RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 ANKRD2Q9GZV1 360 aa16.36■□□□□ 0.21
VMP1-217ENST00000593168 BOLA2Q9H3K6 86 aa16.36■□□□□ 0.21
VMP1-217ENST00000593168 MINPP1Q9UNW1 487 aa16.36■□□□□ 0.21
VMP1-217ENST00000593168 TAF1P21675 1872 aa16.35■□□□□ 0.21
VMP1-217ENST00000593168 COL4A1P02462 1669 aa16.35■□□□□ 0.21
VMP1-217ENST00000593168 IFIT1P09914 478 aaKnown RBP16.35■□□□□ 0.21
VMP1-217ENST00000593168 SLC5A1P13866 664 aa16.35■□□□□ 0.21
VMP1-217ENST00000593168 ADORA1P30542 326 aa16.35■□□□□ 0.21
VMP1-217ENST00000593168 FMR1Q06787 632 aaKnown RBP eCLIP16.35■□□□□ 0.21
VMP1-217ENST00000593168 UBE4AQ14139 1066 aa16.35■□□□□ 0.21
VMP1-217ENST00000593168 GORABQ5T7V8 394 aa16.35■□□□□ 0.21
VMP1-217ENST00000593168 SLC51AQ86UW1 340 aa16.35■□□□□ 0.21
VMP1-217ENST00000593168 HELBQ8NG08 1087 aaPredicted RBP16.35■□□□□ 0.21
VMP1-217ENST00000593168 TAF5LO75529 589 aa16.34■□□□□ 0.21
VMP1-217ENST00000593168 BBOX1O75936 387 aa16.34■□□□□ 0.21
VMP1-217ENST00000593168 TICAM2Q86XR7 235 aa16.34■□□□□ 0.21
VMP1-217ENST00000593168 JDP2Q8WYK2 163 aa16.34■□□□□ 0.21
VMP1-217ENST00000593168 ABHD8Q96I13 439 aa16.34■□□□□ 0.21
VMP1-217ENST00000593168 UPF2Q9HAU5 1272 aaKnown RBP16.34■□□□□ 0.21
VMP1-217ENST00000593168 ABT1Q9ULW3 272 aaKnown RBP16.34■□□□□ 0.21
VMP1-217ENST00000593168 GJA3Q9Y6H8 435 aa16.34■□□□□ 0.21
VMP1-217ENST00000593168 SPEF2Q9C093 1822 aa16.33■□□□□ 0.21
VMP1-217ENST00000593168 MAP4K4O95819 1239 aaPredicted RBP16.33■□□□□ 0.2
VMP1-217ENST00000593168 CHMLP26374 656 aa16.33■□□□□ 0.2
VMP1-217ENST00000593168 MAP2K1Q02750 393 aaPredicted RBP16.33■□□□□ 0.2
VMP1-217ENST00000593168 TTC39AQ5SRH9 613 aa16.33■□□□□ 0.2
VMP1-217ENST00000593168 EIF6P56537 245 aaKnown RBP16.32■□□□□ 0.2
VMP1-217ENST00000593168 TMC4Q7Z404 712 aa16.32■□□□□ 0.2
VMP1-217ENST00000593168 AK9Q5TCS8 1911 aa16.31■□□□□ 0.2
VMP1-217ENST00000593168 HIP1O00291 1037 aa16.31■□□□□ 0.2
VMP1-217ENST00000593168 UQCRFS1P1P0C7P4 283 aa16.31■□□□□ 0.2
VMP1-217ENST00000593168 EPS15P42566 896 aa16.31■□□□□ 0.2
VMP1-217ENST00000593168 SCNN1DP51172 638 aa16.31■□□□□ 0.2
VMP1-217ENST00000593168 CCDC102BQ68D86 513 aa16.31■□□□□ 0.2
VMP1-217ENST00000593168 A0A1B0GUL6 1792 aa16.31■□□□□ 0.2
VMP1-217ENST00000593168 ARAP2Q8WZ64 1704 aa16.31■□□□□ 0.2
VMP1-217ENST00000593168 ARID4AP29374 1257 aaPredicted RBP16.3■□□□□ 0.2
VMP1-217ENST00000593168 LMOD1P29536 600 aaPredicted RBP16.3■□□□□ 0.2
VMP1-217ENST00000593168 MFAP1P55081 439 aaKnown RBP16.3■□□□□ 0.2
VMP1-217ENST00000593168 CC2D2BQ6DHV5 1058 aa16.3■□□□□ 0.2
VMP1-217ENST00000593168 CAPNS2Q96L46 248 aa16.3■□□□□ 0.2
VMP1-217ENST00000593168 RFX7Q2KHR2 1363 aa16.29■□□□□ 0.2
VMP1-217ENST00000593168 TRAF5O00463 557 aa16.29■□□□□ 0.2
VMP1-217ENST00000593168 CST9Q5W186 159 aa16.29■□□□□ 0.2
VMP1-217ENST00000593168 CYP4F22Q6NT55 531 aa16.29■□□□□ 0.2
VMP1-217ENST00000593168 LARGE2Q8N3Y3 721 aa16.29■□□□□ 0.2
VMP1-217ENST00000593168 DNAJC2Q99543 621 aaKnown RBP16.29■□□□□ 0.2
VMP1-217ENST00000593168 ESYT1Q9BSJ8 1104 aa16.29■□□□□ 0.2
VMP1-217ENST00000593168 PAG1Q9NWQ8 432 aa16.29■□□□□ 0.2
VMP1-217ENST00000593168 LEMD3Q9Y2U8 911 aa16.29■□□□□ 0.2
VMP1-217ENST00000593168 SNAP23O00161 211 aa16.28■□□□□ 0.2
VMP1-217ENST00000593168 ZBTB22O15209 634 aa16.28■□□□□ 0.2
VMP1-217ENST00000593168 REC8O95072 547 aa16.28■□□□□ 0.2
VMP1-217ENST00000593168 PHKA1P46020 1223 aa16.28■□□□□ 0.2
VMP1-217ENST00000593168 KCNJ4P48050 445 aa16.28■□□□□ 0.2
VMP1-217ENST00000593168 GRM1Q13255 1194 aa16.28■□□□□ 0.2
VMP1-217ENST00000593168 PAXIP1Q6ZW49 1069 aaPredicted RBP16.28■□□□□ 0.2
VMP1-217ENST00000593168 SP8Q8IXZ3 490 aa16.28■□□□□ 0.2
VMP1-217ENST00000593168 KBTBD3Q8NAB2 608 aa16.28■□□□□ 0.2
VMP1-217ENST00000593168 RUFY2Q8WXA3 655 aa16.28■□□□□ 0.2
VMP1-217ENST00000593168 TBC1D32Q96NH3 1257 aa16.28■□□□□ 0.2
VMP1-217ENST00000593168 FSD1Q9BTV5 496 aa16.28■□□□□ 0.2
VMP1-217ENST00000593168 ZNF804BA4D1E1 1349 aa16.27■□□□□ 0.2
VMP1-217ENST00000593168 XDHP47989 1333 aa16.27■□□□□ 0.2
VMP1-217ENST00000593168 PPEF1O14829 653 aaPredicted RBP16.27■□□□□ 0.2
VMP1-217ENST00000593168 EPB41L2O43491 1005 aaKnown RBP16.27■□□□□ 0.2
VMP1-217ENST00000593168 MCAMP43121 646 aa16.27■□□□□ 0.2
VMP1-217ENST00000593168 CAVIN4Q5BKX8 364 aa16.27■□□□□ 0.2
VMP1-217ENST00000593168 USP50Q70EL3 339 aaPredicted RBP16.27■□□□□ 0.2
VMP1-217ENST00000593168 EDC3Q96F86 508 aaKnown RBP16.27■□□□□ 0.2
VMP1-217ENST00000593168 GPR101Q96P66 508 aaPredicted RBP16.27■□□□□ 0.2
VMP1-217ENST00000593168 C22orf23Q9BZE7 217 aa16.27■□□□□ 0.2
VMP1-217ENST00000593168 DIAPH3Q9NSV4 1193 aa16.27■□□□□ 0.2
VMP1-217ENST00000593168 GOLIM4O00461 696 aa16.26■□□□□ 0.19
VMP1-217ENST00000593168 SGSM2O43147 1006 aa16.26■□□□□ 0.19
VMP1-217ENST00000593168 SLC34A2O95436 690 aa16.26■□□□□ 0.19
VMP1-217ENST00000593168 ATP2B4P23634 1241 aa16.26■□□□□ 0.19
VMP1-217ENST00000593168 ECE1P42892 770 aa16.26■□□□□ 0.19
VMP1-217ENST00000593168 BCAMP50895 628 aa16.26■□□□□ 0.19
VMP1-217ENST00000593168 SCARF1Q14162 830 aa16.26■□□□□ 0.19
VMP1-217ENST00000593168 LRRFIP1Q32MZ4 808 aaKnown RBP16.26■□□□□ 0.19
VMP1-217ENST00000593168 C15orf52Q6ZUT6 534 aaKnown RBP16.26■□□□□ 0.19
VMP1-217ENST00000593168 FBXO33Q7Z6M2 555 aa16.26■□□□□ 0.19
VMP1-217ENST00000593168 GNL3LQ9NVN8 582 aaKnown RBP16.26■□□□□ 0.19
VMP1-217ENST00000593168 PODXL2Q9NZ53 605 aa16.26■□□□□ 0.19
VMP1-217ENST00000593168 ANKIB1Q9P2G1 1089 aa16.26■□□□□ 0.19
VMP1-217ENST00000593168 ATP6V0A2Q9Y487 856 aa16.26■□□□□ 0.19
VMP1-217ENST00000593168 TLL2Q9Y6L7 1015 aa16.26■□□□□ 0.19
VMP1-217ENST00000593168 AKAP11Q9UKA4 1901 aa16.25■□□□□ 0.19
VMP1-217ENST00000593168 AOC2O75106 756 aa16.25■□□□□ 0.19
VMP1-217ENST00000593168 ZAP70P43403 619 aa16.25■□□□□ 0.19
VMP1-217ENST00000593168 RBM25P49756 843 aaKnown RBP16.25■□□□□ 0.19
VMP1-217ENST00000593168 TTF1Q15361 905 aaPredicted RBP16.25■□□□□ 0.19
VMP1-217ENST00000593168 GRIPAP1Q4V328 841 aa16.25■□□□□ 0.19
VMP1-217ENST00000593168 CWC27Q6UX04 472 aaKnown RBP16.25■□□□□ 0.19
VMP1-217ENST00000593168 NIM1KQ8IY84 436 aa16.25■□□□□ 0.19
VMP1-217ENST00000593168 FAM84BQ96KN1 310 aaPredicted RBP16.25■□□□□ 0.19
VMP1-217ENST00000593168 USP26Q9BXU7 913 aa16.25■□□□□ 0.19
VMP1-217ENST00000593168 SNRKQ9NRH2 765 aa16.25■□□□□ 0.19
VMP1-217ENST00000593168 HMG20BQ9P0W2 317 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms