RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 BCAMP50895 628 aa22.72■■□□□ 1.23
DDX39A-212ENST00000590260 PUM3Q15397 648 aaKnown RBP22.72■■□□□ 1.23
DDX39A-212ENST00000590260 GRIK5Q16478 980 aa22.72■■□□□ 1.23
DDX39A-212ENST00000590260 USP48Q86UV5 1035 aa22.72■■□□□ 1.23
DDX39A-212ENST00000590260 GGA3Q9NZ52 723 aa22.72■■□□□ 1.23
DDX39A-212ENST00000590260 IQSEC3Q9UPP2 1182 aaPredicted RBP22.72■■□□□ 1.23
DDX39A-212ENST00000590260 COL1A1P02452 1464 aaPredicted RBP22.72■■□□□ 1.23
DDX39A-212ENST00000590260 IL15P40933 162 aaPredicted RBP22.71■■□□□ 1.23
DDX39A-212ENST00000590260 FKBP1AP62942 108 aaKnown RBP22.71■■□□□ 1.23
DDX39A-212ENST00000590260 CDC37L1Q7L3B6 337 aa22.71■■□□□ 1.23
DDX39A-212ENST00000590260 AOX1Q06278 1338 aa22.71■■□□□ 1.23
DDX39A-212ENST00000590260 WNT10BO00744 389 aa22.7■■□□□ 1.22
DDX39A-212ENST00000590260 POLA2Q14181 598 aa22.7■■□□□ 1.22
DDX39A-212ENST00000590260 ANGEL2Q5VTE6 544 aaKnown RBP22.7■■□□□ 1.22
DDX39A-212ENST00000590260 JMYQ8N9B5 988 aa22.7■■□□□ 1.22
DDX39A-212ENST00000590260 MKRN1Q9UHC7 482 aaKnown RBP22.7■■□□□ 1.22
DDX39A-212ENST00000590260 SCAF8Q9UPN6 1271 aaKnown RBP22.7■■□□□ 1.22
DDX39A-212ENST00000590260 CNTNAP1P78357 1384 aa22.7■■□□□ 1.22
DDX39A-212ENST00000590260 C20orf194Q5TEA3 1177 aa22.69■■□□□ 1.22
DDX39A-212ENST00000590260 LPIN2Q92539 896 aa22.69■■□□□ 1.22
DDX39A-212ENST00000590260 ATP2B3Q16720 1220 aa22.68■■□□□ 1.22
DDX39A-212ENST00000590260 KRT26Q7Z3Y9 468 aa22.68■■□□□ 1.22
DDX39A-212ENST00000590260 SSH3Q8TE77 659 aa22.68■■□□□ 1.22
DDX39A-212ENST00000590260 CEP126Q9P2H0 1117 aa22.68■■□□□ 1.22
DDX39A-212ENST00000590260 RASSF10A6NK89 507 aa22.67■■□□□ 1.22
DDX39A-212ENST00000590260 F8W031 263 aaPredicted RBP22.67■■□□□ 1.22
DDX39A-212ENST00000590260 CELF2O95319 508 aaKnown RBP22.67■■□□□ 1.22
DDX39A-212ENST00000590260 IFIT1P09914 478 aaKnown RBP22.67■■□□□ 1.22
DDX39A-212ENST00000590260 ADORA1P30542 326 aa22.67■■□□□ 1.22
DDX39A-212ENST00000590260 ATP8B2P98198 1209 aa22.67■■□□□ 1.22
DDX39A-212ENST00000590260 TFCP2Q12800 502 aa22.67■■□□□ 1.22
DDX39A-212ENST00000590260 MYH13Q9UKX3 1938 aa22.67■■□□□ 1.22
DDX39A-212ENST00000590260 ECM29Q5VYK3 1845 aa22.66■■□□□ 1.22
DDX39A-212ENST00000590260 SLC5A1P13866 664 aa22.66■■□□□ 1.22
DDX39A-212ENST00000590260 MFSD14BQ5SR56 506 aa22.66■■□□□ 1.22
DDX39A-212ENST00000590260 OGFOD1Q8N543 542 aa22.66■■□□□ 1.22
DDX39A-212ENST00000590260 DCPSQ96C86 337 aaKnown RBP22.66■■□□□ 1.22
DDX39A-212ENST00000590260 PITPNM2Q9BZ72 1349 aa22.65■■□□□ 1.22
DDX39A-212ENST00000590260 CAVIN4Q5BKX8 364 aa22.65■■□□□ 1.22
DDX39A-212ENST00000590260 MTMR14Q8NCE2 650 aa22.65■■□□□ 1.22
DDX39A-212ENST00000590260 COG6Q9Y2V7 657 aa22.65■■□□□ 1.22
DDX39A-212ENST00000590260 TLL2Q9Y6L7 1015 aa22.65■■□□□ 1.22
DDX39A-212ENST00000590260 PHKA1P46020 1223 aa22.64■■□□□ 1.21
DDX39A-212ENST00000590260 TIMM10P62072 90 aa22.64■■□□□ 1.21
DDX39A-212ENST00000590260 CHAF1AQ13111 956 aaPredicted RBP22.64■■□□□ 1.21
DDX39A-212ENST00000590260 MVPQ14764 893 aaKnown RBP22.64■■□□□ 1.21
DDX39A-212ENST00000590260 CEP85Q6P2H3 762 aa22.64■■□□□ 1.21
DDX39A-212ENST00000590260 VEGFBP49765 207 aa22.63■■□□□ 1.21
DDX39A-212ENST00000590260 MMP14P50281 582 aa22.63■■□□□ 1.21
DDX39A-212ENST00000590260 VPS37DQ86XT2 251 aa22.63■■□□□ 1.21
DDX39A-212ENST00000590260 PRMT6Q96LA8 375 aaPredicted RBP22.63■■□□□ 1.21
DDX39A-212ENST00000590260 ZNF408Q9H9D4 720 aa22.63■■□□□ 1.21
DDX39A-212ENST00000590260 HDAC9Q9UKV0 1011 aa22.63■■□□□ 1.21
DDX39A-212ENST00000590260 THSD7BQ9C0I4 1608 aa22.63■■□□□ 1.21
DDX39A-212ENST00000590260 PCNTO95613 3336 aa22.62■■□□□ 1.21
DDX39A-212ENST00000590260 CFAP100Q494V2 611 aa22.62■■□□□ 1.21
DDX39A-212ENST00000590260 SAPCD2Q86UD0 394 aa22.62■■□□□ 1.21
DDX39A-212ENST00000590260 CDCA5Q96FF9 252 aa22.62■■□□□ 1.21
DDX39A-212ENST00000590260 YTHDC1Q96MU7 727 aaKnown RBP22.62■■□□□ 1.21
DDX39A-212ENST00000590260 ABT1Q9ULW3 272 aaKnown RBP22.62■■□□□ 1.21
DDX39A-212ENST00000590260 A0A1B0GUL7 405 aa22.61■■□□□ 1.21
DDX39A-212ENST00000590260 DEFB115Q30KQ5 88 aa22.61■■□□□ 1.21
DDX39A-212ENST00000590260 PRAMEF18Q5VWM3 479 aa22.61■■□□□ 1.21
DDX39A-212ENST00000590260 SULF1Q8IWU6 871 aa22.61■■□□□ 1.21
DDX39A-212ENST00000590260 SPDYE2BA6NHP3 402 aa22.6■■□□□ 1.21
DDX39A-212ENST00000590260 SPDYE6P0CI01 402 aa22.6■■□□□ 1.21
DDX39A-212ENST00000590260 ZBTB40Q9NUA8 1239 aa22.6■■□□□ 1.21
DDX39A-212ENST00000590260 TTF2Q9UNY4 1162 aaKnown RBP22.6■■□□□ 1.21
DDX39A-212ENST00000590260 NOP58Q9Y2X3 529 aaKnown RBP22.6■■□□□ 1.21
DDX39A-212ENST00000590260 ZBTB22O15209 634 aa22.59■■□□□ 1.21
DDX39A-212ENST00000590260 MS4A1P11836 297 aa22.59■■□□□ 1.21
DDX39A-212ENST00000590260 DLGAP5Q15398 846 aa22.59■■□□□ 1.21
DDX39A-212ENST00000590260 CCDC102BQ68D86 513 aa22.59■■□□□ 1.21
DDX39A-212ENST00000590260 SIRT2Q8IXJ6 389 aa22.59■■□□□ 1.21
DDX39A-212ENST00000590260 XAGE2Q96GT9 111 aa22.59■■□□□ 1.21
DDX39A-212ENST00000590260 CYP4F22Q6NT55 531 aa22.58■■□□□ 1.21
DDX39A-212ENST00000590260 FRAT2O75474 233 aaPredicted RBP22.57■■□□□ 1.2
DDX39A-212ENST00000590260 G3BP1Q13283 466 aaKnown RBP eCLIP22.57■■□□□ 1.2
DDX39A-212ENST00000590260 GBA2Q9HCG7 927 aaPredicted RBP22.57■■□□□ 1.2
DDX39A-212ENST00000590260 SERPINA10Q9UK55 444 aa22.57■■□□□ 1.2
DDX39A-212ENST00000590260 DDX19BQ9UMR2 479 aa22.57■■□□□ 1.2
DDX39A-212ENST00000590260 SSC5DA1L4H1 1573 aa22.57■■□□□ 1.2
DDX39A-212ENST00000590260 CLRN2A0PK11 232 aa22.56■■□□□ 1.2
DDX39A-212ENST00000590260 SURF6O75683 361 aaKnown RBP22.56■■□□□ 1.2
DDX39A-212ENST00000590260 CRKP46108 304 aa22.56■■□□□ 1.2
DDX39A-212ENST00000590260 RASGRF1Q13972 1273 aa22.56■■□□□ 1.2
DDX39A-212ENST00000590260 PDE3AQ14432 1141 aa22.56■■□□□ 1.2
DDX39A-212ENST00000590260 TBC1D22AQ8WUA7 517 aa22.56■■□□□ 1.2
DDX39A-212ENST00000590260 AKAP2Q9Y2D5 859 aa22.56■■□□□ 1.2
DDX39A-212ENST00000590260 WDR33Q9C0J8 1336 aaKnown RBP22.56■■□□□ 1.2
DDX39A-212ENST00000590260 MOB2Q70IA6 237 aa22.55■■□□□ 1.2
DDX39A-212ENST00000590260 PAPPA2Q9BXP8 1791 aa22.55■■□□□ 1.2
DDX39A-212ENST00000590260 PRDX5P30044 214 aa22.54■■□□□ 1.2
DDX39A-212ENST00000590260 HHIPL1Q96JK4 782 aa22.54■■□□□ 1.2
DDX39A-212ENST00000590260 CAPNS2Q96L46 248 aa22.54■■□□□ 1.2
DDX39A-212ENST00000590260 TDRD3Q9H7E2 651 aaKnown RBP22.54■■□□□ 1.2
DDX39A-212ENST00000590260 SALL1Q9NSC2 1324 aa22.54■■□□□ 1.2
DDX39A-212ENST00000590260 RBM5P52756 815 aaKnown RBP eCLIP22.53■■□□□ 1.24e-7■□□□□ 8.1
DDX39A-212ENST00000590260 HDLBPQ00341 1268 aaKnown RBP22.53■■□□□ 1.2
DDX39A-212ENST00000590260 SPDYE2Q495Y8 402 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms