RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 IGSF3O75054 1194 aa17.94■□□□□ 0.46
ZNF541-205ENST00000595558 EXOSC10Q01780 885 aaKnown RBP17.94■□□□□ 0.46
ZNF541-205ENST00000595558 CCDC57Q2TAC2 916 aa17.94■□□□□ 0.46
ZNF541-205ENST00000595558 LMTK3Q96Q04 1460 aa17.94■□□□□ 0.46
ZNF541-205ENST00000595558 E7EWF7 191 aa17.93■□□□□ 0.46
ZNF541-205ENST00000595558 ENGASEQ8NFI3 743 aa17.93■□□□□ 0.46
ZNF541-205ENST00000595558 OSBP2Q969R2 916 aa17.93■□□□□ 0.46
ZNF541-205ENST00000595558 GREM2Q9H772 168 aa17.93■□□□□ 0.46
ZNF541-205ENST00000595558 DENND2AQ9ULE3 1009 aa17.93■□□□□ 0.46
ZNF541-205ENST00000595558 DMTNQ08495 405 aa17.93■□□□□ 0.46
ZNF541-205ENST00000595558 GORABQ5T7V8 394 aa17.93■□□□□ 0.46
ZNF541-205ENST00000595558 NKX2-3Q8TAU0 364 aa17.93■□□□□ 0.46
ZNF541-205ENST00000595558 PKD1L3Q7Z443 1732 aa17.93■□□□□ 0.46
ZNF541-205ENST00000595558 SMTNL1A8MU46 457 aa17.92■□□□□ 0.46
ZNF541-205ENST00000595558 HSPD1P10809 573 aaKnown RBP17.92■□□□□ 0.46
ZNF541-205ENST00000595558 ME1P48163 572 aa17.92■□□□□ 0.46
ZNF541-205ENST00000595558 KCNQ4P56696 695 aa17.92■□□□□ 0.46
ZNF541-205ENST00000595558 FSIP1Q8NA03 581 aa17.92■□□□□ 0.46
ZNF541-205ENST00000595558 XAGE2Q96GT9 111 aa17.92■□□□□ 0.46
ZNF541-205ENST00000595558 GJB4Q9NTQ9 266 aa17.92■□□□□ 0.46
ZNF541-205ENST00000595558 FDPSP14324 419 aaKnown RBP17.92■□□□□ 0.46
ZNF541-205ENST00000595558 PDIA3P30101 505 aaKnown RBP17.92■□□□□ 0.46
ZNF541-205ENST00000595558 IL15P40933 162 aaPredicted RBP17.92■□□□□ 0.46
ZNF541-205ENST00000595558 STX1AQ16623 288 aa17.92■□□□□ 0.46
ZNF541-205ENST00000595558 NAA16Q6N069 864 aaPredicted RBP17.92■□□□□ 0.46
ZNF541-205ENST00000595558 LLPHQ9BRT6 129 aaKnown RBP17.92■□□□□ 0.46
ZNF541-205ENST00000595558 ISCA1Q9BUE6 129 aa17.92■□□□□ 0.46
ZNF541-205ENST00000595558 TRMT1Q9NXH9 659 aaKnown RBP17.92■□□□□ 0.46
ZNF541-205ENST00000595558 SH3TC1Q8TE82 1336 aa17.91■□□□□ 0.46
ZNF541-205ENST00000595558 LAMA4Q16363 1823 aa17.91■□□□□ 0.46
ZNF541-205ENST00000595558 ZAP70P43403 619 aa17.91■□□□□ 0.46
ZNF541-205ENST00000595558 TAF7LQ5H9L4 462 aa17.91■□□□□ 0.46
ZNF541-205ENST00000595558 CEP126Q9P2H0 1117 aa17.91■□□□□ 0.46
ZNF541-205ENST00000595558 SALL1Q9NSC2 1324 aa17.91■□□□□ 0.46
ZNF541-205ENST00000595558 EP400Q96L91 3159 aa17.91■□□□□ 0.46
ZNF541-205ENST00000595558 A0A1B0GVL5 298 aa17.91■□□□□ 0.46
ZNF541-205ENST00000595558 WASHC4Q2M389 1173 aa17.91■□□□□ 0.46
ZNF541-205ENST00000595558 AOPEPQ8N6M6 819 aa17.91■□□□□ 0.46
ZNF541-205ENST00000595558 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.91■□□□□ 0.46
ZNF541-205ENST00000595558 V9GYY5 206 aaPredicted RBP17.91■□□□□ 0.46
ZNF541-205ENST00000595558 MAST3O60307 1309 aa17.91■□□□□ 0.46
ZNF541-205ENST00000595558 BECN2A8MW95 431 aa17.9■□□□□ 0.46
ZNF541-205ENST00000595558 SKILP12757 684 aa17.9■□□□□ 0.46
ZNF541-205ENST00000595558 SARM1Q6SZW1 724 aa17.9■□□□□ 0.46
ZNF541-205ENST00000595558 CCDC73Q6ZRK6 1079 aa17.9■□□□□ 0.46
ZNF541-205ENST00000595558 PCDHA7Q9UN72 937 aa17.9■□□□□ 0.46
ZNF541-205ENST00000595558 KINO60870 393 aaKnown RBP17.9■□□□□ 0.46
ZNF541-205ENST00000595558 CDC25BP30305 580 aa17.9■□□□□ 0.46
ZNF541-205ENST00000595558 ZMYM1Q5SVZ6 1142 aa17.9■□□□□ 0.46
ZNF541-205ENST00000595558 RFX7Q2KHR2 1363 aa17.89■□□□□ 0.46
ZNF541-205ENST00000595558 CCDC69A6NI79 296 aa17.89■□□□□ 0.46
ZNF541-205ENST00000595558 FAM160A1Q05DH4 1040 aa17.89■□□□□ 0.46
ZNF541-205ENST00000595558 CEP135Q66GS9 1140 aa17.89■□□□□ 0.46
ZNF541-205ENST00000595558 CCDC112Q8NEF3 446 aa17.89■□□□□ 0.46
ZNF541-205ENST00000595558 MRFAP1L1Q96HT8 127 aa17.89■□□□□ 0.46
ZNF541-205ENST00000595558 AGXT2Q9BYV1 514 aa17.89■□□□□ 0.46
ZNF541-205ENST00000595558 PUS7LQ9H0K6 701 aaKnown RBP17.89■□□□□ 0.46
ZNF541-205ENST00000595558 POLR3DP05423 398 aaPredicted RBP17.89■□□□□ 0.45
ZNF541-205ENST00000595558 CCZ1BP86790 482 aa17.89■□□□□ 0.45
ZNF541-205ENST00000595558 CCZ1P86791 482 aaPredicted RBP17.89■□□□□ 0.45
ZNF541-205ENST00000595558 STRCQ7RTU9 1775 aa17.88■□□□□ 0.45
ZNF541-205ENST00000595558 FOXP2O15409 715 aa17.88■□□□□ 0.45
ZNF541-205ENST00000595558 DSCC1Q9BVC3 393 aa17.88■□□□□ 0.45
ZNF541-205ENST00000595558 CARMIL3Q8ND23 1372 aa17.88■□□□□ 0.45
ZNF541-205ENST00000595558 PALLDQ8WX93 1383 aa17.88■□□□□ 0.45
ZNF541-205ENST00000595558 HMGB1P09429 215 aaKnown RBP17.88■□□□□ 0.45
ZNF541-205ENST00000595558 ITGA6P23229 1130 aa17.88■□□□□ 0.45
ZNF541-205ENST00000595558 NDUFA8P51970 172 aa17.88■□□□□ 0.45
ZNF541-205ENST00000595558 LDHAL6AQ6ZMR3 332 aa17.88■□□□□ 0.45
ZNF541-205ENST00000595558 KIF6Q6ZMV9 814 aa17.88■□□□□ 0.45
ZNF541-205ENST00000595558 HELLSQ9NRZ9 838 aa17.88■□□□□ 0.45
ZNF541-205ENST00000595558 CLIC4Q9Y696 253 aa17.88■□□□□ 0.45
ZNF541-205ENST00000595558 IFIT5Q13325 482 aaKnown RBP17.87■□□□□ 0.45
ZNF541-205ENST00000595558 TTC39AQ5SRH9 613 aa17.87■□□□□ 0.45
ZNF541-205ENST00000595558 INCENPQ9NQS7 918 aa17.87■□□□□ 0.45
ZNF541-205ENST00000595558 WTIPA6NIX2 430 aaPredicted RBP17.87■□□□□ 0.45
ZNF541-205ENST00000595558 CTAGE5O15320 804 aa17.87■□□□□ 0.45
ZNF541-205ENST00000595558 CAVIN2O95810 425 aa17.87■□□□□ 0.45
ZNF541-205ENST00000595558 NBPF11Q86T75 865 aa17.87■□□□□ 0.45
ZNF541-205ENST00000595558 NLRP10Q86W26 655 aa17.87■□□□□ 0.45
ZNF541-205ENST00000595558 FMR1NBQ8N0W7 255 aaPredicted RBP17.87■□□□□ 0.45
ZNF541-205ENST00000595558 TRMT112Q9UI30 125 aaKnown RBP17.87■□□□□ 0.45
ZNF541-205ENST00000595558 NUTM2BA6NNL0 878 aaPredicted RBP17.86■□□□□ 0.45
ZNF541-205ENST00000595558 NUTM2EB1AL46 878 aaPredicted RBP17.86■□□□□ 0.45
ZNF541-205ENST00000595558 CYP19A1P11511 503 aaPredicted RBP17.86■□□□□ 0.45
ZNF541-205ENST00000595558 RBM6P78332 1123 aaKnown RBP17.86■□□□□ 0.45
ZNF541-205ENST00000595558 DPCR1Q3MIW9 517 aa17.86■□□□□ 0.45
ZNF541-205ENST00000595558 NUTM2AQ8IVF1 878 aaPredicted RBP17.86■□□□□ 0.45
ZNF541-205ENST00000595558 TTLL11Q8NHH1 800 aa17.86■□□□□ 0.45
ZNF541-205ENST00000595558 ZNF396Q96N95 335 aaPredicted RBP17.86■□□□□ 0.45
ZNF541-205ENST00000595558 CTNNA3Q9UI47 895 aa17.86■□□□□ 0.45
ZNF541-205ENST00000595558 BIN1O00499 593 aa17.86■□□□□ 0.45
ZNF541-205ENST00000595558 RNF113AO15541 343 aaKnown RBP17.86■□□□□ 0.45
ZNF541-205ENST00000595558 STARD3NLO95772 234 aa17.86■□□□□ 0.45
ZNF541-205ENST00000595558 METTL24Q5JXM2 366 aa17.86■□□□□ 0.45
ZNF541-205ENST00000595558 SDF4Q9BRK5 362 aa17.86■□□□□ 0.45
ZNF541-205ENST00000595558 ANO10Q9NW15 660 aa17.86■□□□□ 0.45
ZNF541-205ENST00000595558 ZNF215Q9UL58 517 aaPredicted RBP17.86■□□□□ 0.45
ZNF541-205ENST00000595558 PAXBP1Q9Y5B6 917 aa17.86■□□□□ 0.45
ZNF541-205ENST00000595558 NYAP1Q6ZVC0 841 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms