RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 BOLA2Q9H3K6 86 aa11.38□□□□□ -0.59
ZNF548-206ENST00000597047 ABCF2Q9UG63 623 aa11.38□□□□□ -0.59
ZNF548-206ENST00000597047 COL4A5P29400 1685 aa11.38□□□□□ -0.59
ZNF548-206ENST00000597047 DICER1Q9UPY3 1922 aaKnown RBP11.38□□□□□ -0.59
ZNF548-206ENST00000597047 TIAM2Q8IVF5 1701 aa11.38□□□□□ -0.59
ZNF548-206ENST00000597047 UQCRFS1P1P0C7P4 283 aa11.37□□□□□ -0.59
ZNF548-206ENST00000597047 C1QTNF8P60827 252 aa11.37□□□□□ -0.59
ZNF548-206ENST00000597047 NUCB1Q02818 461 aa11.37□□□□□ -0.59
ZNF548-206ENST00000597047 RBM26Q5T8P6 1007 aaKnown RBP11.37□□□□□ -0.59
ZNF548-206ENST00000597047 PI16Q6UXB8 463 aa11.37□□□□□ -0.59
ZNF548-206ENST00000597047 C15orf52Q6ZUT6 534 aaKnown RBP11.37□□□□□ -0.59
ZNF548-206ENST00000597047 CENPQQ7L2Z9 268 aaPredicted RBP11.37□□□□□ -0.59
ZNF548-206ENST00000597047 SKAP1Q86WV1 359 aa11.37□□□□□ -0.59
ZNF548-206ENST00000597047 IRS2Q9Y4H2 1338 aa11.36□□□□□ -0.59
ZNF548-206ENST00000597047 FZD9O00144 591 aa11.36□□□□□ -0.59
ZNF548-206ENST00000597047 IL1R1P14778 569 aa11.36□□□□□ -0.59
ZNF548-206ENST00000597047 RGS3P49796 1198 aa11.36□□□□□ -0.59
ZNF548-206ENST00000597047 SCARF1Q14162 830 aa11.36□□□□□ -0.59
ZNF548-206ENST00000597047 TBC1D9Q6ZT07 1266 aa11.36□□□□□ -0.59
ZNF548-206ENST00000597047 TDRD7Q8NHU6 1098 aaKnown RBP11.36□□□□□ -0.59
ZNF548-206ENST00000597047 DENND2AQ9ULE3 1009 aa11.36□□□□□ -0.59
ZNF548-206ENST00000597047 MYH13Q9UKX3 1938 aa11.36□□□□□ -0.59
ZNF548-206ENST00000597047 MX1P20591 662 aa11.35□□□□□ -0.59
ZNF548-206ENST00000597047 MCAMP43121 646 aa11.35□□□□□ -0.59
ZNF548-206ENST00000597047 ZAP70P43403 619 aa11.35□□□□□ -0.59
ZNF548-206ENST00000597047 GMPSP49915 693 aaPredicted RBP11.35□□□□□ -0.59
ZNF548-206ENST00000597047 RBM5P52756 815 aaKnown RBP eCLIP11.35□□□□□ -0.59
ZNF548-206ENST00000597047 RASGRF1Q13972 1273 aa11.35□□□□□ -0.59
ZNF548-206ENST00000597047 MFSD14BQ5SR56 506 aa11.35□□□□□ -0.59
ZNF548-206ENST00000597047 KIAA0825Q8IV33 1275 aa11.35□□□□□ -0.59
ZNF548-206ENST00000597047 SPATA5Q8NB90 893 aa11.35□□□□□ -0.59
ZNF548-206ENST00000597047 RRAGCQ9HB90 399 aa11.35□□□□□ -0.59
ZNF548-206ENST00000597047 ECHDC1Q9NTX5 307 aa11.35□□□□□ -0.59
ZNF548-206ENST00000597047 RAI14Q9P0K7 980 aa11.35□□□□□ -0.59
ZNF548-206ENST00000597047 HMG20BQ9P0W2 317 aa11.35□□□□□ -0.59
ZNF548-206ENST00000597047 ARAP2Q8WZ64 1704 aa11.35□□□□□ -0.59
ZNF548-206ENST00000597047 SCN9AQ15858 1988 aa11.34□□□□□ -0.59
ZNF548-206ENST00000597047 GLTPD2A6NH11 291 aa11.34□□□□□ -0.59
ZNF548-206ENST00000597047 GOLIM4O00461 696 aa11.34□□□□□ -0.59
ZNF548-206ENST00000597047 LMOD1P29536 600 aaPredicted RBP11.34□□□□□ -0.59
ZNF548-206ENST00000597047 SCNN1DP51172 638 aa11.34□□□□□ -0.59
ZNF548-206ENST00000597047 DACT2Q5SW24 774 aa11.34□□□□□ -0.59
ZNF548-206ENST00000597047 STRIP1Q5VSL9 837 aa11.34□□□□□ -0.59
ZNF548-206ENST00000597047 RSBN1LQ6PCB5 846 aaPredicted RBP11.34□□□□□ -0.59
ZNF548-206ENST00000597047 GPC2Q8N158 579 aa11.34□□□□□ -0.59
ZNF548-206ENST00000597047 EDC3Q96F86 508 aaKnown RBP11.34□□□□□ -0.59
ZNF548-206ENST00000597047 LRP2BPQ9P2M1 347 aa11.34□□□□□ -0.59
ZNF548-206ENST00000597047 SHTN1A0MZ66 631 aa11.33□□□□□ -0.6
ZNF548-206ENST00000597047 TRIM6-TRIM34B2RNG4 842 aa11.33□□□□□ -0.6
ZNF548-206ENST00000597047 ERC2O15083 957 aa11.33□□□□□ -0.6
ZNF548-206ENST00000597047 VIL1P09327 827 aaKnown RBP11.33□□□□□ -0.6
ZNF548-206ENST00000597047 PDE4AP27815 886 aa11.33□□□□□ -0.6
ZNF548-206ENST00000597047 ARID4AP29374 1257 aaPredicted RBP11.33□□□□□ -0.6
ZNF548-206ENST00000597047 GRIK5Q16478 980 aa11.33□□□□□ -0.6
ZNF548-206ENST00000597047 WDR66Q8TBY9 1149 aa11.33□□□□□ -0.6
ZNF548-206ENST00000597047 RILPL2Q969X0 211 aa11.33□□□□□ -0.6
ZNF548-206ENST00000597047 CNOT7Q9UIV1 285 aaKnown RBP11.33□□□□□ -0.6
ZNF548-206ENST00000597047 TTF2Q9UNY4 1162 aaKnown RBP11.33□□□□□ -0.6
ZNF548-206ENST00000597047 KDM2BQ8NHM5 1336 aa11.33□□□□□ -0.6
ZNF548-206ENST00000597047 H7C1D1 291 aa11.32□□□□□ -0.6
ZNF548-206ENST00000597047 SEMA3EO15041 775 aa11.32□□□□□ -0.6
ZNF548-206ENST00000597047 IDH1O75874 414 aaKnown RBP11.32□□□□□ -0.6
ZNF548-206ENST00000597047 LDHBP07195 334 aaKnown RBP11.32□□□□□ -0.6
ZNF548-206ENST00000597047 ATP5JP18859 108 aa11.32□□□□□ -0.6
ZNF548-206ENST00000597047 EPS15P42566 896 aa11.32□□□□□ -0.6
ZNF548-206ENST00000597047 PDE1AP54750 535 aa11.32□□□□□ -0.6
ZNF548-206ENST00000597047 TBC1D10BQ4KMP7 808 aaPredicted RBP11.32□□□□□ -0.6
ZNF548-206ENST00000597047 EAPPQ56P03 285 aaPredicted RBP11.32□□□□□ -0.6
ZNF548-206ENST00000597047 ERICH6Q7L0X2 663 aa11.32□□□□□ -0.6
ZNF548-206ENST00000597047 DZIP1Q86YF9 867 aaKnown RBP11.32□□□□□ -0.6
ZNF548-206ENST00000597047 MICALL2Q8IY33 904 aa11.32□□□□□ -0.6
ZNF548-206ENST00000597047 OGFOD1Q8N543 542 aa11.32□□□□□ -0.6
ZNF548-206ENST00000597047 CERS5Q8N5B7 392 aa11.32□□□□□ -0.6
ZNF548-206ENST00000597047 TBC1D22AQ8WUA7 517 aa11.32□□□□□ -0.6
ZNF548-206ENST00000597047 ANTXR1Q9H6X2 564 aa11.32□□□□□ -0.6
ZNF548-206ENST00000597047 HDAC9Q9UKV0 1011 aa11.32□□□□□ -0.6
ZNF548-206ENST00000597047 CLEC11AQ9Y240 323 aa11.32□□□□□ -0.6
ZNF548-206ENST00000597047 FAM205AQ6ZU69 1335 aa11.32□□□□□ -0.6
ZNF548-206ENST00000597047 CYP2E1P05181 493 aaPredicted RBP11.31□□□□□ -0.6
ZNF548-206ENST00000597047 USP17L8P0C7I0 530 aa11.31□□□□□ -0.6
ZNF548-206ENST00000597047 SPTY2D1Q68D10 685 aaPredicted RBP11.31□□□□□ -0.6
ZNF548-206ENST00000597047 PLEKHM2Q8IWE5 1019 aa11.31□□□□□ -0.6
ZNF548-206ENST00000597047 GPBP1L1Q9HC44 474 aaPredicted RBP11.31□□□□□ -0.6
ZNF548-206ENST00000597047 NMRK2Q9NPI5 230 aa11.31□□□□□ -0.6
ZNF548-206ENST00000597047 PIH1D3Q9NQM4 214 aaKnown RBP11.31□□□□□ -0.6
ZNF548-206ENST00000597047 PAG1Q9NWQ8 432 aa11.31□□□□□ -0.6
ZNF548-206ENST00000597047 TTC41PQ6P2S7 1318 aa11.31□□□□□ -0.6
ZNF548-206ENST00000597047 COL1A1P02452 1464 aaPredicted RBP11.31□□□□□ -0.6
ZNF548-206ENST00000597047 GLRX3O76003 335 aaKnown RBP11.3□□□□□ -0.6
ZNF548-206ENST00000597047 PRDX5P30044 214 aa11.3□□□□□ -0.6
ZNF548-206ENST00000597047 SAMD7Q7Z3H4 446 aa11.3□□□□□ -0.6
ZNF548-206ENST00000597047 ZGPATQ8N5A5 531 aaKnown RBP11.3□□□□□ -0.6
ZNF548-206ENST00000597047 AGBL3Q8NEM8 1001 aa11.3□□□□□ -0.6
ZNF548-206ENST00000597047 HAUS7Q99871 368 aa11.3□□□□□ -0.6
ZNF548-206ENST00000597047 HACL1Q9UJ83 578 aa11.3□□□□□ -0.6
ZNF548-206ENST00000597047 MYO3BQ8WXR4 1341 aa11.3□□□□□ -0.6
ZNF548-206ENST00000597047 ZC3H4Q9UPT8 1303 aaKnown RBP11.3□□□□□ -0.6
ZNF548-206ENST00000597047 RPS12P25398 132 aaKnown RBP11.29□□□□□ -0.6
ZNF548-206ENST00000597047 TTF1Q15361 905 aaPredicted RBP11.29□□□□□ -0.6
ZNF548-206ENST00000597047 DLGAP5Q15398 846 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms