RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 KIF20BQ96Q89 1820 aa11.15□□□□□ -0.62
DNMT1-219ENST00000589349 SLC35F4A4IF30 521 aa11.15□□□□□ -0.62
DNMT1-219ENST00000589349 KCNQ4P56696 695 aa11.15□□□□□ -0.62
DNMT1-219ENST00000589349 POU4F2Q12837 409 aa11.15□□□□□ -0.62
DNMT1-219ENST00000589349 NBPF10Q6P3W6 841 aaKnown RBP11.15□□□□□ -0.62
DNMT1-219ENST00000589349 MPRIPQ6WCQ1 1025 aa11.15□□□□□ -0.62
DNMT1-219ENST00000589349 NBPF15Q8N660 670 aa11.15□□□□□ -0.62
DNMT1-219ENST00000589349 CCDC155Q8N6L0 562 aa11.15□□□□□ -0.62
DNMT1-219ENST00000589349 POLKQ9UBT6 870 aa11.15□□□□□ -0.62
DNMT1-219ENST00000589349 SPG7Q9UQ90 795 aa11.15□□□□□ -0.62
DNMT1-219ENST00000589349 H3BM21 787 aa11.14□□□□□ -0.63
DNMT1-219ENST00000589349 ZBTB7BO15156 539 aaPredicted RBP11.14□□□□□ -0.63
DNMT1-219ENST00000589349 PPFIA3O75145 1194 aa11.14□□□□□ -0.63
DNMT1-219ENST00000589349 RHOQP17081 205 aa11.14□□□□□ -0.63
DNMT1-219ENST00000589349 CC2D1BQ5T0F9 858 aaKnown RBP11.14□□□□□ -0.63
DNMT1-219ENST00000589349 SIX5Q8N196 739 aa11.14□□□□□ -0.63
DNMT1-219ENST00000589349 ZNF594Q96JF6 807 aaPredicted RBP11.14□□□□□ -0.63
DNMT1-219ENST00000589349 ZNF358Q9NW07 568 aa11.14□□□□□ -0.63
DNMT1-219ENST00000589349 WNK3Q9BYP7 1800 aa11.14□□□□□ -0.63
DNMT1-219ENST00000589349 PCDH11XQ9BZA7 1347 aa11.13□□□□□ -0.63
DNMT1-219ENST00000589349 PCDH11YQ9BZA8 1340 aa11.13□□□□□ -0.63
DNMT1-219ENST00000589349 WFS1O76024 890 aa11.13□□□□□ -0.63
DNMT1-219ENST00000589349 NFX1Q12986 1120 aaKnown RBP11.13□□□□□ -0.63
DNMT1-219ENST00000589349 SLC15A2Q16348 729 aa11.13□□□□□ -0.63
DNMT1-219ENST00000589349 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.13□□□□□ -0.63
DNMT1-219ENST00000589349 RHBDD1Q8TEB9 315 aa11.13□□□□□ -0.63
DNMT1-219ENST00000589349 TFCP2L1Q9NZI6 479 aa11.13□□□□□ -0.63
DNMT1-219ENST00000589349 KIAA1024Q9UPX6 916 aa11.13□□□□□ -0.63
DNMT1-219ENST00000589349 PEAK1Q9H792 1746 aa11.12□□□□□ -0.63
DNMT1-219ENST00000589349 WASHC2AQ641Q2 1341 aa11.12□□□□□ -0.63
DNMT1-219ENST00000589349 BCL9O00512 1426 aa11.12□□□□□ -0.63
DNMT1-219ENST00000589349 FAM196BA6NMK8 535 aa11.12□□□□□ -0.63
DNMT1-219ENST00000589349 TREML4Q6UXN2 200 aa11.12□□□□□ -0.63
DNMT1-219ENST00000589349 CCNL1Q9UK58 526 aaPredicted RBP11.12□□□□□ -0.63
DNMT1-219ENST00000589349 MEGF6O75095 1541 aa11.12□□□□□ -0.63
DNMT1-219ENST00000589349 KIF24Q5T7B8 1368 aa11.12□□□□□ -0.63
DNMT1-219ENST00000589349 KIF7Q2M1P5 1343 aa11.11□□□□□ -0.63
DNMT1-219ENST00000589349 MYOM1P52179 1685 aa11.11□□□□□ -0.63
DNMT1-219ENST00000589349 SENP3-EIF4A1A0A087X0R7 540 aa11.11□□□□□ -0.63
DNMT1-219ENST00000589349 A6NJY4 79 aa11.11□□□□□ -0.63
DNMT1-219ENST00000589349 M0R2N6 131 aa11.11□□□□□ -0.63
DNMT1-219ENST00000589349 RFX1P22670 979 aa11.11□□□□□ -0.63
DNMT1-219ENST00000589349 VEGFBP49765 207 aa11.11□□□□□ -0.63
DNMT1-219ENST00000589349 EIF4A2Q14240 407 aaKnown RBP11.11□□□□□ -0.63
DNMT1-219ENST00000589349 MTFR1Q15390 333 aa11.11□□□□□ -0.63
DNMT1-219ENST00000589349 IRF7Q92985 503 aa11.11□□□□□ -0.63
DNMT1-219ENST00000589349 PDGFDQ9GZP0 370 aaPredicted RBP11.11□□□□□ -0.63
DNMT1-219ENST00000589349 TIMMDC1Q9NPL8 285 aa11.11□□□□□ -0.63
DNMT1-219ENST00000589349 DYRK1BQ9Y463 629 aa11.11□□□□□ -0.63
DNMT1-219ENST00000589349 SBF2Q86WG5 1849 aa11.11□□□□□ -0.63
DNMT1-219ENST00000589349 FAM208AQ9UK61 1670 aaKnown RBP11.11□□□□□ -0.63
DNMT1-219ENST00000589349 USP17L15C9J2P7 530 aa11.1□□□□□ -0.63
DNMT1-219ENST00000589349 USP17L10C9JJH3 530 aa11.1□□□□□ -0.63
DNMT1-219ENST00000589349 USP17L13C9JLJ4 530 aa11.1□□□□□ -0.63
DNMT1-219ENST00000589349 USP17L12C9JPN9 530 aa11.1□□□□□ -0.63
DNMT1-219ENST00000589349 USP17L11C9JVI0 530 aa11.1□□□□□ -0.63
DNMT1-219ENST00000589349 USP17L21D6R901 530 aa11.1□□□□□ -0.63
DNMT1-219ENST00000589349 USP17L18D6R9N7 530 aa11.1□□□□□ -0.63
DNMT1-219ENST00000589349 USP17L22D6RA61 530 aa11.1□□□□□ -0.63
DNMT1-219ENST00000589349 USP17L17D6RBQ6 530 aa11.1□□□□□ -0.63
DNMT1-219ENST00000589349 USP17L19D6RCP7 530 aa11.1□□□□□ -0.63
DNMT1-219ENST00000589349 USP17L20D6RJB6 530 aa11.1□□□□□ -0.63
DNMT1-219ENST00000589349 CDK2AP1O14519 115 aa11.1□□□□□ -0.63
DNMT1-219ENST00000589349 USP17L24Q0WX57 530 aa11.1□□□□□ -0.63
DNMT1-219ENST00000589349 RGPD2P0DJD1 1756 aa11.1□□□□□ -0.63
DNMT1-219ENST00000589349 SRCAPQ6ZRS2 3230 aa11.1□□□□□ -0.63
DNMT1-219ENST00000589349 NUP188Q5SRE5 1749 aa11.09□□□□□ -0.63
DNMT1-219ENST00000589349 ITGA6P23229 1130 aa11.09□□□□□ -0.63
DNMT1-219ENST00000589349 PTK7Q13308 1070 aa11.09□□□□□ -0.63
DNMT1-219ENST00000589349 CRTC2Q53ET0 693 aaPredicted RBP11.09□□□□□ -0.63
DNMT1-219ENST00000589349 C4orf17Q53FE4 359 aa11.09□□□□□ -0.63
DNMT1-219ENST00000589349 NIFKQ9BYG3 293 aaKnown RBP11.09□□□□□ -0.63
DNMT1-219ENST00000589349 LRRC4BQ9NT99 713 aa11.09□□□□□ -0.63
DNMT1-219ENST00000589349 NSD2O96028 1365 aa11.08□□□□□ -0.64
DNMT1-219ENST00000589349 CYP27B1O15528 508 aa11.08□□□□□ -0.64
DNMT1-219ENST00000589349 SEC13P55735 322 aa11.08□□□□□ -0.64
DNMT1-219ENST00000589349 PLEKHO1Q53GL0 409 aaPredicted RBP11.08□□□□□ -0.64
DNMT1-219ENST00000589349 IFNL2Q8IZJ0 200 aa11.08□□□□□ -0.64
DNMT1-219ENST00000589349 TMOD3Q9NYL9 352 aa11.08□□□□□ -0.64
DNMT1-219ENST00000589349 RREB1Q92766 1687 aa11.08□□□□□ -0.64
DNMT1-219ENST00000589349 A0A1B0GTH6 734 aa11.07□□□□□ -0.64
DNMT1-219ENST00000589349 PHKA2P46019 1235 aa11.07□□□□□ -0.64
DNMT1-219ENST00000589349 ZNF827Q17R98 1081 aa11.07□□□□□ -0.64
DNMT1-219ENST00000589349 C1orf141Q5JVX7 400 aa11.07□□□□□ -0.64
DNMT1-219ENST00000589349 SULT6B1Q6IMI4 303 aa11.07□□□□□ -0.64
DNMT1-219ENST00000589349 ZNF530Q6P9A1 599 aaPredicted RBP11.07□□□□□ -0.64
DNMT1-219ENST00000589349 CCDC82Q8N4S0 544 aa11.07□□□□□ -0.64
DNMT1-219ENST00000589349 SMARCC1Q92922 1105 aaPredicted RBP11.07□□□□□ -0.64
DNMT1-219ENST00000589349 SCHIP1Q9P0W5 487 aaPredicted RBP11.07□□□□□ -0.64
DNMT1-219ENST00000589349 NHSQ6T4R5 1651 aa11.07□□□□□ -0.64
DNMT1-219ENST00000589349 DKK1O94907 266 aa11.06□□□□□ -0.64
DNMT1-219ENST00000589349 VSIG8P0DPA2 414 aa11.06□□□□□ -0.64
DNMT1-219ENST00000589349 POLD1P28340 1107 aa11.06□□□□□ -0.64
DNMT1-219ENST00000589349 MTHFSP49914 203 aa11.06□□□□□ -0.64
DNMT1-219ENST00000589349 ANKMY2Q8IV38 441 aa11.06□□□□□ -0.64
DNMT1-219ENST00000589349 MTFR1LQ9H019 292 aa11.06□□□□□ -0.64
DNMT1-219ENST00000589349 IQSEC3Q9UPP2 1182 aaPredicted RBP11.06□□□□□ -0.64
DNMT1-219ENST00000589349 BTAF1O14981 1849 aa11.06□□□□□ -0.64
DNMT1-219ENST00000589349 MAP2P11137 1827 aaKnown RBP11.06□□□□□ -0.64
DNMT1-219ENST00000589349 SFI1A8K8P3 1242 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms