RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 UQCRFS1P1P0C7P4 283 aa19.48■□□□□ 0.71
PRKCSH-217ENST00000592741 MROH5Q6ZUA9 1318 aa19.47■□□□□ 0.71
PRKCSH-217ENST00000592741 ZNF213O14771 459 aa19.47■□□□□ 0.71
PRKCSH-217ENST00000592741 OFD1O75665 1012 aa19.47■□□□□ 0.71
PRKCSH-217ENST00000592741 FOSBP53539 338 aa19.47■□□□□ 0.71
PRKCSH-217ENST00000592741 RALYLQ86SE5 291 aaKnown RBP19.47■□□□□ 0.71
PRKCSH-217ENST00000592741 MB21D2Q8IYB1 491 aaPredicted RBP19.47■□□□□ 0.71
PRKCSH-217ENST00000592741 NCOA7Q8NI08 942 aa19.47■□□□□ 0.71
PRKCSH-217ENST00000592741 PRC1O43663 620 aa19.46■□□□□ 0.71
PRKCSH-217ENST00000592741 ARID4AP29374 1257 aaPredicted RBP19.46■□□□□ 0.71
PRKCSH-217ENST00000592741 PUM3Q15397 648 aaKnown RBP19.46■□□□□ 0.71
PRKCSH-217ENST00000592741 CAMK4Q16566 473 aa19.46■□□□□ 0.71
PRKCSH-217ENST00000592741 PGBD1Q96JS3 809 aa19.46■□□□□ 0.71
PRKCSH-217ENST00000592741 CLSTN2Q9H4D0 955 aa19.46■□□□□ 0.71
PRKCSH-217ENST00000592741 ARAP2Q8WZ64 1704 aa19.46■□□□□ 0.71
PRKCSH-217ENST00000592741 SLC9C2Q5TAH2 1124 aa19.46■□□□□ 0.71
PRKCSH-217ENST00000592741 ATL3Q6DD88 541 aa19.46■□□□□ 0.71
PRKCSH-217ENST00000592741 WDR19Q8NEZ3 1342 aa19.46■□□□□ 0.71
PRKCSH-217ENST00000592741 CARMIL3Q8ND23 1372 aa19.46■□□□□ 0.71
PRKCSH-217ENST00000592741 EIF5P55010 431 aaKnown RBP19.45■□□□□ 0.7
PRKCSH-217ENST00000592741 UBE3CQ15386 1083 aa19.45■□□□□ 0.7
PRKCSH-217ENST00000592741 DDB1Q16531 1140 aa19.45■□□□□ 0.7
PRKCSH-217ENST00000592741 CCDC102BQ68D86 513 aa19.45■□□□□ 0.7
PRKCSH-217ENST00000592741 LPIN2Q92539 896 aa19.45■□□□□ 0.7
PRKCSH-217ENST00000592741 ZNF396Q96N95 335 aaPredicted RBP19.45■□□□□ 0.7
PRKCSH-217ENST00000592741 PIH1D3Q9NQM4 214 aaKnown RBP19.45■□□□□ 0.7
PRKCSH-217ENST00000592741 CCDC87Q9NVE4 849 aa19.45■□□□□ 0.7
PRKCSH-217ENST00000592741 THRAP3Q9Y2W1 955 aaKnown RBP19.45■□□□□ 0.7
PRKCSH-217ENST00000592741 TYRO3Q06418 890 aa19.45■□□□□ 0.7
PRKCSH-217ENST00000592741 A0A0G2JS52 829 aa19.44■□□□□ 0.7
PRKCSH-217ENST00000592741 DHX16O60231 1041 aaKnown RBP19.44■□□□□ 0.7
PRKCSH-217ENST00000592741 IDH1O75874 414 aaKnown RBP19.44■□□□□ 0.7
PRKCSH-217ENST00000592741 PHKA1P46020 1223 aa19.44■□□□□ 0.7
PRKCSH-217ENST00000592741 RBM43Q6ZSC3 357 aaKnown RBP19.44■□□□□ 0.7
PRKCSH-217ENST00000592741 FAM200AQ8TCP9 573 aa19.44■□□□□ 0.7
PRKCSH-217ENST00000592741 SPATA31A1Q5TZJ5 1347 aa19.44■□□□□ 0.7
PRKCSH-217ENST00000592741 SLIT2O94813 1529 aa19.44■□□□□ 0.7
PRKCSH-217ENST00000592741 NRAPQ86VF7 1730 aa19.44■□□□□ 0.7
PRKCSH-217ENST00000592741 DDX60Q8IY21 1712 aaKnown RBP19.44■□□□□ 0.7
PRKCSH-217ENST00000592741 SLC5A1P13866 664 aa19.43■□□□□ 0.7
PRKCSH-217ENST00000592741 ADD1P35611 737 aaKnown RBP19.43■□□□□ 0.7
PRKCSH-217ENST00000592741 INTS5Q6P9B9 1019 aaKnown RBP19.43■□□□□ 0.7
PRKCSH-217ENST00000592741 MRVI1Q9Y6F6 885 aa19.43■□□□□ 0.7
PRKCSH-217ENST00000592741 KLF18A0A0U1RQI7 1052 aa19.43■□□□□ 0.7
PRKCSH-217ENST00000592741 GOLGA8BA8MQT2 603 aa19.43■□□□□ 0.7
PRKCSH-217ENST00000592741 NR1I2O75469 434 aa19.43■□□□□ 0.7
PRKCSH-217ENST00000592741 FGFR2P21802 821 aa19.43■□□□□ 0.7
PRKCSH-217ENST00000592741 TRDNQ13061 729 aa19.43■□□□□ 0.7
PRKCSH-217ENST00000592741 SUSD4Q5VX71 490 aa19.43■□□□□ 0.7
PRKCSH-217ENST00000592741 UTP14AQ9BVJ6 771 aaKnown RBP19.43■□□□□ 0.7
PRKCSH-217ENST00000592741 GPHNQ9NQX3 736 aaPredicted RBP19.43■□□□□ 0.7
PRKCSH-217ENST00000592741 RCOR1Q9UKL0 485 aa19.43■□□□□ 0.7
PRKCSH-217ENST00000592741 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.43■□□□□ 0.71e-7■□□□□ 9.2
PRKCSH-217ENST00000592741 ZNF532Q9HCE3 1301 aa19.42■□□□□ 0.7
PRKCSH-217ENST00000592741 ATP6V1AP38606 617 aa19.42■□□□□ 0.7
PRKCSH-217ENST00000592741 CRKLP46109 303 aaKnown RBP19.42■□□□□ 0.7
PRKCSH-217ENST00000592741 ANTXR2P58335 489 aa19.42■□□□□ 0.7
PRKCSH-217ENST00000592741 CKAP2LQ8IYA6 745 aa19.42■□□□□ 0.7
PRKCSH-217ENST00000592741 PDE6AP16499 860 aa19.42■□□□□ 0.7
PRKCSH-217ENST00000592741 CEBPZQ03701 1054 aaKnown RBP19.42■□□□□ 0.7
PRKCSH-217ENST00000592741 PARP10Q53GL7 1025 aa19.42■□□□□ 0.7
PRKCSH-217ENST00000592741 RREB1Q92766 1687 aa19.42■□□□□ 0.7
PRKCSH-217ENST00000592741 PLCB2Q00722 1185 aa19.41■□□□□ 0.7
PRKCSH-217ENST00000592741 HELBQ8NG08 1087 aaPredicted RBP19.41■□□□□ 0.7
PRKCSH-217ENST00000592741 MPHOSPH8Q99549 860 aa19.41■□□□□ 0.7
PRKCSH-217ENST00000592741 ADAMTS2O95450 1211 aa19.4■□□□□ 0.7
PRKCSH-217ENST00000592741 FDPSP14324 419 aaKnown RBP19.4■□□□□ 0.7
PRKCSH-217ENST00000592741 GUCY1B3Q02153 619 aa19.4■□□□□ 0.7
PRKCSH-217ENST00000592741 ACSBG1Q96GR2 724 aa19.4■□□□□ 0.7
PRKCSH-217ENST00000592741 PHLPP1O60346 1717 aa19.4■□□□□ 0.7
PRKCSH-217ENST00000592741 MYO5AQ9Y4I1 1855 aaKnown RBP19.4■□□□□ 0.7
PRKCSH-217ENST00000592741 LOC102724428A0A0B4J2F2 783 aa19.4■□□□□ 0.7
PRKCSH-217ENST00000592741 PPFIA3O75145 1194 aa19.4■□□□□ 0.7
PRKCSH-217ENST00000592741 APPP05067 770 aa19.4■□□□□ 0.7
PRKCSH-217ENST00000592741 SIK1P57059 783 aa19.4■□□□□ 0.7
PRKCSH-217ENST00000592741 KIAA2012Q0VF49 1180 aa19.4■□□□□ 0.7
PRKCSH-217ENST00000592741 SASS6Q6UVJ0 657 aa19.4■□□□□ 0.7
PRKCSH-217ENST00000592741 USP28Q96RU2 1077 aa19.4■□□□□ 0.7
PRKCSH-217ENST00000592741 WWC3Q9ULE0 1092 aa19.4■□□□□ 0.7
PRKCSH-217ENST00000592741 CICQ96RK0 1608 aaPredicted RBP19.4■□□□□ 0.7
PRKCSH-217ENST00000592741 FAM177BA6PVY3 158 aa19.39■□□□□ 0.69
PRKCSH-217ENST00000592741 CPLX1O14810 134 aa19.39■□□□□ 0.69
PRKCSH-217ENST00000592741 CAMTA2O94983 1202 aa19.39■□□□□ 0.69
PRKCSH-217ENST00000592741 SPATA5Q8NB90 893 aa19.39■□□□□ 0.69
PRKCSH-217ENST00000592741 AIDAQ96BJ3 306 aa19.39■□□□□ 0.69
PRKCSH-217ENST00000592741 C8orf76Q96K31 380 aa19.39■□□□□ 0.69
PRKCSH-217ENST00000592741 HPS5Q9UPZ3 1129 aa19.39■□□□□ 0.69
PRKCSH-217ENST00000592741 TCRBV5S4A2TA0A5A2 114 aa19.39■□□□□ 0.69
PRKCSH-217ENST00000592741 TPM2P07951 284 aa19.39■□□□□ 0.69
PRKCSH-217ENST00000592741 CCDC152Q4G0S7 254 aa19.39■□□□□ 0.69
PRKCSH-217ENST00000592741 ANO6Q4KMQ2 910 aa19.39■□□□□ 0.69
PRKCSH-217ENST00000592741 CCAR1Q8IX12 1150 aaKnown RBP19.39■□□□□ 0.69
PRKCSH-217ENST00000592741 NBPF3Q9H094 633 aa19.39■□□□□ 0.69
PRKCSH-217ENST00000592741 CCDC73Q6ZRK6 1079 aa19.38■□□□□ 0.69
PRKCSH-217ENST00000592741 TBC1D10CQ8IV04 446 aa19.38■□□□□ 0.69
PRKCSH-217ENST00000592741 FTOQ9C0B1 505 aaKnown RBP eCLIP19.38■□□□□ 0.692e-6■□□□□ 11.1
PRKCSH-217ENST00000592741 ORC3Q9UBD5 711 aaPredicted RBP19.38■□□□□ 0.69
PRKCSH-217ENST00000592741 LAMB2P55268 1798 aa19.38■□□□□ 0.69
PRKCSH-217ENST00000592741 CTAGE5O15320 804 aa19.37■□□□□ 0.69
PRKCSH-217ENST00000592741 IGHMBP2P38935 993 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms