RNA–Protein interactions for RNA: ENST00000595564.5

PAF1-204, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PAF1, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-204ENST00000595564 CTNNA3Q9UI47 895 aa17.32■□□□□ 0.36
PAF1-204ENST00000595564 A0A1B0GUL6 1792 aa17.32■□□□□ 0.36
PAF1-204ENST00000595564 A0A0G2JLW4 131 aa17.31■□□□□ 0.36
PAF1-204ENST00000595564 TM4SF1P30408 202 aa17.31■□□□□ 0.36
PAF1-204ENST00000595564 MAP3K12Q12852 859 aa17.31■□□□□ 0.36
PAF1-204ENST00000595564 TOB2Q14106 344 aaPredicted RBP17.31■□□□□ 0.36
PAF1-204ENST00000595564 GSE1Q14687 1217 aa17.31■□□□□ 0.36
PAF1-204ENST00000595564 TTLL5Q6EMB2 1281 aa17.31■□□□□ 0.36
PAF1-204ENST00000595564 PROM2Q8N271 834 aa17.31■□□□□ 0.36
PAF1-204ENST00000595564 WTIPA6NIX2 430 aaPredicted RBP17.31■□□□□ 0.36
PAF1-204ENST00000595564 FOXP2O15409 715 aa17.31■□□□□ 0.36
PAF1-204ENST00000595564 HMGB1P09429 215 aaKnown RBP17.31■□□□□ 0.36
PAF1-204ENST00000595564 GYG1P46976 350 aa17.31■□□□□ 0.36
PAF1-204ENST00000595564 FOXD4L5Q5VV16 416 aaPredicted RBP17.31■□□□□ 0.36
PAF1-204ENST00000595564 FOXD4L4Q8WXT5 416 aaPredicted RBP17.31■□□□□ 0.36
PAF1-204ENST00000595564 GNL3LQ9NVN8 582 aaKnown RBP17.31■□□□□ 0.36
PAF1-204ENST00000595564 SMC3Q9UQE7 1217 aa17.31■□□□□ 0.36
PAF1-204ENST00000595564 TNRC6CQ9HCJ0 1690 aaKnown RBP17.3■□□□□ 0.36
PAF1-204ENST00000595564 TCRBV5S4A2TA0A5A2 114 aa17.3■□□□□ 0.36
PAF1-204ENST00000595564 E7EWF7 191 aa17.3■□□□□ 0.36
PAF1-204ENST00000595564 GOLGA6L22H0YM25 854 aa17.3■□□□□ 0.36
PAF1-204ENST00000595564 TRAK2O60296 914 aa17.3■□□□□ 0.36
PAF1-204ENST00000595564 BRD1O95696 1058 aa17.3■□□□□ 0.36
PAF1-204ENST00000595564 PTMSP20962 102 aa17.3■□□□□ 0.36
PAF1-204ENST00000595564 CAVIN4Q5BKX8 364 aa17.3■□□□□ 0.36
PAF1-204ENST00000595564 MAGEB6Q8N7X4 407 aa17.3■□□□□ 0.36
PAF1-204ENST00000595564 NECAB1Q8N987 351 aa17.3■□□□□ 0.36
PAF1-204ENST00000595564 IQSEC3Q9UPP2 1182 aaPredicted RBP17.3■□□□□ 0.36
PAF1-204ENST00000595564 MYO5AQ9Y4I1 1855 aaKnown RBP17.3■□□□□ 0.36
PAF1-204ENST00000595564 FGAP02671 866 aa17.29■□□□□ 0.36
PAF1-204ENST00000595564 HMGB2P26583 209 aaKnown RBP17.29■□□□□ 0.36
PAF1-204ENST00000595564 IMMTQ16891 758 aaKnown RBP17.29■□□□□ 0.36
PAF1-204ENST00000595564 PRR5LQ6MZQ0 368 aa17.29■□□□□ 0.36
PAF1-204ENST00000595564 Q6ZUG5 572 aa17.29■□□□□ 0.36
PAF1-204ENST00000595564 ANKRD2Q9GZV1 360 aa17.29■□□□□ 0.36
PAF1-204ENST00000595564 ZNF804BA4D1E1 1349 aa17.29■□□□□ 0.36
PAF1-204ENST00000595564 ST3GAL1Q11201 340 aa17.28■□□□□ 0.36
PAF1-204ENST00000595564 DHX32Q7L7V1 743 aaKnown RBP17.28■□□□□ 0.36
PAF1-204ENST00000595564 VPS37DQ86XT2 251 aa17.28■□□□□ 0.36
PAF1-204ENST00000595564 MCTP1Q6DN14 999 aa17.28■□□□□ 0.36
PAF1-204ENST00000595564 AIDAQ96BJ3 306 aa17.28■□□□□ 0.36
PAF1-204ENST00000595564 DOCK2Q92608 1830 aa17.27■□□□□ 0.36
PAF1-204ENST00000595564 APBA3O96018 575 aa17.27■□□□□ 0.36
PAF1-204ENST00000595564 SERPINB2P05120 415 aa17.27■□□□□ 0.36
PAF1-204ENST00000595564 HAND2P61296 217 aa17.27■□□□□ 0.36
PAF1-204ENST00000595564 ST5P78524 1137 aa17.27■□□□□ 0.36
PAF1-204ENST00000595564 FGD1P98174 961 aa17.27■□□□□ 0.36
PAF1-204ENST00000595564 LRRC2Q9BYS8 371 aa17.27■□□□□ 0.36
PAF1-204ENST00000595564 LRP2BPQ9P2M1 347 aa17.27■□□□□ 0.36
PAF1-204ENST00000595564 WDR33Q9C0J8 1336 aaKnown RBP17.26■□□□□ 0.35
PAF1-204ENST00000595564 GJB2P29033 226 aa17.26■□□□□ 0.35
PAF1-204ENST00000595564 GRAPQ13588 217 aa17.26■□□□□ 0.35
PAF1-204ENST00000595564 GRAPLQ8TC17 118 aaPredicted RBP17.26■□□□□ 0.35
PAF1-204ENST00000595564 FAM84BQ96KN1 310 aaPredicted RBP17.26■□□□□ 0.35
PAF1-204ENST00000595564 ZNF213O14771 459 aa17.26■□□□□ 0.35
PAF1-204ENST00000595564 PLSCR1O15162 318 aa17.26■□□□□ 0.35
PAF1-204ENST00000595564 APPP05067 770 aa17.26■□□□□ 0.35
PAF1-204ENST00000595564 KLRK1P26718 216 aa17.26■□□□□ 0.35
PAF1-204ENST00000595564 EXOSC10Q01780 885 aaKnown RBP17.26■□□□□ 0.35
PAF1-204ENST00000595564 STK3Q13188 491 aa17.26■□□□□ 0.35
PAF1-204ENST00000595564 STRBPQ96SI9 672 aaKnown RBP17.26■□□□□ 0.35
PAF1-204ENST00000595564 TFCP2L1Q9NZI6 479 aa17.26■□□□□ 0.35
PAF1-204ENST00000595564 LAMA4Q16363 1823 aa17.25■□□□□ 0.35
PAF1-204ENST00000595564 MBD4O95243 580 aa17.25■□□□□ 0.35
PAF1-204ENST00000595564 FBXO33Q7Z6M2 555 aa17.25■□□□□ 0.35
PAF1-204ENST00000595564 RPGRQ92834 1020 aaKnown RBP17.25■□□□□ 0.35
PAF1-204ENST00000595564 BRF1Q92994 677 aa17.25■□□□□ 0.35
PAF1-204ENST00000595564 DENND2AQ9ULE3 1009 aa17.25■□□□□ 0.35
PAF1-204ENST00000595564 DTNBO60941 627 aa17.24■□□□□ 0.35
PAF1-204ENST00000595564 ZNF827Q17R98 1081 aa17.24■□□□□ 0.35
PAF1-204ENST00000595564 ABCF2Q9UG63 623 aa17.24■□□□□ 0.35
PAF1-204ENST00000595564 COL1A1P02452 1464 aaPredicted RBP17.24■□□□□ 0.35
PAF1-204ENST00000595564 STX6O43752 255 aa17.24■□□□□ 0.35
PAF1-204ENST00000595564 SYT1P21579 422 aa17.24■□□□□ 0.35
PAF1-204ENST00000595564 DDR1Q08345 913 aa17.24■□□□□ 0.35
PAF1-204ENST00000595564 SKOR2Q2VWA4 1001 aaPredicted RBP17.24■□□□□ 0.35
PAF1-204ENST00000595564 UPF1Q92900 1129 aaKnown RBP eCLIP17.24■□□□□ 0.35
PAF1-204ENST00000595564 ARMT1Q9H993 441 aa17.24■□□□□ 0.35
PAF1-204ENST00000595564 RAI14Q9P0K7 980 aa17.24■□□□□ 0.35
PAF1-204ENST00000595564 HIBADHP31937 336 aaKnown RBP17.23■□□□□ 0.35
PAF1-204ENST00000595564 CHST3Q7LGC8 479 aa17.23■□□□□ 0.35
PAF1-204ENST00000595564 CHAMP1Q96JM3 812 aa17.23■□□□□ 0.35
PAF1-204ENST00000595564 GZF1Q9H116 711 aaPredicted RBP17.23■□□□□ 0.35
PAF1-204ENST00000595564 ANKIB1Q9P2G1 1089 aa17.23■□□□□ 0.35
PAF1-204ENST00000595564 PATL2C9JE40 543 aaKnown RBP17.22■□□□□ 0.35
PAF1-204ENST00000595564 POLRMTO00411 1230 aaKnown RBP17.22■□□□□ 0.35
PAF1-204ENST00000595564 SEMA3EO15041 775 aa17.22■□□□□ 0.35
PAF1-204ENST00000595564 GTF3C6Q969F1 213 aa17.22■□□□□ 0.35
PAF1-204ENST00000595564 AKT1S1Q96B36 256 aa17.22■□□□□ 0.35
PAF1-204ENST00000595564 ZSCAN22P10073 491 aaPredicted RBP17.21■□□□□ 0.35
PAF1-204ENST00000595564 CYP7A1P22680 504 aa17.21■□□□□ 0.35
PAF1-204ENST00000595564 CRY2Q49AN0 593 aa17.21■□□□□ 0.35
PAF1-204ENST00000595564 LCORLQ8N3X6 602 aa17.21■□□□□ 0.35
PAF1-204ENST00000595564 NCOA7Q8NI08 942 aa17.21■□□□□ 0.35
PAF1-204ENST00000595564 RBM17Q96I25 401 aaKnown RBP17.21■□□□□ 0.35
PAF1-204ENST00000595564 AGXT2Q9BYV1 514 aa17.21■□□□□ 0.35
PAF1-204ENST00000595564 APOBRQ0VD83 1088 aa17.21■□□□□ 0.35
PAF1-204ENST00000595564 ALX1Q15699 326 aa17.21■□□□□ 0.35
PAF1-204ENST00000595564 RALYLQ86SE5 291 aaKnown RBP17.21■□□□□ 0.35
PAF1-204ENST00000595564 SLC51AQ86UW1 340 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms