RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 FGFR2P21802 821 aa17.41■□□□□ 0.38
SCAMP4-212ENST00000590266 TFCP2Q12800 502 aa17.41■□□□□ 0.38
SCAMP4-212ENST00000590266 OS9Q13438 667 aaPredicted RBP17.41■□□□□ 0.38
SCAMP4-212ENST00000590266 SCARF1Q14162 830 aa17.41■□□□□ 0.38
SCAMP4-212ENST00000590266 C20orf194Q5TEA3 1177 aa17.41■□□□□ 0.38
SCAMP4-212ENST00000590266 CERS5Q8N5B7 392 aa17.41■□□□□ 0.38
SCAMP4-212ENST00000590266 TDRD7Q8NHU6 1098 aaKnown RBP17.41■□□□□ 0.38
SCAMP4-212ENST00000590266 DCPSQ96C86 337 aaKnown RBP17.41■□□□□ 0.38
SCAMP4-212ENST00000590266 ZNF408Q9H9D4 720 aa17.41■□□□□ 0.38
SCAMP4-212ENST00000590266 GGA3Q9NZ52 723 aa17.41■□□□□ 0.38
SCAMP4-212ENST00000590266 HDAC9Q9UKV0 1011 aa17.41■□□□□ 0.38
SCAMP4-212ENST00000590266 SASH1O94885 1247 aa17.4■□□□□ 0.38
SCAMP4-212ENST00000590266 HSPA1AP0DMV8 641 aaKnown RBP17.4■□□□□ 0.38
SCAMP4-212ENST00000590266 HSPA1BP0DMV9 641 aaKnown RBP17.4■□□□□ 0.38
SCAMP4-212ENST00000590266 G3BP1Q13283 466 aaKnown RBP eCLIP17.4■□□□□ 0.38
SCAMP4-212ENST00000590266 FBXO33Q7Z6M2 555 aa17.4■□□□□ 0.38
SCAMP4-212ENST00000590266 USP48Q86UV5 1035 aa17.4■□□□□ 0.38
SCAMP4-212ENST00000590266 ZC3H15Q8WU90 426 aaKnown RBP17.4■□□□□ 0.38
SCAMP4-212ENST00000590266 ZNF609O15014 1411 aa17.39■□□□□ 0.38
SCAMP4-212ENST00000590266 A0A1B0GUL6 1792 aa17.39■□□□□ 0.37
SCAMP4-212ENST00000590266 ATP8B2P98198 1209 aa17.39■□□□□ 0.37
SCAMP4-212ENST00000590266 MFSD14BQ5SR56 506 aa17.39■□□□□ 0.37
SCAMP4-212ENST00000590266 ANGEL2Q5VTE6 544 aaKnown RBP17.39■□□□□ 0.37
SCAMP4-212ENST00000590266 DLK2Q6UY11 383 aa17.39■□□□□ 0.37
SCAMP4-212ENST00000590266 KRT26Q7Z3Y9 468 aa17.39■□□□□ 0.37
SCAMP4-212ENST00000590266 DDX19BQ9UMR2 479 aa17.39■□□□□ 0.37
SCAMP4-212ENST00000590266 ADM5C9JUS6 153 aa17.38■□□□□ 0.37
SCAMP4-212ENST00000590266 RBM5P52756 815 aaKnown RBP eCLIP17.38■□□□□ 0.37
SCAMP4-212ENST00000590266 POLA2Q14181 598 aa17.38■□□□□ 0.37
SCAMP4-212ENST00000590266 NBPF9Q3BBW0 867 aa17.38■□□□□ 0.37
SCAMP4-212ENST00000590266 CDC37L1Q7L3B6 337 aa17.38■□□□□ 0.37
SCAMP4-212ENST00000590266 PGAP2Q9UHJ9 254 aa17.38■□□□□ 0.37
SCAMP4-212ENST00000590266 ABT1Q9ULW3 272 aaKnown RBP17.38■□□□□ 0.37
SCAMP4-212ENST00000590266 SCAF8Q9UPN6 1271 aaKnown RBP17.38■□□□□ 0.37
SCAMP4-212ENST00000590266 SURF6O75683 361 aaKnown RBP17.37■□□□□ 0.37
SCAMP4-212ENST00000590266 ADORA1P30542 326 aa17.37■□□□□ 0.37
SCAMP4-212ENST00000590266 TIMM10P62072 90 aa17.37■□□□□ 0.37
SCAMP4-212ENST00000590266 CEP85Q6P2H3 762 aa17.37■□□□□ 0.37
SCAMP4-212ENST00000590266 SULF1Q8IWU6 871 aa17.37■□□□□ 0.37
SCAMP4-212ENST00000590266 NEUROD6Q96NK8 337 aa17.37■□□□□ 0.37
SCAMP4-212ENST00000590266 FAM205AQ6ZU69 1335 aa17.37■□□□□ 0.37
SCAMP4-212ENST00000590266 A0A1B0GUL7 405 aa17.36■□□□□ 0.37
SCAMP4-212ENST00000590266 CELF2O95319 508 aaKnown RBP17.36■□□□□ 0.37
SCAMP4-212ENST00000590266 DLGAP5Q15398 846 aa17.36■□□□□ 0.37
SCAMP4-212ENST00000590266 COL13A1Q5TAT6 717 aaPredicted RBP17.36■□□□□ 0.37
SCAMP4-212ENST00000590266 SSH3Q8TE77 659 aa17.36■□□□□ 0.37
SCAMP4-212ENST00000590266 AKAP2Q9Y2D5 859 aa17.36■□□□□ 0.37
SCAMP4-212ENST00000590266 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.36■□□□□ 0.37
SCAMP4-212ENST00000590266 WNT10BO00744 389 aa17.35■□□□□ 0.37
SCAMP4-212ENST00000590266 PHKA1P46020 1223 aa17.35■□□□□ 0.37
SCAMP4-212ENST00000590266 FKBP1AP62942 108 aaKnown RBP17.35■□□□□ 0.37
SCAMP4-212ENST00000590266 PDE3AQ14432 1141 aa17.35■□□□□ 0.37
SCAMP4-212ENST00000590266 TNS4Q8IZW8 715 aa17.35■□□□□ 0.37
SCAMP4-212ENST00000590266 AIDAQ96BJ3 306 aa17.35■□□□□ 0.37
SCAMP4-212ENST00000590266 GNL3LQ9NVN8 582 aaKnown RBP17.35■□□□□ 0.37
SCAMP4-212ENST00000590266 TTF2Q9UNY4 1162 aaKnown RBP17.35■□□□□ 0.37
SCAMP4-212ENST00000590266 PCDHAC2Q9Y5I4 1007 aa17.35■□□□□ 0.37
SCAMP4-212ENST00000590266 CNTNAP1P78357 1384 aa17.35■□□□□ 0.37
SCAMP4-212ENST00000590266 GRIK5Q16478 980 aa17.34■□□□□ 0.37
SCAMP4-212ENST00000590266 CFAP100Q494V2 611 aa17.34■□□□□ 0.37
SCAMP4-212ENST00000590266 GORABQ5T7V8 394 aa17.34■□□□□ 0.37
SCAMP4-212ENST00000590266 PAXIP1Q6ZW49 1069 aaPredicted RBP17.34■□□□□ 0.37
SCAMP4-212ENST00000590266 BCL11AQ9H165 835 aa17.34■□□□□ 0.37
SCAMP4-212ENST00000590266 CHMP4BQ9H444 224 aaKnown RBP17.34■□□□□ 0.37
SCAMP4-212ENST00000590266 GRM1Q13255 1194 aa17.33■□□□□ 0.36
SCAMP4-212ENST00000590266 CST9Q5W186 159 aa17.33■□□□□ 0.36
SCAMP4-212ENST00000590266 CCDC102BQ68D86 513 aa17.33■□□□□ 0.36
SCAMP4-212ENST00000590266 TBC1D22AQ8WUA7 517 aa17.33■□□□□ 0.36
SCAMP4-212ENST00000590266 XAGE2Q96GT9 111 aa17.33■□□□□ 0.36
SCAMP4-212ENST00000590266 ZBTB40Q9NUA8 1239 aa17.33■□□□□ 0.36
SCAMP4-212ENST00000590266 CLRN2A0PK11 232 aa17.32■□□□□ 0.36
SCAMP4-212ENST00000590266 VEGFBP49765 207 aa17.32■□□□□ 0.36
SCAMP4-212ENST00000590266 MMP14P50281 582 aa17.32■□□□□ 0.36
SCAMP4-212ENST00000590266 RRP1P56182 461 aaKnown RBP17.32■□□□□ 0.36
SCAMP4-212ENST00000590266 DEFB115Q30KQ5 88 aa17.32■□□□□ 0.36
SCAMP4-212ENST00000590266 EXOC6BQ9Y2D4 811 aa17.32■□□□□ 0.36
SCAMP4-212ENST00000590266 APBB1O00213 710 aa17.31■□□□□ 0.36
SCAMP4-212ENST00000590266 MYO1BO43795 1136 aa17.31■□□□□ 0.36
SCAMP4-212ENST00000590266 PRAMEF18Q5VWM3 479 aa17.31■□□□□ 0.36
SCAMP4-212ENST00000590266 CDCA5Q96FF9 252 aa17.31■□□□□ 0.36
SCAMP4-212ENST00000590266 VEZTQ9HBM0 779 aa17.31■□□□□ 0.36
SCAMP4-212ENST00000590266 COL1A1P02452 1464 aaPredicted RBP17.31■□□□□ 0.36
SCAMP4-212ENST00000590266 PSME4Q14997 1843 aa17.31■□□□□ 0.36
SCAMP4-212ENST00000590266 PITPNM2Q9BZ72 1349 aa17.3■□□□□ 0.36
SCAMP4-212ENST00000590266 SPDYE2BA6NHP3 402 aa17.3■□□□□ 0.36
SCAMP4-212ENST00000590266 SPDYE6P0CI01 402 aa17.3■□□□□ 0.36
SCAMP4-212ENST00000590266 WDR66Q8TBY9 1149 aa17.3■□□□□ 0.36
SCAMP4-212ENST00000590266 DENND2AQ9ULE3 1009 aa17.3■□□□□ 0.36
SCAMP4-212ENST00000590266 ZNF646O15015 1829 aaPredicted RBP17.29■□□□□ 0.36
SCAMP4-212ENST00000590266 RASSF10A6NK89 507 aa17.29■□□□□ 0.36
SCAMP4-212ENST00000590266 HMMRO75330 724 aa17.29■□□□□ 0.36
SCAMP4-212ENST00000590266 CAPN15O75808 1086 aa17.29■□□□□ 0.36
SCAMP4-212ENST00000590266 CRKP46108 304 aa17.29■□□□□ 0.36
SCAMP4-212ENST00000590266 RASGRF1Q13972 1273 aa17.29■□□□□ 0.36
SCAMP4-212ENST00000590266 TNNI3KQ59H18 835 aa17.29■□□□□ 0.36
SCAMP4-212ENST00000590266 RPAP2Q8IXW5 612 aaPredicted RBP17.29■□□□□ 0.36
SCAMP4-212ENST00000590266 ZBED3Q96IU2 234 aaPredicted RBP17.29■□□□□ 0.36
SCAMP4-212ENST00000590266 PRMT6Q96LA8 375 aaPredicted RBP17.29■□□□□ 0.36
SCAMP4-212ENST00000590266 SERPINA10Q9UK55 444 aa17.29■□□□□ 0.36
SCAMP4-212ENST00000590266 NOP58Q9Y2X3 529 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms