RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 PDIA3P30101 505 aaKnown RBP23.27■■□□□ 1.32
MBD3-209ENST00000592012 TPRNQ4KMQ1 711 aa23.27■■□□□ 1.32
MBD3-209ENST00000592012 TTC6Q86TZ1 520 aa23.27■■□□□ 1.32
MBD3-209ENST00000592012 TRIM44Q96DX7 344 aaPredicted RBP23.27■■□□□ 1.32
MBD3-209ENST00000592012 COL5A3P25940 1745 aaPredicted RBP23.26■■□□□ 1.31
MBD3-209ENST00000592012 EVCP57679 992 aa23.26■■□□□ 1.31
MBD3-209ENST00000592012 CLEC4GQ6UXB4 293 aa23.26■■□□□ 1.31
MBD3-209ENST00000592012 ATRNO75882 1429 aa23.26■■□□□ 1.31
MBD3-209ENST00000592012 ELP1O95163 1332 aa23.26■■□□□ 1.31
MBD3-209ENST00000592012 ARAP2Q8WZ64 1704 aa23.26■■□□□ 1.31
MBD3-209ENST00000592012 VPS72Q15906 364 aa23.26■■□□□ 1.31
MBD3-209ENST00000592012 ZNF652Q9Y2D9 606 aa23.26■■□□□ 1.31
MBD3-209ENST00000592012 BCL9LQ86UU0 1499 aa23.25■■□□□ 1.31
MBD3-209ENST00000592012 CCT2P78371 535 aaKnown RBP23.25■■□□□ 1.31
MBD3-209ENST00000592012 LINC00116Q8NCU8 138 aa23.25■■□□□ 1.31
MBD3-209ENST00000592012 NGLY1Q96IV0 654 aa23.25■■□□□ 1.31
MBD3-209ENST00000592012 ZNF532Q9HCE3 1301 aa23.25■■□□□ 1.31
MBD3-209ENST00000592012 TCRBV5S4A2TA0A5A2 114 aa23.25■■□□□ 1.31
MBD3-209ENST00000592012 ZNF213O14771 459 aa23.25■■□□□ 1.31
MBD3-209ENST00000592012 PDE6AP16499 860 aa23.25■■□□□ 1.31
MBD3-209ENST00000592012 FAM184AQ8NB25 1140 aa23.25■■□□□ 1.31
MBD3-209ENST00000592012 SPATA5Q8NB90 893 aa23.25■■□□□ 1.31
MBD3-209ENST00000592012 C8orf37Q96NL8 207 aa23.25■■□□□ 1.31
MBD3-209ENST00000592012 LETM1O95202 739 aaPredicted RBP23.24■■□□□ 1.31
MBD3-209ENST00000592012 IGHMBP2P38935 993 aaKnown RBP23.24■■□□□ 1.31
MBD3-209ENST00000592012 MB21D2Q8IYB1 491 aaPredicted RBP23.24■■□□□ 1.31
MBD3-209ENST00000592012 WWC3Q9ULE0 1092 aa23.24■■□□□ 1.31
MBD3-209ENST00000592012 HMGN5P82970 282 aaKnown RBP23.23■■□□□ 1.31
MBD3-209ENST00000592012 SCAND2PQ9GZW5 306 aaPredicted RBP23.23■■□□□ 1.31
MBD3-209ENST00000592012 ZNF831Q5JPB2 1677 aa23.23■■□□□ 1.31
MBD3-209ENST00000592012 PTPDC1A2A3K4 754 aa23.23■■□□□ 1.31
MBD3-209ENST00000592012 H3BQV1 296 aa23.23■■□□□ 1.31
MBD3-209ENST00000592012 RASGRF1Q13972 1273 aa23.23■■□□□ 1.31
MBD3-209ENST00000592012 IFFO2Q5TF58 517 aa23.23■■□□□ 1.31
MBD3-209ENST00000592012 NCOA5Q9HCD5 579 aaKnown RBP23.23■■□□□ 1.31
MBD3-209ENST00000592012 GPHNQ9NQX3 736 aaPredicted RBP23.23■■□□□ 1.31
MBD3-209ENST00000592012 SALL1Q9NSC2 1324 aa23.23■■□□□ 1.31
MBD3-209ENST00000592012 MCM5P33992 734 aa23.22■■□□□ 1.31
MBD3-209ENST00000592012 RESTQ13127 1097 aa23.22■■□□□ 1.31
MBD3-209ENST00000592012 RNF214Q8ND24 703 aa23.22■■□□□ 1.31
MBD3-209ENST00000592012 NCOA7Q8NI08 942 aa23.22■■□□□ 1.31
MBD3-209ENST00000592012 PDLIM2Q96JY6 352 aa23.22■■□□□ 1.31
MBD3-209ENST00000592012 TFIP11Q9UBB9 837 aaKnown RBP23.22■■□□□ 1.31
MBD3-209ENST00000592012 LAMB2P55268 1798 aa23.22■■□□□ 1.31
MBD3-209ENST00000592012 KCNQ4P56696 695 aa23.21■■□□□ 1.31
MBD3-209ENST00000592012 NBPF3Q9H094 633 aa23.21■■□□□ 1.31
MBD3-209ENST00000592012 ZSCAN16Q9H4T2 348 aaPredicted RBP23.21■■□□□ 1.31
MBD3-209ENST00000592012 NAP1L2Q9ULW6 460 aaPredicted RBP23.21■■□□□ 1.31
MBD3-209ENST00000592012 BCORQ6W2J9 1755 aa23.21■■□□□ 1.31
MBD3-209ENST00000592012 PRC1O43663 620 aa23.21■■□□□ 1.31
MBD3-209ENST00000592012 ESPNB1AK53 854 aa23.2■■□□□ 1.3
MBD3-209ENST00000592012 ANTXR2P58335 489 aa23.2■■□□□ 1.3
MBD3-209ENST00000592012 NAA16Q6N069 864 aaPredicted RBP23.2■■□□□ 1.3
MBD3-209ENST00000592012 PTF1AQ7RTS3 328 aa23.2■■□□□ 1.3
MBD3-209ENST00000592012 CHMP4CQ96CF2 233 aa23.2■■□□□ 1.3
MBD3-209ENST00000592012 STRBPQ96SI9 672 aaKnown RBP23.2■■□□□ 1.3
MBD3-209ENST00000592012 CHRNDQ07001 517 aa23.2■■□□□ 1.3
MBD3-209ENST00000592012 KLHL34Q8N239 644 aa23.2■■□□□ 1.3
MBD3-209ENST00000592012 SPATA32Q96LK8 384 aa23.2■■□□□ 1.3
MBD3-209ENST00000592012 UBAP1LF5GYI3 381 aa23.19■■□□□ 1.3
MBD3-209ENST00000592012 BCAMP50895 628 aa23.19■■□□□ 1.3
MBD3-209ENST00000592012 RALYLQ86SE5 291 aaKnown RBP23.19■■□□□ 1.3
MBD3-209ENST00000592012 FNBP4Q8N3X1 1017 aaPredicted RBP23.19■■□□□ 1.3
MBD3-209ENST00000592012 LEO1Q8WVC0 666 aaPredicted RBP23.19■■□□□ 1.3
MBD3-209ENST00000592012 KIF3AQ9Y496 699 aa23.19■■□□□ 1.3
MBD3-209ENST00000592012 ERFEQ4G0M1 354 aa23.19■■□□□ 1.3
MBD3-209ENST00000592012 WDR19Q8NEZ3 1342 aa23.18■■□□□ 1.3
MBD3-209ENST00000592012 APPP05067 770 aa23.18■■□□□ 1.3
MBD3-209ENST00000592012 MAP3K12Q12852 859 aa23.18■■□□□ 1.3
MBD3-209ENST00000592012 AIDAQ96BJ3 306 aa23.18■■□□□ 1.3
MBD3-209ENST00000592012 CNTNAP4Q9C0A0 1308 aa23.18■■□□□ 1.3
MBD3-209ENST00000592012 MAGEB6Q8N7X4 407 aa23.18■■□□□ 1.3
MBD3-209ENST00000592012 CERKQ8TCT0 537 aa23.18■■□□□ 1.3
MBD3-209ENST00000592012 CDC5LQ99459 802 aaKnown RBP23.18■■□□□ 1.3
MBD3-209ENST00000592012 DOCK2Q92608 1830 aa23.17■■□□□ 1.3
MBD3-209ENST00000592012 SF3B3Q15393 1217 aaKnown RBP23.17■■□□□ 1.3
MBD3-209ENST00000592012 COL4A1P02462 1669 aa23.17■■□□□ 1.3
MBD3-209ENST00000592012 CLCN1P35523 988 aa23.16■■□□□ 1.3
MBD3-209ENST00000592012 C3orf67Q6ZVT6 689 aa23.16■■□□□ 1.3
MBD3-209ENST00000592012 TBC1D10CQ8IV04 446 aa23.16■■□□□ 1.3
MBD3-209ENST00000592012 HPS5Q9UPZ3 1129 aa23.16■■□□□ 1.3
MBD3-209ENST00000592012 FDPSP14324 419 aaKnown RBP23.16■■□□□ 1.3
MBD3-209ENST00000592012 TRDNQ13061 729 aa23.16■■□□□ 1.3
MBD3-209ENST00000592012 ALX1Q15699 326 aa23.16■■□□□ 1.3
MBD3-209ENST00000592012 GIMAP6Q6P9H5 292 aa23.16■■□□□ 1.3
MBD3-209ENST00000592012 FUCA2Q9BTY2 467 aa23.16■■□□□ 1.3
MBD3-209ENST00000592012 DENND2AQ9ULE3 1009 aa23.16■■□□□ 1.3
MBD3-209ENST00000592012 RGL2O15211 777 aa23.15■■□□□ 1.3
MBD3-209ENST00000592012 PPFIA3O75145 1194 aa23.15■■□□□ 1.3
MBD3-209ENST00000592012 KLF18A0A0U1RQI7 1052 aa23.15■■□□□ 1.3
MBD3-209ENST00000592012 PATL2C9JE40 543 aaKnown RBP23.15■■□□□ 1.3
MBD3-209ENST00000592012 LIG1P18858 919 aa23.15■■□□□ 1.3
MBD3-209ENST00000592012 ADD1P35611 737 aaKnown RBP23.15■■□□□ 1.3
MBD3-209ENST00000592012 SMIM5Q71RC9 77 aa23.15■■□□□ 1.3
MBD3-209ENST00000592012 NKX2-3Q8TAU0 364 aa23.15■■□□□ 1.3
MBD3-209ENST00000592012 BCL2L12Q9HB09 334 aa23.15■■□□□ 1.3
MBD3-209ENST00000592012 CFAP45Q9UL16 551 aa23.14■■□□□ 1.3
MBD3-209ENST00000592012 CARMIL3Q8ND23 1372 aa23.14■■□□□ 1.3
MBD3-209ENST00000592012 RC3H1Q5TC82 1133 aaKnown RBP23.14■■□□□ 1.29
MBD3-209ENST00000592012 GOLGA6L4A6NEF3 574 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 325.2 ms