RNA–Protein interactions for RNA: ENST00000593013.5

HDAC5-212, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 1,745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-212ENST00000593013 NLRP3Q96P20 1036 aa22.28■■□□□ 1.16
HDAC5-212ENST00000593013 MAST3O60307 1309 aa22.28■■□□□ 1.16
HDAC5-212ENST00000593013 KLRG2A4D1S0 409 aaPredicted RBP22.28■■□□□ 1.16
HDAC5-212ENST00000593013 TPCN1Q9ULQ1 816 aa22.28■■□□□ 1.16
HDAC5-212ENST00000593013 CYP21A2P08686 494 aa22.27■■□□□ 1.16
HDAC5-212ENST00000593013 CCDC152Q4G0S7 254 aa22.27■■□□□ 1.16
HDAC5-212ENST00000593013 CCDC83Q8IWF9 413 aa22.27■■□□□ 1.16
HDAC5-212ENST00000593013 SGIP1Q9BQI5 828 aa22.27■■□□□ 1.16
HDAC5-212ENST00000593013 BRIP1Q9BX63 1249 aa22.27■■□□□ 1.16
HDAC5-212ENST00000593013 CNNM1Q9NRU3 951 aa22.27■■□□□ 1.16
HDAC5-212ENST00000593013 COL9A3Q14050 684 aaPredicted RBP22.26■■□□□ 1.15
HDAC5-212ENST00000593013 TOB2Q14106 344 aaPredicted RBP22.26■■□□□ 1.15
HDAC5-212ENST00000593013 CRY2Q49AN0 593 aa22.26■■□□□ 1.15
HDAC5-212ENST00000593013 NEK1Q96PY6 1258 aa22.26■■□□□ 1.15
HDAC5-212ENST00000593013 LARP6Q9BRS8 491 aaKnown RBP22.26■■□□□ 1.15
HDAC5-212ENST00000593013 SPON1Q9HCB6 807 aa22.26■■□□□ 1.15
HDAC5-212ENST00000593013 MROH5Q6ZUA9 1318 aa22.26■■□□□ 1.15
HDAC5-212ENST00000593013 PDE8BO95263 885 aa22.26■■□□□ 1.15
HDAC5-212ENST00000593013 PDIA4P13667 645 aaKnown RBP22.26■■□□□ 1.15
HDAC5-212ENST00000593013 MRE11P49959 708 aa22.26■■□□□ 1.15
HDAC5-212ENST00000593013 STX6O43752 255 aa22.25■■□□□ 1.15
HDAC5-212ENST00000593013 PRPF40AO75400 957 aaKnown RBP22.25■■□□□ 1.15
HDAC5-212ENST00000593013 ZSCAN22P10073 491 aaPredicted RBP22.25■■□□□ 1.15
HDAC5-212ENST00000593013 SYT1P21579 422 aa22.25■■□□□ 1.15
HDAC5-212ENST00000593013 SCARF1Q14162 830 aa22.25■■□□□ 1.15
HDAC5-212ENST00000593013 FGFR2P21802 821 aa22.24■■□□□ 1.15
HDAC5-212ENST00000593013 POLD1P28340 1107 aa22.24■■□□□ 1.15
HDAC5-212ENST00000593013 SRCAPQ6ZRS2 3230 aa22.24■■□□□ 1.15
HDAC5-212ENST00000593013 TCHHQ07283 1943 aa22.24■■□□□ 1.15
HDAC5-212ENST00000593013 TAF1P21675 1872 aa22.24■■□□□ 1.15
HDAC5-212ENST00000593013 DOCK2Q92608 1830 aa22.24■■□□□ 1.15
HDAC5-212ENST00000593013 HMGB1P09429 215 aaKnown RBP22.23■■□□□ 1.15
HDAC5-212ENST00000593013 HSPD1P10809 573 aaKnown RBP22.23■■□□□ 1.15
HDAC5-212ENST00000593013 XRCC6P12956 609 aaKnown RBP eCLIP22.23■■□□□ 1.15
HDAC5-212ENST00000593013 GJB2P29033 226 aa22.23■■□□□ 1.15
HDAC5-212ENST00000593013 PTGER2P43116 358 aa22.23■■□□□ 1.15
HDAC5-212ENST00000593013 FKBP4Q02790 459 aaKnown RBP eCLIP22.23■■□□□ 1.15
HDAC5-212ENST00000593013 FOXD4L5Q5VV16 416 aaPredicted RBP22.23■■□□□ 1.15
HDAC5-212ENST00000593013 TMEM87AQ8NBN3 555 aa22.23■■□□□ 1.15
HDAC5-212ENST00000593013 FOXD4L4Q8WXT5 416 aaPredicted RBP22.23■■□□□ 1.15
HDAC5-212ENST00000593013 SEC31BQ9NQW1 1179 aa22.23■■□□□ 1.15
HDAC5-212ENST00000593013 COL4A1P02462 1669 aa22.23■■□□□ 1.15
HDAC5-212ENST00000593013 M0R2C6 588 aa22.23■■□□□ 1.15
HDAC5-212ENST00000593013 MBD3O95983 291 aa22.23■■□□□ 1.15
HDAC5-212ENST00000593013 ARID4AP29374 1257 aaPredicted RBP22.23■■□□□ 1.15
HDAC5-212ENST00000593013 ZAP70P43403 619 aa22.23■■□□□ 1.15
HDAC5-212ENST00000593013 ZNF445P59923 1031 aa22.23■■□□□ 1.15
HDAC5-212ENST00000593013 GPT2Q8TD30 523 aa22.23■■□□□ 1.15
HDAC5-212ENST00000593013 OSBP2Q969R2 916 aa22.23■■□□□ 1.15
HDAC5-212ENST00000593013 A0A1B0GUL6 1792 aa22.22■■□□□ 1.15
HDAC5-212ENST00000593013 C10orf71Q711Q0 1435 aa22.22■■□□□ 1.15
HDAC5-212ENST00000593013 PUM3Q15397 648 aaKnown RBP22.22■■□□□ 1.15
HDAC5-212ENST00000593013 SLFNL1Q499Z3 407 aa22.22■■□□□ 1.15
HDAC5-212ENST00000593013 STOX1Q6ZVD7 989 aa22.22■■□□□ 1.15
HDAC5-212ENST00000593013 APPBP2Q92624 585 aa22.22■■□□□ 1.15
HDAC5-212ENST00000593013 BRPF3Q9ULD4 1205 aa22.22■■□□□ 1.15
HDAC5-212ENST00000593013 MCAMP43121 646 aa22.21■■□□□ 1.15
HDAC5-212ENST00000593013 LPIN2Q92539 896 aa22.21■■□□□ 1.15
HDAC5-212ENST00000593013 CHAMP1Q96JM3 812 aa22.21■■□□□ 1.15
HDAC5-212ENST00000593013 KIF13BQ9NQT8 1826 aa22.21■■□□□ 1.15
HDAC5-212ENST00000593013 MYO5AQ9Y4I1 1855 aaKnown RBP22.21■■□□□ 1.15
HDAC5-212ENST00000593013 F13A1P00488 732 aa22.2■■□□□ 1.14
HDAC5-212ENST00000593013 UQCRFS1P1P0C7P4 283 aa22.2■■□□□ 1.14
HDAC5-212ENST00000593013 PDE6BP35913 854 aa22.2■■□□□ 1.14
HDAC5-212ENST00000593013 TTF1Q15361 905 aaPredicted RBP22.2■■□□□ 1.14
HDAC5-212ENST00000593013 GRPEL1Q9HAV7 217 aa22.2■■□□□ 1.14
HDAC5-212ENST00000593013 HOXA10P31260 410 aaPredicted RBP22.2■■□□□ 1.14
HDAC5-212ENST00000593013 GAS2L3Q86XJ1 694 aa22.2■■□□□ 1.14
HDAC5-212ENST00000593013 NECAB1Q8N987 351 aa22.2■■□□□ 1.14
HDAC5-212ENST00000593013 TCEANC2Q96MN5 208 aa22.2■■□□□ 1.14
HDAC5-212ENST00000593013 MTMR6Q9Y217 621 aa22.2■■□□□ 1.14
HDAC5-212ENST00000593013 ATP6V1DQ9Y5K8 247 aa22.2■■□□□ 1.14
HDAC5-212ENST00000593013 COL11A2P13942 1736 aaPredicted RBP22.19■■□□□ 1.14
HDAC5-212ENST00000593013 SRGNP10124 158 aa22.19■■□□□ 1.14
HDAC5-212ENST00000593013 ZSCAN25Q6NSZ9 544 aa22.19■■□□□ 1.14
HDAC5-212ENST00000593013 AGXT2Q9BYV1 514 aa22.19■■□□□ 1.14
HDAC5-212ENST00000593013 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.19■■□□□ 1.149e-7■■■■■ 31.5
HDAC5-212ENST00000593013 GOLGB1Q14789 3259 aaKnown RBP22.19■■□□□ 1.14
HDAC5-212ENST00000593013 DHX32Q7L7V1 743 aaKnown RBP22.18■■□□□ 1.14
HDAC5-212ENST00000593013 FOXP2O15409 715 aa22.17■■□□□ 1.14
HDAC5-212ENST00000593013 PDCP20941 246 aa22.17■■□□□ 1.14
HDAC5-212ENST00000593013 EXOSC10Q01780 885 aaKnown RBP22.17■■□□□ 1.14
HDAC5-212ENST00000593013 CCDC102BQ68D86 513 aa22.17■■□□□ 1.14
HDAC5-212ENST00000593013 CAVIN1Q6NZI2 390 aaKnown RBP22.17■■□□□ 1.14
HDAC5-212ENST00000593013 CELF1Q92879 486 aaKnown RBP22.17■■□□□ 1.14
HDAC5-212ENST00000593013 GTF3C6Q969F1 213 aa22.17■■□□□ 1.14
HDAC5-212ENST00000593013 CDC5LQ99459 802 aaKnown RBP22.17■■□□□ 1.14
HDAC5-212ENST00000593013 CTNNA3Q9UI47 895 aa22.17■■□□□ 1.14
HDAC5-212ENST00000593013 ZSCAN23Q3MJ62 389 aa22.17■■□□□ 1.14
HDAC5-212ENST00000593013 PI16Q6UXB8 463 aa22.17■■□□□ 1.14
HDAC5-212ENST00000593013 Q6ZUG5 572 aa22.17■■□□□ 1.14
HDAC5-212ENST00000593013 RPGRQ92834 1020 aaKnown RBP22.17■■□□□ 1.14
HDAC5-212ENST00000593013 SLC5A1P13866 664 aa22.16■■□□□ 1.14
HDAC5-212ENST00000593013 ADD2P35612 726 aa22.16■■□□□ 1.14
HDAC5-212ENST00000593013 FBXL16Q8N461 479 aa22.16■■□□□ 1.14
HDAC5-212ENST00000593013 E7EWF7 191 aa22.15■■□□□ 1.14
HDAC5-212ENST00000593013 PHKA1P46020 1223 aa22.15■■□□□ 1.14
HDAC5-212ENST00000593013 RPS8P62241 208 aaKnown RBP22.15■■□□□ 1.14
HDAC5-212ENST00000593013 UBE3CQ15386 1083 aa22.15■■□□□ 1.14
HDAC5-212ENST00000593013 WASHC4Q2M389 1173 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms