 2.11
IRF3-220ENST00000598108 ZNF408Q9H9D4 720 aa28.23■■■□□ 2.11
IRF3-220ENST00000598108 AKAP2Q9Y2D5 859 aa28.23■■■□□ 2.11
IRF3-220ENST00000598108 DLGAP5Q15398 846 aa28.22■■■□□ 2.11
IRF3-220ENST00000598108 CFAP100Q494V2 611 aa28.22■■■□□ 2.11
IRF3-220ENST00000598108 NOP58Q9Y2X3 529 aaKnown RBP28.22■■■□□ 2.11
IRF3-220ENST00000598108 CCDC102BQ68D86 513 aa28.21■■■□□ 2.11
IRF3-220ENST00000598108 MTMR14Q8NCE2 650 aa28.21■■■□□ 2.11
IRF3-220ENST00000598108 XAGE2Q96GT9 111 aa28.21■■■□□ 2.11
IRF3-220ENST00000598108 ABT1Q9ULW3 272 aaKnown RBP28.21■■■□□ 2.11
IRF3-220ENST00000598108 TTF2Q9UNY4 1162 aaKnown RBP28.21■■■□□ 2.11
IRF3-220ENST00000598108 AOX1Q06278 1338 aa28.2■■■□□ 2.11
IRF3-220ENST00000598108 PITPNM2Q9BZ72 1349 aa28.2■■■□□ 2.11
IRF3-220ENST00000598108 TBC1D22AQ8WUA7 517 aa28.2■■■□□ 2.1
IRF3-220ENST00000598108 PRMT6Q96LA8 375 aaPredicted RBP28.2■■■□□ 2.1
IRF3-220ENST00000598108 SIRT2Q8IXJ6 389 aa28.19■■■□□ 2.1
IRF3-220ENST00000598108 NEUROD6Q96NK8 337 aa28.19■■■□□ 2.1
IRF3-220ENST00000598108 GNL3LQ9NVN8 582 aaKnown RBP28.19■■■□□ 2.1
IRF3-220ENST00000598108 CNTNAP1P78357 1384 aa28.19■■■□□ 2.1
IRF3-220ENST00000598108 COL1A1P02452 1464 aaPredicted RBP28.19■■■□□ 2.1
IRF3-220ENST00000598108 SPDYE2BA6NHP3 402 aa28.18■■■□□ 2.1
IRF3-220ENST00000598108 SPDYE6P0CI01 402 aa28.18■■■□□ 2.1
IRF3-220ENST00000598108 OS9Q13438 667 aaPredicted RBP28.18■■■□□ 2.1
IRF3-220ENST00000598108 RASSF10A6NK89 507 aa28.17■■■□□ 2.1
IRF3-220ENST00000598108 PRAMEF18Q5VWM3 479 aa28.17■■■□□ 2.1
IRF3-220ENST00000598108 JMYQ8N9B5 988 aa28.17■■■□□ 2.1
IRF3-220ENST00000598108 CDCA5Q96FF9 252 aa28.17■■■□□ 2.1
IRF3-220ENST00000598108 TLL2Q9Y6L7 1015 aa28.17■■■□□ 2.1
IRF3-220ENST00000598108 RBM5P52756 815 aaKnown RBP eCLIP28.16■■■□□ 2.1
IRF3-220ENST00000598108 DEFB115Q30KQ5 88 aa28.16■■■□□ 2.1
IRF3-220ENST00000598108 WDR66Q8TBY9 1149 aa28.16■■■□□ 2.1
IRF3-220ENST00000598108 SERPINA10Q9UK55 444 aa28.16■■■□□ 2.1
IRF3-220ENST00000598108 VEGFBP49765 207 aa28.15■■■□□ 2.1
IRF3-220ENST00000598108 SAPCD2Q86UD0 394 aa28.15■■■□□ 2.1
IRF3-220ENST00000598108 RPAP2Q8IXW5 612 aaPredicted RBP28.15■■■□□ 2.1
IRF3-220ENST00000598108 CLRN2A0PK11 232 aa28.14■■■□□ 2.1
IRF3-220ENST00000598108 ZBTB22O15209 634 aa28.14■■■□□ 2.1
IRF3-220ENST00000598108 CRKP46108 304 aa28.14■■■□□ 2.1
IRF3-220ENST00000598108 RASGRF1Q13972 1273 aa28.14■■■□□ 2.1
IRF3-220ENST00000598108 CHMP4BQ9H444 224 aaKnown RBP28.14■■■□□ 2.1
IRF3-220ENST00000598108 DENND2AQ9ULE3 1009 aa28.14■■■□□ 2.1
IRF3-220ENST00000598108 EXOC6BQ9Y2D4 811 aa28.14■■■□□ 2.1
IRF3-220ENST00000598108 POLR2AP24928 1970 aaKnown RBP28.13■■■□□ 2.09
IRF3-220ENST00000598108 SEMA3EO15041 775 aa28.13■■■□□ 2.09
IRF3-220ENST00000598108 RRP1P56182 461 aaKnown RBP28.13■■■□□ 2.09
IRF3-220ENST00000598108 TNNI3KQ59H18 835 aa28.13■■■□□ 2.09
IRF3-220ENST00000598108 GPR108Q9NPR9 543 aa28.13■■■□□ 2.09
IRF3-220ENST00000598108 SUGT1Q9Y2Z0 365 aa28.13■■■□□ 2.09
IRF3-220ENST00000598108 FPGT-TNNI3KV9GXZ4 949 aa28.13■■■□□ 2.09
IRF3-220ENST00000598108 HDLBPQ00341 1268 aaKnown RBP28.11■■■□□ 2.09
IRF3-220ENST00000598108 APOBEC3FQ8IUX4 373 aaKnown RBP28.11■■■□□ 2.09
IRF3-220ENST00000598108 GBA2Q9HCG7 927 aaPredicted RBP28.11■■■□□ 2.09
IRF3-220ENST00000598108 PRDX5P30044 214 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms