RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 CEP126Q9P2H0 1117 aa19.54■□□□□ 0.72
LIG3-215ENST00000592690 FAM205AQ6ZU69 1335 aa19.53■□□□□ 0.72
LIG3-215ENST00000592690 IFIT1P09914 478 aaKnown RBP19.53■□□□□ 0.72
LIG3-215ENST00000592690 SLC5A1P13866 664 aa19.53■□□□□ 0.72
LIG3-215ENST00000592690 BCAMP50895 628 aa19.53■□□□□ 0.72
LIG3-215ENST00000592690 ATP2B3Q16720 1220 aa19.53■□□□□ 0.72
LIG3-215ENST00000592690 CAVIN4Q5BKX8 364 aa19.53■□□□□ 0.72
LIG3-215ENST00000592690 CDC37L1Q7L3B6 337 aa19.53■□□□□ 0.72
LIG3-215ENST00000592690 USP48Q86UV5 1035 aa19.53■□□□□ 0.72
LIG3-215ENST00000592690 VPS37DQ86XT2 251 aa19.53■□□□□ 0.72
LIG3-215ENST00000592690 OGFOD1Q8N543 542 aa19.53■□□□□ 0.72
LIG3-215ENST00000592690 LPIN2Q92539 896 aa19.53■□□□□ 0.72
LIG3-215ENST00000592690 ADM5C9JUS6 153 aa19.52■□□□□ 0.72
LIG3-215ENST00000592690 F8W031 263 aaPredicted RBP19.52■□□□□ 0.72
LIG3-215ENST00000592690 FKBP1AP62942 108 aaKnown RBP19.52■□□□□ 0.72
LIG3-215ENST00000592690 NBPF9Q3BBW0 867 aa19.52■□□□□ 0.72
LIG3-215ENST00000592690 ANGEL2Q5VTE6 544 aaKnown RBP19.52■□□□□ 0.72
LIG3-215ENST00000592690 CST9Q5W186 159 aa19.52■□□□□ 0.72
LIG3-215ENST00000592690 KRT26Q7Z3Y9 468 aa19.52■□□□□ 0.72
LIG3-215ENST00000592690 DCPSQ96C86 337 aaKnown RBP19.52■□□□□ 0.72
LIG3-215ENST00000592690 MS4A1P11836 297 aa19.51■□□□□ 0.71
LIG3-215ENST00000592690 MFSD14BQ5SR56 506 aa19.51■□□□□ 0.71
LIG3-215ENST00000592690 MKRN1Q9UHC7 482 aaKnown RBP19.51■□□□□ 0.71
LIG3-215ENST00000592690 HDAC9Q9UKV0 1011 aa19.51■□□□□ 0.71
LIG3-215ENST00000592690 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.51■□□□□ 0.71
LIG3-215ENST00000592690 COL1A1P02452 1464 aaPredicted RBP19.51■□□□□ 0.71
LIG3-215ENST00000592690 CNTNAP1P78357 1384 aa19.5■□□□□ 0.71
LIG3-215ENST00000592690 WNT10BO00744 389 aa19.5■□□□□ 0.71
LIG3-215ENST00000592690 CHAF1AQ13111 956 aaPredicted RBP19.5■□□□□ 0.71
LIG3-215ENST00000592690 POLA2Q14181 598 aa19.5■□□□□ 0.71
LIG3-215ENST00000592690 COG6Q9Y2V7 657 aa19.5■□□□□ 0.71
LIG3-215ENST00000592690 PCDHAC2Q9Y5I4 1007 aa19.5■□□□□ 0.71
LIG3-215ENST00000592690 CELF2O95319 508 aaKnown RBP19.49■□□□□ 0.71
LIG3-215ENST00000592690 ATP8B2P98198 1209 aa19.49■□□□□ 0.71
LIG3-215ENST00000592690 TFCP2Q12800 502 aa19.49■□□□□ 0.71
LIG3-215ENST00000592690 MVPQ14764 893 aaKnown RBP19.49■□□□□ 0.71
LIG3-215ENST00000592690 SSH3Q8TE77 659 aa19.49■□□□□ 0.71
LIG3-215ENST00000592690 ZBED3Q96IU2 234 aaPredicted RBP19.49■□□□□ 0.71
LIG3-215ENST00000592690 ZNF408Q9H9D4 720 aa19.49■□□□□ 0.71
LIG3-215ENST00000592690 SCAF8Q9UPN6 1271 aaKnown RBP19.49■□□□□ 0.71
LIG3-215ENST00000592690 FRAT2O75474 233 aaPredicted RBP19.48■□□□□ 0.71
LIG3-215ENST00000592690 ADORA1P30542 326 aa19.48■□□□□ 0.71
LIG3-215ENST00000592690 MMP14P50281 582 aa19.48■□□□□ 0.71
LIG3-215ENST00000592690 GRIK5Q16478 980 aa19.48■□□□□ 0.71
LIG3-215ENST00000592690 C20orf194Q5TEA3 1177 aa19.48■□□□□ 0.71
LIG3-215ENST00000592690 SULF1Q8IWU6 871 aa19.48■□□□□ 0.71
LIG3-215ENST00000592690 ABT1Q9ULW3 272 aaKnown RBP19.48■□□□□ 0.71
LIG3-215ENST00000592690 PITPNM2Q9BZ72 1349 aa19.48■□□□□ 0.71
LIG3-215ENST00000592690 RASSF10A6NK89 507 aa19.46■□□□□ 0.71
LIG3-215ENST00000592690 PHKA1P46020 1223 aa19.46■□□□□ 0.71
LIG3-215ENST00000592690 TIMM10P62072 90 aa19.46■□□□□ 0.71
LIG3-215ENST00000592690 G3BP1Q13283 466 aaKnown RBP eCLIP19.46■□□□□ 0.71
LIG3-215ENST00000592690 CFAP100Q494V2 611 aa19.46■□□□□ 0.71
LIG3-215ENST00000592690 CEP85Q6P2H3 762 aa19.46■□□□□ 0.71
LIG3-215ENST00000592690 JMYQ8N9B5 988 aa19.46■□□□□ 0.71
LIG3-215ENST00000592690 TTF2Q9UNY4 1162 aaKnown RBP19.46■□□□□ 0.71
LIG3-215ENST00000592690 AOX1Q06278 1338 aa19.46■□□□□ 0.71
LIG3-215ENST00000592690 THSD7BQ9C0I4 1608 aa19.45■□□□□ 0.7
LIG3-215ENST00000592690 A0A1B0GUL7 405 aa19.45■□□□□ 0.7
LIG3-215ENST00000592690 DLGAP5Q15398 846 aa19.45■□□□□ 0.7
LIG3-215ENST00000592690 MTMR14Q8NCE2 650 aa19.45■□□□□ 0.7
LIG3-215ENST00000592690 CDCA5Q96FF9 252 aa19.45■□□□□ 0.7
LIG3-215ENST00000592690 DDX19BQ9UMR2 479 aa19.45■□□□□ 0.7
LIG3-215ENST00000592690 TLL2Q9Y6L7 1015 aa19.45■□□□□ 0.7
LIG3-215ENST00000592690 DEFB115Q30KQ5 88 aa19.44■□□□□ 0.7
LIG3-215ENST00000592690 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.44■□□□□ 0.7
LIG3-215ENST00000592690 TBC1D22AQ8WUA7 517 aa19.44■□□□□ 0.7
LIG3-215ENST00000592690 AKAP2Q9Y2D5 859 aa19.44■□□□□ 0.7
LIG3-215ENST00000592690 MYH2Q9UKX2 1941 aa19.43■□□□□ 0.7
LIG3-215ENST00000592690 PAPPA2Q9BXP8 1791 aa19.43■□□□□ 0.7
LIG3-215ENST00000592690 SPDYE2BA6NHP3 402 aa19.43■□□□□ 0.7
LIG3-215ENST00000592690 SURF6O75683 361 aaKnown RBP19.43■□□□□ 0.7
LIG3-215ENST00000592690 SPDYE6P0CI01 402 aa19.43■□□□□ 0.7
LIG3-215ENST00000592690 VEGFBP49765 207 aa19.43■□□□□ 0.7
LIG3-215ENST00000592690 PDE3AQ14432 1141 aa19.43■□□□□ 0.7
LIG3-215ENST00000592690 CCDC102BQ68D86 513 aa19.43■□□□□ 0.7
LIG3-215ENST00000592690 XAGE2Q96GT9 111 aa19.43■□□□□ 0.7
LIG3-215ENST00000592690 PRMT6Q96LA8 375 aaPredicted RBP19.43■□□□□ 0.7
LIG3-215ENST00000592690 ZBTB40Q9NUA8 1239 aa19.43■□□□□ 0.7
LIG3-215ENST00000592690 RBM5P52756 815 aaKnown RBP eCLIP19.42■□□□□ 0.7
LIG3-215ENST00000592690 OS9Q13438 667 aaPredicted RBP19.42■□□□□ 0.7
LIG3-215ENST00000592690 PRAMEF18Q5VWM3 479 aa19.42■□□□□ 0.7
LIG3-215ENST00000592690 SAPCD2Q86UD0 394 aa19.42■□□□□ 0.7
LIG3-215ENST00000592690 NEUROD6Q96NK8 337 aa19.42■□□□□ 0.7
LIG3-215ENST00000592690 GNL3LQ9NVN8 582 aaKnown RBP19.42■□□□□ 0.7
LIG3-215ENST00000592690 AKAP11Q9UKA4 1901 aa19.42■□□□□ 0.7
LIG3-215ENST00000592690 PCNTO95613 3336 aa19.41■□□□□ 0.7
LIG3-215ENST00000592690 MYO5AQ9Y4I1 1855 aaKnown RBP19.41■□□□□ 0.7
LIG3-215ENST00000592690 CLRN2A0PK11 232 aa19.41■□□□□ 0.7
LIG3-215ENST00000592690 CRKP46108 304 aa19.41■□□□□ 0.7
LIG3-215ENST00000592690 APOBEC3FQ8IUX4 373 aaKnown RBP19.41■□□□□ 0.7
LIG3-215ENST00000592690 WDR66Q8TBY9 1149 aa19.41■□□□□ 0.7
LIG3-215ENST00000592690 GBA2Q9HCG7 927 aaPredicted RBP19.41■□□□□ 0.7
LIG3-215ENST00000592690 SERPINA10Q9UK55 444 aa19.41■□□□□ 0.7
LIG3-215ENST00000592690 NOP58Q9Y2X3 529 aaKnown RBP19.41■□□□□ 0.7
LIG3-215ENST00000592690 CYP4F22Q6NT55 531 aa19.4■□□□□ 0.7
LIG3-215ENST00000592690 PAXIP1Q6ZW49 1069 aaPredicted RBP19.4■□□□□ 0.7
LIG3-215ENST00000592690 DENND2AQ9ULE3 1009 aa19.4■□□□□ 0.7
LIG3-215ENST00000592690 SEMA3EO15041 775 aa19.39■□□□□ 0.69
LIG3-215ENST00000592690 RASGRF1Q13972 1273 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms