RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 PRMT6Q96LA8 375 aaPredicted RBP16.49■□□□□ 0.23
PRKCSH-210ENST00000589990 JAG2Q9Y219 1238 aa16.49■□□□□ 0.23
PRKCSH-210ENST00000589990 LEMD3Q9Y2U8 911 aa16.49■□□□□ 0.23
PRKCSH-210ENST00000589990 PTCH2Q9Y6C5 1203 aa16.49■□□□□ 0.23
PRKCSH-210ENST00000589990 IRS2Q9Y4H2 1338 aa16.48■□□□□ 0.23
PRKCSH-210ENST00000589990 PI4KAP2A4QPH2 592 aa16.48■□□□□ 0.23
PRKCSH-210ENST00000589990 H0YGN5 161 aa16.48■□□□□ 0.23
PRKCSH-210ENST00000589990 TSPYL6Q8N831 410 aa16.48■□□□□ 0.23
PRKCSH-210ENST00000589990 PI4KAP1Q8N8J0 262 aa16.48■□□□□ 0.23
PRKCSH-210ENST00000589990 CD209Q9NNX6 404 aa16.48■□□□□ 0.23
PRKCSH-210ENST00000589990 A0A1B0GUL6 1792 aa16.47■□□□□ 0.23
PRKCSH-210ENST00000589990 PPP1R12BO60237 982 aaPredicted RBP16.47■□□□□ 0.23
PRKCSH-210ENST00000589990 CFAP100Q494V2 611 aa16.47■□□□□ 0.23
PRKCSH-210ENST00000589990 UBE3BQ7Z3V4 1068 aa16.47■□□□□ 0.23
PRKCSH-210ENST00000589990 ELP3Q9H9T3 547 aa16.47■□□□□ 0.23
PRKCSH-210ENST00000589990 VEZTQ9HBM0 779 aa16.47■□□□□ 0.23
PRKCSH-210ENST00000589990 TESPA1A2RU30 521 aaPredicted RBP16.46■□□□□ 0.23
PRKCSH-210ENST00000589990 SPDYE2BA6NHP3 402 aa16.46■□□□□ 0.23
PRKCSH-210ENST00000589990 NEURL1BA8MQ27 555 aa16.46■□□□□ 0.23
PRKCSH-210ENST00000589990 TAF5LO75529 589 aa16.46■□□□□ 0.23
PRKCSH-210ENST00000589990 SPDYE6P0CI01 402 aa16.46■□□□□ 0.23
PRKCSH-210ENST00000589990 ITGA6P23229 1130 aa16.46■□□□□ 0.23
PRKCSH-210ENST00000589990 RALBP1Q15311 655 aa16.46■□□□□ 0.23
PRKCSH-210ENST00000589990 KSR2Q6VAB6 950 aa16.46■□□□□ 0.23
PRKCSH-210ENST00000589990 MTMR14Q8NCE2 650 aa16.46■□□□□ 0.23
PRKCSH-210ENST00000589990 HELBQ8NG08 1087 aaPredicted RBP16.46■□□□□ 0.23
PRKCSH-210ENST00000589990 OTUD5Q96G74 571 aa16.46■□□□□ 0.23
PRKCSH-210ENST00000589990 MS4A4AQ96JQ5 239 aa16.46■□□□□ 0.23
PRKCSH-210ENST00000589990 H7C1W4 665 aa16.45■□□□□ 0.22
PRKCSH-210ENST00000589990 DDX58O95786 925 aaKnown RBP16.45■□□□□ 0.22
PRKCSH-210ENST00000589990 IGHMBP2P38935 993 aaKnown RBP16.45■□□□□ 0.22
PRKCSH-210ENST00000589990 MMP14P50281 582 aa16.45■□□□□ 0.22
PRKCSH-210ENST00000589990 CHRNDQ07001 517 aa16.45■□□□□ 0.22
PRKCSH-210ENST00000589990 RASA3Q14644 834 aa16.45■□□□□ 0.22
PRKCSH-210ENST00000589990 G2E3Q7L622 706 aa16.45■□□□□ 0.22
PRKCSH-210ENST00000589990 BRI3BPQ8WY22 251 aa16.45■□□□□ 0.22
PRKCSH-210ENST00000589990 OPTNQ96CV9 577 aa16.45■□□□□ 0.22
PRKCSH-210ENST00000589990 TMEM106CQ9BVX2 250 aa16.45■□□□□ 0.22
PRKCSH-210ENST00000589990 ARHGAP39Q9C0H5 1083 aa16.45■□□□□ 0.22
PRKCSH-210ENST00000589990 IFT57Q9NWB7 429 aa16.45■□□□□ 0.22
PRKCSH-210ENST00000589990 WDR43Q15061 677 aaKnown RBP eCLIP16.44■□□□□ 0.22
PRKCSH-210ENST00000589990 SLC9C1Q4G0N8 1177 aa16.44■□□□□ 0.22
PRKCSH-210ENST00000589990 SH3TC2Q8TF17 1288 aa16.44■□□□□ 0.22
PRKCSH-210ENST00000589990 ANKRD2Q9GZV1 360 aa16.44■□□□□ 0.22
PRKCSH-210ENST00000589990 PPP2R3BQ9Y5P8 575 aa16.44■□□□□ 0.22
PRKCSH-210ENST00000589990 KCNJ4P48050 445 aa16.43■□□□□ 0.22
PRKCSH-210ENST00000589990 IREB2P48200 963 aaKnown RBP16.43■□□□□ 0.22
PRKCSH-210ENST00000589990 CASP7P55210 303 aa16.43■□□□□ 0.22
PRKCSH-210ENST00000589990 SLC4A8Q2Y0W8 1093 aa16.43■□□□□ 0.22
PRKCSH-210ENST00000589990 SUPT20HL1Q3ZLR7 823 aa16.43■□□□□ 0.22
PRKCSH-210ENST00000589990 OTUD7BQ6GQQ9 843 aa16.43■□□□□ 0.22
PRKCSH-210ENST00000589990 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.43■□□□□ 0.22
PRKCSH-210ENST00000589990 ANKRD13AQ8IZ07 590 aa16.43■□□□□ 0.22
PRKCSH-210ENST00000589990 FAM43AQ8N2R8 423 aa16.43■□□□□ 0.22
PRKCSH-210ENST00000589990 MYBBP1AQ9BQG0 1328 aaKnown RBP16.43■□□□□ 0.22
PRKCSH-210ENST00000589990 APAF1O14727 1248 aa16.42■□□□□ 0.22
PRKCSH-210ENST00000589990 ECM2O94769 699 aaPredicted RBP16.42■□□□□ 0.22
PRKCSH-210ENST00000589990 GNAI1P63096 354 aa16.42■□□□□ 0.22
PRKCSH-210ENST00000589990 CCDC30Q5VVM6 783 aa16.42■□□□□ 0.22
PRKCSH-210ENST00000589990 CHRDL2Q6WN34 429 aa16.42■□□□□ 0.22
PRKCSH-210ENST00000589990 MPHOSPH8Q99549 860 aa16.42■□□□□ 0.22
PRKCSH-210ENST00000589990 RBM5P52756 815 aaKnown RBP eCLIP16.41■□□□□ 0.22
PRKCSH-210ENST00000589990 TAF1CQ15572 869 aaPredicted RBP16.41■□□□□ 0.22
PRKCSH-210ENST00000589990 TEPSINQ96N21 525 aa16.41■□□□□ 0.22
PRKCSH-210ENST00000589990 COL6A3P12111 3177 aa16.4■□□□□ 0.22
PRKCSH-210ENST00000589990 CCL15-CCL14A0A0B4J2E2 113 aa16.4■□□□□ 0.22
PRKCSH-210ENST00000589990 UNCXA6NJT0 531 aa16.4■□□□□ 0.22
PRKCSH-210ENST00000589990 MYO1BO43795 1136 aa16.4■□□□□ 0.22
PRKCSH-210ENST00000589990 CSF1RP07333 972 aa16.4■□□□□ 0.22
PRKCSH-210ENST00000589990 IL1R1P14778 569 aa16.4■□□□□ 0.22
PRKCSH-210ENST00000589990 VGLL4Q14135 290 aa16.4■□□□□ 0.22
PRKCSH-210ENST00000589990 GCKRQ14397 625 aa16.4■□□□□ 0.22
PRKCSH-210ENST00000589990 CCL15Q16663 113 aa16.4■□□□□ 0.22
PRKCSH-210ENST00000589990 TSR2Q969E8 191 aaKnown RBP16.4■□□□□ 0.22
PRKCSH-210ENST00000589990 SHISA4Q96DD7 197 aa16.4■□□□□ 0.22
PRKCSH-210ENST00000589990 PLA2G12BQ9BX93 195 aa16.4■□□□□ 0.22
PRKCSH-210ENST00000589990 RBM27Q9P2N5 1060 aaKnown RBP16.4■□□□□ 0.22
PRKCSH-210ENST00000589990 ZNF70Q9UC06 446 aaPredicted RBP16.4■□□□□ 0.22
PRKCSH-210ENST00000589990 A0A0C4DFX4 3053 aa16.4■□□□□ 0.22
PRKCSH-210ENST00000589990 NEXNQ0ZGT2 675 aa16.39■□□□□ 0.21
PRKCSH-210ENST00000589990 TMEM39BQ9GZU3 492 aa16.39■□□□□ 0.21
PRKCSH-210ENST00000589990 TDRD3Q9H7E2 651 aaKnown RBP16.39■□□□□ 0.21
PRKCSH-210ENST00000589990 LAMA3Q16787 3333 aa16.38■□□□□ 0.21
PRKCSH-210ENST00000589990 CTGFP29279 349 aa16.38■□□□□ 0.21
PRKCSH-210ENST00000589990 MTFR1Q15390 333 aa16.38■□□□□ 0.21
PRKCSH-210ENST00000589990 SPDYE2Q495Y8 402 aa16.38■□□□□ 0.21
PRKCSH-210ENST00000589990 C15orf52Q6ZUT6 534 aaKnown RBP16.38■□□□□ 0.21
PRKCSH-210ENST00000589990 NBPF11Q86T75 865 aa16.38■□□□□ 0.21
PRKCSH-210ENST00000589990 ZFYVE28Q9HCC9 887 aa16.38■□□□□ 0.21
PRKCSH-210ENST00000589990 ARAP2Q8WZ64 1704 aa16.38■□□□□ 0.21
PRKCSH-210ENST00000589990 TCP10L2B9ZVM9 353 aa16.37■□□□□ 0.21
PRKCSH-210ENST00000589990 GRIK5Q16478 980 aa16.37■□□□□ 0.21
PRKCSH-210ENST00000589990 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.37■□□□□ 0.21
PRKCSH-210ENST00000589990 ZNF594Q96JF6 807 aaPredicted RBP16.37■□□□□ 0.21
PRKCSH-210ENST00000589990 ZNF804AQ7Z570 1209 aa16.36■□□□□ 0.21
PRKCSH-210ENST00000589990 CUL9Q8IWT3 2517 aa16.35■□□□□ 0.21
PRKCSH-210ENST00000589990 ANKRD18BA2A2Z9 1011 aa16.35■□□□□ 0.21
PRKCSH-210ENST00000589990 PLIN1O60240 522 aa16.35■□□□□ 0.21
PRKCSH-210ENST00000589990 GTF2A2P52657 109 aa16.35■□□□□ 0.21
PRKCSH-210ENST00000589990 FKBP1AP62942 108 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms