RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-222	ENST00000590208	C10orf67	Q8IYJ2	551 aa		18.26	■□□□□ 0.51
MBD1-222	ENST00000590208	GPHN	Q9NQX3	736 aa	Predicted RBP	18.26	■□□□□ 0.51
MBD1-222	ENST00000590208	VWA3A	A6NCI4	1184 aa		18.25	■□□□□ 0.51
MBD1-222	ENST00000590208	MUM1L1	Q5H9M0	696 aa		18.25	■□□□□ 0.51
MBD1-222	ENST00000590208	CCDC191	Q8NCU4	936 aa		18.25	■□□□□ 0.51
MBD1-222	ENST00000590208	TSPYL1	Q9H0U9	437 aa		18.25	■□□□□ 0.51
MBD1-222	ENST00000590208	CARMIL3	Q8ND23	1372 aa		18.25	■□□□□ 0.51
MBD1-222	ENST00000590208	SETD1B	Q9UPS6	1966 aa	Known RBP	18.25	■□□□□ 0.51
MBD1-222	ENST00000590208		A0A1W2PQ27	194 aa		18.25	■□□□□ 0.51
MBD1-222	ENST00000590208		A0A1W2PQ64	194 aa		18.25	■□□□□ 0.51
MBD1-222	ENST00000590208		A0A1W2PQD8	194 aa		18.25	■□□□□ 0.51
MBD1-222	ENST00000590208	LTK	P29376	864 aa		18.25	■□□□□ 0.51
MBD1-222	ENST00000590208	PDIA3	P30101	505 aa	Known RBP	18.25	■□□□□ 0.51
MBD1-222	ENST00000590208	NBPF6	Q5VWK0	638 aa		18.25	■□□□□ 0.51
MBD1-222	ENST00000590208	NBPF4	Q96M43	638 aa		18.25	■□□□□ 0.51
MBD1-222	ENST00000590208	SRRT	Q9BXP5	876 aa	Known RBP	18.25	■□□□□ 0.51
MBD1-222	ENST00000590208	PTPRU	Q92729	1446 aa		18.24	■□□□□ 0.51
MBD1-222	ENST00000590208	SERPINC1	P01008	464 aa		18.24	■□□□□ 0.51
MBD1-222	ENST00000590208	ATP5J	P18859	108 aa		18.24	■□□□□ 0.51
MBD1-222	ENST00000590208	CFAP100	Q494V2	611 aa		18.24	■□□□□ 0.51
MBD1-222	ENST00000590208	HSP90AA4P	Q58FG1	418 aa		18.24	■□□□□ 0.51
MBD1-222	ENST00000590208	IGKV5-2	P06315	115 aa		18.24	■□□□□ 0.51
MBD1-222	ENST00000590208	TFCP2	Q12800	502 aa		18.24	■□□□□ 0.51
MBD1-222	ENST00000590208	DBNDD2	Q9BQY9	259 aa		18.24	■□□□□ 0.51
MBD1-222	ENST00000590208	PARD6B	Q9BYG5	372 aa		18.24	■□□□□ 0.51
MBD1-222	ENST00000590208	RSPH14	Q9UHP6	348 aa		18.24	■□□□□ 0.51
MBD1-222	ENST00000590208	SPTLC2	O15270	562 aa		18.23	■□□□□ 0.51
MBD1-222	ENST00000590208	HDGF	P51858	240 aa	Known RBP	18.23	■□□□□ 0.51
MBD1-222	ENST00000590208	GNG11	P61952	73 aa		18.23	■□□□□ 0.51
MBD1-222	ENST00000590208	EXOSC10	Q01780	885 aa	Known RBP	18.23	■□□□□ 0.51
MBD1-222	ENST00000590208	C14orf37	Q86TY3	774 aa		18.23	■□□□□ 0.51
MBD1-222	ENST00000590208	TAOK2	Q9UL54	1235 aa		18.23	■□□□□ 0.51
MBD1-222	ENST00000590208	HDAC5	Q9UQL6	1122 aa		18.23	■□□□□ 0.51
MBD1-222	ENST00000590208	RAB11FIP4	Q86YS3	637 aa		18.23	■□□□□ 0.51
MBD1-222	ENST00000590208	PPP2R2C	Q9Y2T4	447 aa		18.23	■□□□□ 0.51
MBD1-222	ENST00000590208	ADAMTS13	Q76LX8	1427 aa		18.23	■□□□□ 0.51
MBD1-222	ENST00000590208	MYO1C	O00159	1063 aa		18.22	■□□□□ 0.51
MBD1-222	ENST00000590208	CCP110	O43303	1012 aa		18.22	■□□□□ 0.51
MBD1-222	ENST00000590208	LMAN1	P49257	510 aa		18.22	■□□□□ 0.51
MBD1-222	ENST00000590208	FUT8	Q9BYC5	575 aa		18.22	■□□□□ 0.51
MBD1-222	ENST00000590208	ZSWIM4	Q9H7M6	989 aa		18.22	■□□□□ 0.51
MBD1-222	ENST00000590208	ARFGAP3	Q9NP61	516 aa		18.22	■□□□□ 0.51
MBD1-222	ENST00000590208	PIK3C2A	O00443	1686 aa		18.22	■□□□□ 0.51
MBD1-222	ENST00000590208		H3BQF6	201 aa		18.22	■□□□□ 0.51
MBD1-222	ENST00000590208	PFKFB1	P16118	471 aa		18.22	■□□□□ 0.51
MBD1-222	ENST00000590208	MARCKS	P29966	332 aa	Predicted RBP	18.22	■□□□□ 0.51
MBD1-222	ENST00000590208	PSME1	Q06323	249 aa		18.22	■□□□□ 0.51
MBD1-222	ENST00000590208	GPS2	Q13227	327 aa		18.22	■□□□□ 0.51
MBD1-222	ENST00000590208	TNNI3K	Q59H18	835 aa		18.22	■□□□□ 0.51
MBD1-222	ENST00000590208	ABTB2	Q8N961	1025 aa		18.22	■□□□□ 0.51
MBD1-222	ENST00000590208	ADAM21	Q9UKJ8	722 aa		18.22	■□□□□ 0.51
MBD1-222	ENST00000590208	FPGT-TNNI3K	V9GXZ4	949 aa		18.22	■□□□□ 0.51
MBD1-222	ENST00000590208	ABCC6	O95255	1503 aa		18.22	■□□□□ 0.51
MBD1-222	ENST00000590208	ATP8B1	O43520	1251 aa		18.22	■□□□□ 0.51
MBD1-222	ENST00000590208	TNNT3	P45378	269 aa	Predicted RBP	18.22	■□□□□ 0.51
MBD1-222	ENST00000590208	PPP2R3A	Q06190	1150 aa		18.22	■□□□□ 0.51
MBD1-222	ENST00000590208	ZNF530	Q6P9A1	599 aa	Predicted RBP	18.22	■□□□□ 0.51
MBD1-222	ENST00000590208	TMEM139	Q8IV31	216 aa		18.21	■□□□□ 0.51
MBD1-222	ENST00000590208	GPR161	Q8N6U8	529 aa	Known RBP	18.21	■□□□□ 0.51
MBD1-222	ENST00000590208	RASSF4	Q9H2L5	321 aa		18.21	■□□□□ 0.51
MBD1-222	ENST00000590208	MROH7-TTC4	A0A0A0MT08	1334 aa		18.21	■□□□□ 0.51
MBD1-222	ENST00000590208	UTY	O14607	1347 aa		18.21	■□□□□ 0.51
MBD1-222	ENST00000590208		E7EWF7	191 aa		18.21	■□□□□ 0.51
MBD1-222	ENST00000590208	HMGB1	P09429	215 aa	Known RBP	18.21	■□□□□ 0.51
MBD1-222	ENST00000590208	CASQ1	P31415	396 aa		18.21	■□□□□ 0.51
MBD1-222	ENST00000590208	MAP3K9	P80192	1104 aa		18.21	■□□□□ 0.51
MBD1-222	ENST00000590208	WDHD1	O75717	1129 aa	Predicted RBP	18.2	■□□□□ 0.5
MBD1-222	ENST00000590208	TPM1	P09493	284 aa		18.2	■□□□□ 0.5
MBD1-222	ENST00000590208	TOP1	P11387	765 aa	Known RBP	18.2	■□□□□ 0.5
MBD1-222	ENST00000590208	AXDND1	Q5T1B0	1012 aa	Predicted RBP	18.2	■□□□□ 0.5
MBD1-222	ENST00000590208	KCNG4	Q8TDN1	519 aa		18.2	■□□□□ 0.5
MBD1-222	ENST00000590208	AGXT2	Q9BYV1	514 aa		18.2	■□□□□ 0.5
MBD1-222	ENST00000590208	NCAPD2	Q15021	1401 aa		18.2	■□□□□ 0.5
MBD1-222	ENST00000590208	LAMA4	Q16363	1823 aa		18.2	■□□□□ 0.5
MBD1-222	ENST00000590208	KIF28P	B7ZC32	967 aa		18.2	■□□□□ 0.5
MBD1-222	ENST00000590208	TTLL5	Q6EMB2	1281 aa		18.2	■□□□□ 0.5
MBD1-222	ENST00000590208	RSRC2	Q7L4I2	434 aa	Known RBP	18.2	■□□□□ 0.5
MBD1-222	ENST00000590208	IKBKB	O14920	756 aa		18.19	■□□□□ 0.5
MBD1-222	ENST00000590208	MYSM1	Q5VVJ2	828 aa		18.19	■□□□□ 0.5
MBD1-222	ENST00000590208	TOGARAM2	Q6ZUX3	1019 aa		18.19	■□□□□ 0.5
MBD1-222	ENST00000590208	RIC3	Q7Z5B4	369 aa		18.19	■□□□□ 0.5
MBD1-222	ENST00000590208	VSTM4	Q8IW00	320 aa		18.19	■□□□□ 0.5
MBD1-222	ENST00000590208	FANCL	Q9NW38	375 aa		18.19	■□□□□ 0.5
MBD1-222	ENST00000590208	MRFAP1	Q9Y605	127 aa		18.19	■□□□□ 0.5
MBD1-222	ENST00000590208	RGPD8	O14715	1765 aa	Predicted RBP	18.19	■□□□□ 0.5
MBD1-222	ENST00000590208	PNOC	Q13519	176 aa		18.19	■□□□□ 0.5
MBD1-222	ENST00000590208	PDILT	Q8N807	584 aa		18.19	■□□□□ 0.5
MBD1-222	ENST00000590208	LRRC59	Q96AG4	307 aa	Known RBP	18.19	■□□□□ 0.5
MBD1-222	ENST00000590208	DHX58	Q96C10	678 aa		18.19	■□□□□ 0.5
MBD1-222	ENST00000590208	C8orf76	Q96K31	380 aa		18.19	■□□□□ 0.5
MBD1-222	ENST00000590208	INTS13	Q9NVM9	706 aa		18.19	■□□□□ 0.5
MBD1-222	ENST00000590208	ZSCAN12	O43309	604 aa		18.19	■□□□□ 0.5
MBD1-222	ENST00000590208	RBM33	Q96EV2	1170 aa	Known RBP	18.19	■□□□□ 0.5
MBD1-222	ENST00000590208	MPHOSPH8	Q99549	860 aa		18.19	■□□□□ 0.5
MBD1-222	ENST00000590208	IRX2	Q9BZI1	471 aa	Predicted RBP	18.19	■□□□□ 0.5
MBD1-222	ENST00000590208	POLR3E	Q9NVU0	708 aa		18.19	■□□□□ 0.5
MBD1-222	ENST00000590208	DHX8	Q14562	1220 aa	Known RBP	18.18	■□□□□ 0.5
MBD1-222	ENST00000590208	LONRF2	Q1L5Z9	754 aa		18.18	■□□□□ 0.5
MBD1-222	ENST00000590208	DESI2	Q9BSY9	194 aa		18.18	■□□□□ 0.5
MBD1-222	ENST00000590208	KDM3B	Q7LBC6	1761 aa		18.18	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms