RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 CRB1P82279 1406 aa10.51□□□□□ -0.73
VMP1-213ENST00000591877 LILRA1O75019 489 aa10.51□□□□□ -0.73
VMP1-213ENST00000591877 DBN1Q16643 649 aa10.51□□□□□ -0.73
VMP1-213ENST00000591877 RIPOR1Q6ZS17 1223 aa10.51□□□□□ -0.73
VMP1-213ENST00000591877 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.51□□□□□ -0.73
VMP1-213ENST00000591877 TRIM22Q8IYM9 498 aa10.51□□□□□ -0.73
VMP1-213ENST00000591877 TCP11L2Q8N4U5 519 aa10.51□□□□□ -0.73
VMP1-213ENST00000591877 TMC1Q8TDI8 760 aa10.51□□□□□ -0.73
VMP1-213ENST00000591877 A0A1W2PP64 1363 aa10.51□□□□□ -0.73
VMP1-213ENST00000591877 LRRC37A3O60309 1634 aa10.51□□□□□ -0.73
VMP1-213ENST00000591877 BAG6P46379 1132 aa10.5□□□□□ -0.73
VMP1-213ENST00000591877 FOXR1Q6PIV2 292 aa10.5□□□□□ -0.73
VMP1-213ENST00000591877 NME9Q86XW9 330 aa10.5□□□□□ -0.73
VMP1-213ENST00000591877 SIX5Q8N196 739 aa10.5□□□□□ -0.73
VMP1-213ENST00000591877 KCNH5Q8NCM2 988 aa10.5□□□□□ -0.73
VMP1-213ENST00000591877 DNAAF2Q9NVR5 837 aaKnown RBP10.5□□□□□ -0.73
VMP1-213ENST00000591877 DOLKQ9UPQ8 538 aa10.5□□□□□ -0.73
VMP1-213ENST00000591877 PEAK1Q9H792 1746 aa10.5□□□□□ -0.73
VMP1-213ENST00000591877 EDC4Q6P2E9 1401 aaKnown RBP10.5□□□□□ -0.73
VMP1-213ENST00000591877 SBF2Q86WG5 1849 aa10.49□□□□□ -0.73
VMP1-213ENST00000591877 ERVH48-1M5A8F1 160 aa10.49□□□□□ -0.73
VMP1-213ENST00000591877 ERCC3P19447 782 aa10.49□□□□□ -0.73
VMP1-213ENST00000591877 SF3B2Q13435 895 aaKnown RBP10.49□□□□□ -0.73
VMP1-213ENST00000591877 THRAP3Q9Y2W1 955 aaKnown RBP10.49□□□□□ -0.73
VMP1-213ENST00000591877 ATP2B4P23634 1241 aa10.48□□□□□ -0.73
VMP1-213ENST00000591877 RBM25P49756 843 aaKnown RBP10.48□□□□□ -0.73
VMP1-213ENST00000591877 CLDN10P78369 228 aa10.48□□□□□ -0.73
VMP1-213ENST00000591877 DPYDQ12882 1025 aa10.48□□□□□ -0.73
VMP1-213ENST00000591877 HDGFL2Q7Z4V5 671 aaPredicted RBP10.48□□□□□ -0.73
VMP1-213ENST00000591877 GTPBP3Q969Y2 492 aaKnown RBP10.48□□□□□ -0.73
VMP1-213ENST00000591877 PCGF6Q9BYE7 350 aa10.48□□□□□ -0.73
VMP1-213ENST00000591877 WDR17Q8IZU2 1322 aa10.48□□□□□ -0.73
VMP1-213ENST00000591877 USP47Q96K76 1375 aa10.48□□□□□ -0.73
VMP1-213ENST00000591877 OVOS2A0A0J9YW53 1432 aa10.48□□□□□ -0.73
VMP1-213ENST00000591877 DISP2A7MBM2 1401 aa10.48□□□□□ -0.73
VMP1-213ENST00000591877 OVOS2Q6IE36 1432 aa10.48□□□□□ -0.73
VMP1-213ENST00000591877 ABCC6O95255 1503 aa10.48□□□□□ -0.73
VMP1-213ENST00000591877 TRIM37O94972 964 aa10.47□□□□□ -0.73
VMP1-213ENST00000591877 FURINP09958 794 aa10.47□□□□□ -0.73
VMP1-213ENST00000591877 PDE3BQ13370 1112 aa10.47□□□□□ -0.73
VMP1-213ENST00000591877 NBPF20Q3BBV1 942 aa10.47□□□□□ -0.73
VMP1-213ENST00000591877 FAM196AQ6ZSG2 479 aa10.47□□□□□ -0.73
VMP1-213ENST00000591877 TOM1L2Q6ZVM7 507 aa10.47□□□□□ -0.73
VMP1-213ENST00000591877 GMCL1Q96IK5 515 aa10.47□□□□□ -0.73
VMP1-213ENST00000591877 PSMG3-AS1Q96PY0 264 aa10.47□□□□□ -0.73
VMP1-213ENST00000591877 KRBA1A5PL33 1030 aa10.46□□□□□ -0.73
VMP1-213ENST00000591877 RNF144AP50876 292 aaPredicted RBP10.46□□□□□ -0.73
VMP1-213ENST00000591877 CCDC85AQ96PX6 553 aaPredicted RBP10.46□□□□□ -0.73
VMP1-213ENST00000591877 TERF2IPQ9NYB0 399 aa10.46□□□□□ -0.73
VMP1-213ENST00000591877 CLSPNQ9HAW4 1339 aa10.46□□□□□ -0.73
VMP1-213ENST00000591877 MYOM1P52179 1685 aa10.46□□□□□ -0.74
VMP1-213ENST00000591877 RREB1Q92766 1687 aa10.46□□□□□ -0.74
VMP1-213ENST00000591877 NINLQ9Y2I6 1382 aa10.45□□□□□ -0.74
VMP1-213ENST00000591877 E9PSI1 815 aa10.45□□□□□ -0.74
VMP1-213ENST00000591877 DKK1O94907 266 aa10.45□□□□□ -0.74
VMP1-213ENST00000591877 SNRPNP63162 240 aaKnown RBP10.45□□□□□ -0.74
VMP1-213ENST00000591877 EZH2Q15910 746 aaKnown RBP10.45□□□□□ -0.74
VMP1-213ENST00000591877 ZNF594Q96JF6 807 aaPredicted RBP10.45□□□□□ -0.74
VMP1-213ENST00000591877 CAMKK2Q96RR4 588 aa10.45□□□□□ -0.74
VMP1-213ENST00000591877 GAS2L1Q99501 681 aaPredicted RBP10.45□□□□□ -0.74
VMP1-213ENST00000591877 CARD10Q9BWT7 1032 aa10.45□□□□□ -0.74
VMP1-213ENST00000591877 RBM19Q9Y4C8 960 aaKnown RBP10.45□□□□□ -0.74
VMP1-213ENST00000591877 NUP188Q5SRE5 1749 aa10.44□□□□□ -0.74
VMP1-213ENST00000591877 SRCAPQ6ZRS2 3230 aa10.44□□□□□ -0.74
VMP1-213ENST00000591877 SOWAHDA6NJG2 315 aa10.44□□□□□ -0.74
VMP1-213ENST00000591877 SEC13P55735 322 aa10.44□□□□□ -0.74
VMP1-213ENST00000591877 GTF2IP78347 998 aa10.44□□□□□ -0.74
VMP1-213ENST00000591877 CYLDQ9NQC7 956 aa10.44□□□□□ -0.74
VMP1-213ENST00000591877 ANKRD36BQ8N2N9 1353 aa10.43□□□□□ -0.74
VMP1-213ENST00000591877 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.43□□□□□ -0.74
VMP1-213ENST00000591877 ESPNB1AK53 854 aa10.43□□□□□ -0.74
VMP1-213ENST00000591877 GIGYF1O75420 1035 aaPredicted RBP10.43□□□□□ -0.74
VMP1-213ENST00000591877 APBA3O96018 575 aa10.43□□□□□ -0.74
VMP1-213ENST00000591877 MX2P20592 715 aa10.43□□□□□ -0.74
VMP1-213ENST00000591877 FBLN1P23142 703 aa10.43□□□□□ -0.74
VMP1-213ENST00000591877 TMF1P82094 1093 aa10.43□□□□□ -0.74
VMP1-213ENST00000591877 TRERF1Q96PN7 1200 aa10.43□□□□□ -0.74
VMP1-213ENST00000591877 RGPD2P0DJD1 1756 aa10.43□□□□□ -0.74
VMP1-213ENST00000591877 OVOS2A0A0G2JMS6 1433 aa10.42□□□□□ -0.74
VMP1-213ENST00000591877 KIF20BQ96Q89 1820 aa10.42□□□□□ -0.74
VMP1-213ENST00000591877 ZBTB7BO15156 539 aaPredicted RBP10.42□□□□□ -0.74
VMP1-213ENST00000591877 OIP5O43482 229 aa10.42□□□□□ -0.74
VMP1-213ENST00000591877 USP4Q13107 963 aa10.42□□□□□ -0.74
VMP1-213ENST00000591877 DDB1Q16531 1140 aa10.42□□□□□ -0.74
VMP1-213ENST00000591877 TSGA10IPQ3SY00 556 aa10.42□□□□□ -0.74
VMP1-213ENST00000591877 PTF1AQ7RTS3 328 aa10.42□□□□□ -0.74
VMP1-213ENST00000591877 MARCH10Q8NA82 808 aaPredicted RBP10.42□□□□□ -0.74
VMP1-213ENST00000591877 KRTAP9-2Q9BYQ4 174 aa10.42□□□□□ -0.74
VMP1-213ENST00000591877 CCDC7Q96M83 1385 aa10.41□□□□□ -0.74
VMP1-213ENST00000591877 LRP5O75197 1615 aa10.41□□□□□ -0.74
VMP1-213ENST00000591877 MEN1O00255 615 aa10.41□□□□□ -0.74
VMP1-213ENST00000591877 OXLD1Q5BKU9 147 aa10.41□□□□□ -0.74
VMP1-213ENST00000591877 ZNF428Q96B54 188 aa10.41□□□□□ -0.74
VMP1-213ENST00000591877 EGFL7Q9UHF1 273 aa10.41□□□□□ -0.74
VMP1-213ENST00000591877 RGPD3A6NKT7 1758 aaPredicted RBP10.41□□□□□ -0.74
VMP1-213ENST00000591877 RGPD4Q7Z3J3 1758 aa10.41□□□□□ -0.74
VMP1-213ENST00000591877 FAM208AQ9UK61 1670 aaKnown RBP10.41□□□□□ -0.74
VMP1-213ENST00000591877 H7C1W4 665 aa10.4□□□□□ -0.74
VMP1-213ENST00000591877 FYB1O15117 783 aa10.4□□□□□ -0.74
VMP1-213ENST00000591877 CCDC102BQ68D86 513 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms