RNA–Protein interactions for RNA: ENST00000593639.5

SRRM1-221, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-221ENST00000593639 PRMT6Q96LA8 375 aaPredicted RBP11.87□□□□□ -0.51
SRRM1-221ENST00000593639 CD209Q9NNX6 404 aa11.87□□□□□ -0.51
SRRM1-221ENST00000593639 PTCH2Q9Y6C5 1203 aa11.87□□□□□ -0.51
SRRM1-221ENST00000593639 SPDYE2BA6NHP3 402 aa11.86□□□□□ -0.51
SRRM1-221ENST00000593639 F8W031 263 aaPredicted RBP11.86□□□□□ -0.51
SRRM1-221ENST00000593639 SNAP23O00161 211 aa11.86□□□□□ -0.51
SRRM1-221ENST00000593639 DDX58O95786 925 aaKnown RBP11.86□□□□□ -0.51
SRRM1-221ENST00000593639 MYCP01106 439 aaPredicted RBP11.86□□□□□ -0.51
SRRM1-221ENST00000593639 SPDYE6P0CI01 402 aa11.86□□□□□ -0.51
SRRM1-221ENST00000593639 IGHMBP2P38935 993 aaKnown RBP11.86□□□□□ -0.51
SRRM1-221ENST00000593639 RALBP1Q15311 655 aa11.86□□□□□ -0.51
SRRM1-221ENST00000593639 CWF19L2Q2TBE0 894 aaKnown RBP11.86□□□□□ -0.51
SRRM1-221ENST00000593639 CFAP100Q494V2 611 aa11.86□□□□□ -0.51
SRRM1-221ENST00000593639 SLC9C1Q4G0N8 1177 aa11.86□□□□□ -0.51
SRRM1-221ENST00000593639 C8orf58Q8NAV2 365 aa11.86□□□□□ -0.51
SRRM1-221ENST00000593639 MS4A4AQ96JQ5 239 aa11.86□□□□□ -0.51
SRRM1-221ENST00000593639 ANKRD2Q9GZV1 360 aa11.86□□□□□ -0.51
SRRM1-221ENST00000593639 VEZTQ9HBM0 779 aa11.86□□□□□ -0.51
SRRM1-221ENST00000593639 IRS2Q9Y4H2 1338 aa11.86□□□□□ -0.51
SRRM1-221ENST00000593639 PI4KAP2A4QPH2 592 aa11.85□□□□□ -0.51
SRRM1-221ENST00000593639 ITGA6P23229 1130 aa11.85□□□□□ -0.51
SRRM1-221ENST00000593639 IREB2P48200 963 aaKnown RBP11.85□□□□□ -0.51
SRRM1-221ENST00000593639 RASA3Q14644 834 aa11.85□□□□□ -0.51
SRRM1-221ENST00000593639 SLC4A8Q2Y0W8 1093 aa11.85□□□□□ -0.51
SRRM1-221ENST00000593639 KSR2Q6VAB6 950 aa11.85□□□□□ -0.51
SRRM1-221ENST00000593639 ANKRD13AQ8IZ07 590 aa11.85□□□□□ -0.51
SRRM1-221ENST00000593639 PI4KAP1Q8N8J0 262 aa11.85□□□□□ -0.51
SRRM1-221ENST00000593639 CNKSR2Q8WXI2 1034 aa11.85□□□□□ -0.51
SRRM1-221ENST00000593639 BRI3BPQ8WY22 251 aa11.85□□□□□ -0.51
SRRM1-221ENST00000593639 OPTNQ96CV9 577 aa11.85□□□□□ -0.51
SRRM1-221ENST00000593639 ELP3Q9H9T3 547 aa11.85□□□□□ -0.51
SRRM1-221ENST00000593639 IFT57Q9NWB7 429 aa11.85□□□□□ -0.51
SRRM1-221ENST00000593639 ADAMTS8Q9UP79 889 aa11.85□□□□□ -0.51
SRRM1-221ENST00000593639 ZNF646O15015 1829 aaPredicted RBP11.85□□□□□ -0.51
SRRM1-221ENST00000593639 COL6A3P12111 3177 aa11.84□□□□□ -0.51
SRRM1-221ENST00000593639 NEURL1BA8MQ27 555 aa11.84□□□□□ -0.51
SRRM1-221ENST00000593639 H7C1W4 665 aa11.84□□□□□ -0.51
SRRM1-221ENST00000593639 MYO1BO43795 1136 aa11.84□□□□□ -0.51
SRRM1-221ENST00000593639 KCNJ4P48050 445 aa11.84□□□□□ -0.51
SRRM1-221ENST00000593639 CHRNDQ07001 517 aa11.84□□□□□ -0.51
SRRM1-221ENST00000593639 CHRDL2Q6WN34 429 aa11.84□□□□□ -0.51
SRRM1-221ENST00000593639 UBE3BQ7Z3V4 1068 aa11.84□□□□□ -0.51
SRRM1-221ENST00000593639 NBPF11Q86T75 865 aa11.84□□□□□ -0.51
SRRM1-221ENST00000593639 CDAN1Q8IWY9 1227 aa11.84□□□□□ -0.51
SRRM1-221ENST00000593639 JAG2Q9Y219 1238 aa11.84□□□□□ -0.51
SRRM1-221ENST00000593639 WDR43Q15061 677 aaKnown RBP eCLIP11.83□□□□□ -0.52
SRRM1-221ENST00000593639 CCDC30Q5VVM6 783 aa11.83□□□□□ -0.52
SRRM1-221ENST00000593639 SH3TC2Q8TF17 1288 aa11.83□□□□□ -0.52
SRRM1-221ENST00000593639 MPHOSPH8Q99549 860 aa11.83□□□□□ -0.52
SRRM1-221ENST00000593639 CCL15-CCL14A0A0B4J2E2 113 aa11.82□□□□□ -0.52
SRRM1-221ENST00000593639 TAF5LO75529 589 aa11.82□□□□□ -0.52
SRRM1-221ENST00000593639 CSF1RP07333 972 aa11.82□□□□□ -0.52
SRRM1-221ENST00000593639 TAF1CQ15572 869 aaPredicted RBP11.82□□□□□ -0.52
SRRM1-221ENST00000593639 CCL15Q16663 113 aa11.82□□□□□ -0.52
SRRM1-221ENST00000593639 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.82□□□□□ -0.52
SRRM1-221ENST00000593639 C15orf52Q6ZUT6 534 aaKnown RBP11.82□□□□□ -0.52
SRRM1-221ENST00000593639 FAM43AQ8N2R8 423 aa11.82□□□□□ -0.52
SRRM1-221ENST00000593639 TSPYL6Q8N831 410 aa11.82□□□□□ -0.52
SRRM1-221ENST00000593639 PLA2G12BQ9BX93 195 aa11.82□□□□□ -0.52
SRRM1-221ENST00000593639 ARHGAP39Q9C0H5 1083 aa11.82□□□□□ -0.52
SRRM1-221ENST00000593639 ZFYVE28Q9HCC9 887 aa11.82□□□□□ -0.52
SRRM1-221ENST00000593639 RBM27Q9P2N5 1060 aaKnown RBP11.82□□□□□ -0.52
SRRM1-221ENST00000593639 RBBP6Q7Z6E9 1792 aaKnown RBP11.82□□□□□ -0.52
SRRM1-221ENST00000593639 IL1R1P14778 569 aa11.81□□□□□ -0.52
SRRM1-221ENST00000593639 CASP7P55210 303 aa11.81□□□□□ -0.52
SRRM1-221ENST00000593639 FKBP1AP62942 108 aaKnown RBP11.81□□□□□ -0.52
SRRM1-221ENST00000593639 GNAI1P63096 354 aa11.81□□□□□ -0.52
SRRM1-221ENST00000593639 NEXNQ0ZGT2 675 aa11.81□□□□□ -0.52
SRRM1-221ENST00000593639 VGLL4Q14135 290 aa11.81□□□□□ -0.52
SRRM1-221ENST00000593639 ARHGEF6Q15052 776 aa11.81□□□□□ -0.52
SRRM1-221ENST00000593639 HELBQ8NG08 1087 aaPredicted RBP11.81□□□□□ -0.52
SRRM1-221ENST00000593639 SHISA4Q96DD7 197 aa11.81□□□□□ -0.52
SRRM1-221ENST00000593639 TEPSINQ96N21 525 aa11.81□□□□□ -0.52
SRRM1-221ENST00000593639 MYBBP1AQ9BQG0 1328 aaKnown RBP11.81□□□□□ -0.52
SRRM1-221ENST00000593639 GTF2A2P52657 109 aa11.8□□□□□ -0.52
SRRM1-221ENST00000593639 RBM5P52756 815 aaKnown RBP eCLIP11.8□□□□□ -0.52
SRRM1-221ENST00000593639 GCKRQ14397 625 aa11.8□□□□□ -0.52
SRRM1-221ENST00000593639 SPDYE2Q495Y8 402 aa11.8□□□□□ -0.52
SRRM1-221ENST00000593639 G2E3Q7L622 706 aa11.8□□□□□ -0.52
SRRM1-221ENST00000593639 ZNF70Q9UC06 446 aaPredicted RBP11.8□□□□□ -0.52
SRRM1-221ENST00000593639 DLL1O00548 723 aa11.79□□□□□ -0.52
SRRM1-221ENST00000593639 APAF1O14727 1248 aa11.79□□□□□ -0.52
SRRM1-221ENST00000593639 TLR2O60603 784 aa11.79□□□□□ -0.52
SRRM1-221ENST00000593639 MAP3K9P80192 1104 aa11.79□□□□□ -0.52
SRRM1-221ENST00000593639 LACTBP83111 547 aaPredicted RBP11.79□□□□□ -0.52
SRRM1-221ENST00000593639 MTFR1Q15390 333 aa11.79□□□□□ -0.52
SRRM1-221ENST00000593639 ZNF804AQ7Z570 1209 aa11.79□□□□□ -0.52
SRRM1-221ENST00000593639 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.79□□□□□ -0.52
SRRM1-221ENST00000593639 TDRD3Q9H7E2 651 aaKnown RBP11.79□□□□□ -0.52
SRRM1-221ENST00000593639 CUL9Q8IWT3 2517 aa11.78□□□□□ -0.52
SRRM1-221ENST00000593639 ANKRD18BA2A2Z9 1011 aa11.78□□□□□ -0.52
SRRM1-221ENST00000593639 CALD1Q05682 793 aaKnown RBP11.78□□□□□ -0.52
SRRM1-221ENST00000593639 TNFAIP1Q13829 316 aa11.78□□□□□ -0.52
SRRM1-221ENST00000593639 DPF3Q92784 378 aa11.78□□□□□ -0.52
SRRM1-221ENST00000593639 TMEM39BQ9GZU3 492 aa11.78□□□□□ -0.52
SRRM1-221ENST00000593639 PRO3102Q9H379 93 aa11.78□□□□□ -0.52
SRRM1-221ENST00000593639 SPDYE5A6NIY4 337 aa11.77□□□□□ -0.53
SRRM1-221ENST00000593639 TCP10L2B9ZVM9 353 aa11.77□□□□□ -0.53
SRRM1-221ENST00000593639 BTBD19C9JJ37 291 aa11.77□□□□□ -0.53
SRRM1-221ENST00000593639 ECM2O94769 699 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms