RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 GREM2Q9H772 168 aa20.05■□□□□ 0.8
LIG1-214ENST00000597146 ELP3Q9H9T3 547 aa20.05■□□□□ 0.8
LIG1-214ENST00000597146 BSDC1Q9NW68 430 aaPredicted RBP20.05■□□□□ 0.8
LIG1-214ENST00000597146 PPP2R3BQ9Y5P8 575 aa20.05■□□□□ 0.8
LIG1-214ENST00000597146 ZNF804BA4D1E1 1349 aa20.04■□□□□ 0.8
LIG1-214ENST00000597146 USP2O75604 605 aaPredicted RBP20.04■□□□□ 0.8
LIG1-214ENST00000597146 IREB2P48200 963 aaKnown RBP20.04■□□□□ 0.8
LIG1-214ENST00000597146 CERS5Q8N5B7 392 aa20.04■□□□□ 0.8
LIG1-214ENST00000597146 ARHGAP39Q9C0H5 1083 aa20.04■□□□□ 0.8
LIG1-214ENST00000597146 ARAP2Q8WZ64 1704 aa20.03■□□□□ 0.8
LIG1-214ENST00000597146 TAF1CQ15572 869 aaPredicted RBP20.03■□□□□ 0.8
LIG1-214ENST00000597146 CCDC146Q8IYE0 955 aa20.03■□□□□ 0.8
LIG1-214ENST00000597146 ANKRD13AQ8IZ07 590 aa20.03■□□□□ 0.8
LIG1-214ENST00000597146 CNKSR2Q8WXI2 1034 aa20.03■□□□□ 0.8
LIG1-214ENST00000597146 BRI3BPQ8WY22 251 aa20.03■□□□□ 0.8
LIG1-214ENST00000597146 DPF3Q92784 378 aa20.03■□□□□ 0.8
LIG1-214ENST00000597146 OPTNQ96CV9 577 aa20.03■□□□□ 0.8
LIG1-214ENST00000597146 MS4A4AQ96JQ5 239 aa20.03■□□□□ 0.8
LIG1-214ENST00000597146 VEZTQ9HBM0 779 aa20.03■□□□□ 0.8
LIG1-214ENST00000597146 UNCXA6NJT0 531 aa20.02■□□□□ 0.8
LIG1-214ENST00000597146 SUPT20HL1Q3ZLR7 823 aa20.02■□□□□ 0.8
LIG1-214ENST00000597146 TTLL11Q8NHH1 800 aa20.02■□□□□ 0.8
LIG1-214ENST00000597146 TRIM35Q9UPQ4 493 aa20.02■□□□□ 0.8
LIG1-214ENST00000597146 F8W031 263 aaPredicted RBP20.01■□□□□ 0.79
LIG1-214ENST00000597146 PRO3102Q9H379 93 aa20.01■□□□□ 0.79
LIG1-214ENST00000597146 LEMD3Q9Y2U8 911 aa20.01■□□□□ 0.79
LIG1-214ENST00000597146 ARHGEF6Q15052 776 aa20■□□□□ 0.79
LIG1-214ENST00000597146 CFAP100Q494V2 611 aa20■□□□□ 0.79
LIG1-214ENST00000597146 FAM43AQ8N2R8 423 aa20■□□□□ 0.79
LIG1-214ENST00000597146 MTMR14Q8NCE2 650 aa20■□□□□ 0.79
LIG1-214ENST00000597146 ZFYVE28Q9HCC9 887 aa20■□□□□ 0.79
LIG1-214ENST00000597146 CCL15-CCL14A0A0B4J2E2 113 aa19.99■□□□□ 0.79
LIG1-214ENST00000597146 SPDYE2BA6NHP3 402 aa19.99■□□□□ 0.79
LIG1-214ENST00000597146 SPDYE6P0CI01 402 aa19.99■□□□□ 0.79
LIG1-214ENST00000597146 MTFR1Q15390 333 aa19.99■□□□□ 0.79
LIG1-214ENST00000597146 CCL15Q16663 113 aa19.99■□□□□ 0.79
LIG1-214ENST00000597146 PRMT6Q96LA8 375 aaPredicted RBP19.99■□□□□ 0.79
LIG1-214ENST00000597146 METTL22Q9BUU2 404 aaPredicted RBP19.99■□□□□ 0.79
LIG1-214ENST00000597146 MYO1BO43795 1136 aa19.98■□□□□ 0.79
LIG1-214ENST00000597146 ECM2O94769 699 aaPredicted RBP19.98■□□□□ 0.79
LIG1-214ENST00000597146 RASA3Q14644 834 aa19.98■□□□□ 0.79
LIG1-214ENST00000597146 CDAN1Q8IWY9 1227 aa19.98■□□□□ 0.79
LIG1-214ENST00000597146 CD209Q9NNX6 404 aa19.98■□□□□ 0.79
LIG1-214ENST00000597146 SOX1O00570 391 aaPredicted RBP19.97■□□□□ 0.79
LIG1-214ENST00000597146 MBIPQ9NS73 344 aa19.97■□□□□ 0.79
LIG1-214ENST00000597146 SNAP23O00161 211 aa19.96■□□□□ 0.79
LIG1-214ENST00000597146 ZEB1P37275 1124 aaPredicted RBP19.96■□□□□ 0.79
LIG1-214ENST00000597146 IGHMBP2P38935 993 aaKnown RBP19.96■□□□□ 0.79
LIG1-214ENST00000597146 LACTBP83111 547 aaPredicted RBP19.96■□□□□ 0.79
LIG1-214ENST00000597146 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.96■□□□□ 0.79
LIG1-214ENST00000597146 JAG2Q9Y219 1238 aa19.96■□□□□ 0.79
LIG1-214ENST00000597146 IGKV5-2P06315 115 aa19.95■□□□□ 0.78
LIG1-214ENST00000597146 KCNJ4P48050 445 aa19.95■□□□□ 0.78
LIG1-214ENST00000597146 VGLL4Q14135 290 aa19.95■□□□□ 0.78
LIG1-214ENST00000597146 LRCH3Q96II8 777 aa19.95■□□□□ 0.78
LIG1-214ENST00000597146 MAP3K2Q9Y2U5 619 aa19.95■□□□□ 0.78
LIG1-214ENST00000597146 ALPK3Q96L96 1907 aa19.95■□□□□ 0.78
LIG1-214ENST00000597146 UNC80Q8N2C7 3258 aa19.95■□□□□ 0.78
LIG1-214ENST00000597146 IRS2Q9Y4H2 1338 aa19.95■□□□□ 0.78
LIG1-214ENST00000597146 ELL2O00472 640 aaPredicted RBP19.94■□□□□ 0.78
LIG1-214ENST00000597146 GTF2A2P52657 109 aa19.94■□□□□ 0.78
LIG1-214ENST00000597146 ANKRD2Q9GZV1 360 aa19.94■□□□□ 0.78
LIG1-214ENST00000597146 RBM5P52756 815 aaKnown RBP eCLIP19.93■□□□□ 0.78
LIG1-214ENST00000597146 DDX10Q13206 875 aaKnown RBP19.93■□□□□ 0.78
LIG1-214ENST00000597146 KIF22Q14807 665 aa19.93■□□□□ 0.78
LIG1-214ENST00000597146 UBE2Q1Q7Z7E8 422 aa19.93■□□□□ 0.78
LIG1-214ENST00000597146 MGAMO43451 1857 aa19.92■□□□□ 0.78
LIG1-214ENST00000597146 TLR2O60603 784 aa19.92■□□□□ 0.78
LIG1-214ENST00000597146 CTGFP29279 349 aa19.92■□□□□ 0.78
LIG1-214ENST00000597146 CHRNDQ07001 517 aa19.92■□□□□ 0.78
LIG1-214ENST00000597146 CWF19L2Q2TBE0 894 aaKnown RBP19.92■□□□□ 0.78
LIG1-214ENST00000597146 ZBTB7BO15156 539 aaPredicted RBP19.91■□□□□ 0.78
LIG1-214ENST00000597146 ITGA6P23229 1130 aa19.91■□□□□ 0.78
LIG1-214ENST00000597146 UBE3BQ7Z3V4 1068 aa19.91■□□□□ 0.78
LIG1-214ENST00000597146 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.91■□□□□ 0.78
LIG1-214ENST00000597146 TEPSINQ96N21 525 aa19.91■□□□□ 0.78
LIG1-214ENST00000597146 HTATIP2Q9BUP3 242 aa19.91■□□□□ 0.78
LIG1-214ENST00000597146 DDX58O95786 925 aaKnown RBP19.9■□□□□ 0.78
LIG1-214ENST00000597146 MNX1P50219 401 aaPredicted RBP19.9■□□□□ 0.78
LIG1-214ENST00000597146 SPDYE2Q495Y8 402 aa19.9■□□□□ 0.78
LIG1-214ENST00000597146 MPHOSPH8Q99549 860 aa19.9■□□□□ 0.78
LIG1-214ENST00000597146 ZNF70Q9UC06 446 aaPredicted RBP19.9■□□□□ 0.78
LIG1-214ENST00000597146 BTBD19C9JJ37 291 aa19.89■□□□□ 0.77
LIG1-214ENST00000597146 TAF5LO75529 589 aa19.89■□□□□ 0.77
LIG1-214ENST00000597146 GJA8P48165 433 aa19.89■□□□□ 0.77
LIG1-214ENST00000597146 MAP3K9P80192 1104 aa19.89■□□□□ 0.77
LIG1-214ENST00000597146 HELBQ8NG08 1087 aaPredicted RBP19.89■□□□□ 0.77
LIG1-214ENST00000597146 TMEM39BQ9GZU3 492 aa19.89■□□□□ 0.77
LIG1-214ENST00000597146 TDRD3Q9H7E2 651 aaKnown RBP19.89■□□□□ 0.77
LIG1-214ENST00000597146 NR2E3Q9Y5X4 410 aa19.89■□□□□ 0.77
LIG1-214ENST00000597146 PI4KAP2A4QPH2 592 aa19.88■□□□□ 0.77
LIG1-214ENST00000597146 GNRH1P01148 92 aa19.88■□□□□ 0.77
LIG1-214ENST00000597146 CCL5P13501 91 aa19.88■□□□□ 0.77
LIG1-214ENST00000597146 IL1R1P14778 569 aa19.88■□□□□ 0.77
LIG1-214ENST00000597146 PRMT2P55345 433 aa19.88■□□□□ 0.77
LIG1-214ENST00000597146 TNFAIP1Q13829 316 aa19.88■□□□□ 0.77
LIG1-214ENST00000597146 PI4KAP1Q8N8J0 262 aa19.88■□□□□ 0.77
LIG1-214ENST00000597146 NKX2-3Q8TAU0 364 aa19.88■□□□□ 0.77
LIG1-214ENST00000597146 RUNDC1Q96C34 613 aa19.88■□□□□ 0.77
LIG1-214ENST00000597146 CSADQ9Y600 493 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms