RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 HELLSQ9NRZ9 838 aa10.51□□□□□ -0.73
SMAD4-206ENST00000588860 SLC27A2O14975 620 aa10.5□□□□□ -0.73
SMAD4-206ENST00000588860 TAF5LO75529 589 aa10.5□□□□□ -0.73
SMAD4-206ENST00000588860 CASTP20810 708 aaKnown RBP10.5□□□□□ -0.73
SMAD4-206ENST00000588860 SSFA2P28290 1259 aa10.5□□□□□ -0.73
SMAD4-206ENST00000588860 RFC4P35249 363 aa10.5□□□□□ -0.73
SMAD4-206ENST00000588860 NUBP1P53384 320 aa10.5□□□□□ -0.73
SMAD4-206ENST00000588860 NECTIN1Q15223 517 aa10.5□□□□□ -0.73
SMAD4-206ENST00000588860 GPR162Q16538 588 aa10.5□□□□□ -0.73
SMAD4-206ENST00000588860 LRRFIP1Q32MZ4 808 aaKnown RBP10.5□□□□□ -0.73
SMAD4-206ENST00000588860 ZMYM1Q5SVZ6 1142 aa10.5□□□□□ -0.73
SMAD4-206ENST00000588860 RNF20Q5VTR2 975 aa10.5□□□□□ -0.73
SMAD4-206ENST00000588860 C3orf67Q6ZVT6 689 aa10.5□□□□□ -0.73
SMAD4-206ENST00000588860 AMIGO3Q86WK7 504 aa10.5□□□□□ -0.73
SMAD4-206ENST00000588860 NBPF5PQ86XG9 351 aaPredicted RBP10.5□□□□□ -0.73
SMAD4-206ENST00000588860 LPIN2Q92539 896 aa10.5□□□□□ -0.73
SMAD4-206ENST00000588860 ARHGEF1Q92888 912 aaKnown RBP10.5□□□□□ -0.73
SMAD4-206ENST00000588860 TMX3Q96JJ7 454 aa10.5□□□□□ -0.73
SMAD4-206ENST00000588860 SEC62Q99442 399 aaKnown RBP10.5□□□□□ -0.73
SMAD4-206ENST00000588860 CDC5LQ99459 802 aaKnown RBP10.5□□□□□ -0.73
SMAD4-206ENST00000588860 CCDC88AQ3V6T2 1871 aa10.5□□□□□ -0.73
SMAD4-206ENST00000588860 SLC34A2O95436 690 aa10.49□□□□□ -0.73
SMAD4-206ENST00000588860 UQCRFS1P1P0C7P4 283 aa10.49□□□□□ -0.73
SMAD4-206ENST00000588860 CPA1P15085 419 aa10.49□□□□□ -0.73
SMAD4-206ENST00000588860 FGFR2P21802 821 aa10.49□□□□□ -0.73
SMAD4-206ENST00000588860 ZAP70P43403 619 aa10.49□□□□□ -0.73
SMAD4-206ENST00000588860 RAB3GAP1Q15042 981 aa10.49□□□□□ -0.73
SMAD4-206ENST00000588860 SF3B3Q15393 1217 aaKnown RBP10.49□□□□□ -0.73
SMAD4-206ENST00000588860 SLFNL1Q499Z3 407 aa10.49□□□□□ -0.73
SMAD4-206ENST00000588860 SLC10A5Q5PT55 438 aa10.49□□□□□ -0.73
SMAD4-206ENST00000588860 TRAPPC3LQ5T215 181 aa10.49□□□□□ -0.73
SMAD4-206ENST00000588860 ANKRD18AQ8IVF6 992 aa10.49□□□□□ -0.73
SMAD4-206ENST00000588860 KLHL34Q8N239 644 aa10.49□□□□□ -0.73
SMAD4-206ENST00000588860 SLAIN1Q8ND83 568 aa10.49□□□□□ -0.73
SMAD4-206ENST00000588860 TTC14Q96N46 770 aa10.49□□□□□ -0.73
SMAD4-206ENST00000588860 TM6SF1Q9BZW5 370 aa10.49□□□□□ -0.73
SMAD4-206ENST00000588860 CWC22Q9HCG8 908 aaKnown RBP10.49□□□□□ -0.73
SMAD4-206ENST00000588860 PDRG1Q9NUG6 133 aa10.49□□□□□ -0.73
SMAD4-206ENST00000588860 HMG20BQ9P0W2 317 aa10.49□□□□□ -0.73
SMAD4-206ENST00000588860 CYP46A1Q9Y6A2 500 aa10.49□□□□□ -0.73
SMAD4-206ENST00000588860 RPAP1Q9BWH6 1393 aaPredicted RBP10.49□□□□□ -0.73
SMAD4-206ENST00000588860 TCHHQ07283 1943 aa10.48□□□□□ -0.73
SMAD4-206ENST00000588860 M0R2C6 588 aa10.48□□□□□ -0.73
SMAD4-206ENST00000588860 ZFYP08048 801 aaPredicted RBP10.48□□□□□ -0.73
SMAD4-206ENST00000588860 ARID4AP29374 1257 aaPredicted RBP10.48□□□□□ -0.73
SMAD4-206ENST00000588860 MCAMP43121 646 aa10.48□□□□□ -0.73
SMAD4-206ENST00000588860 PHKA1P46020 1223 aa10.48□□□□□ -0.73
SMAD4-206ENST00000588860 ADCK5Q3MIX3 580 aa10.48□□□□□ -0.73
SMAD4-206ENST00000588860 CCDC102BQ68D86 513 aa10.48□□□□□ -0.73
SMAD4-206ENST00000588860 PI16Q6UXB8 463 aa10.48□□□□□ -0.73
SMAD4-206ENST00000588860 ZGPATQ8N5A5 531 aaKnown RBP10.48□□□□□ -0.73
SMAD4-206ENST00000588860 TNPO1Q92973 898 aaKnown RBP10.48□□□□□ -0.73
SMAD4-206ENST00000588860 ZNF512BQ96KM6 892 aaPredicted RBP10.48□□□□□ -0.73
SMAD4-206ENST00000588860 ZSWIM6Q9HCJ5 1215 aa10.48□□□□□ -0.73
SMAD4-206ENST00000588860 LRRC4BQ9NT99 713 aa10.48□□□□□ -0.73
SMAD4-206ENST00000588860 MAST3O60307 1309 aa10.48□□□□□ -0.73
SMAD4-206ENST00000588860 MAST2Q6P0Q8 1798 aa10.47□□□□□ -0.73
SMAD4-206ENST00000588860 NPHP1O15259 732 aa10.47□□□□□ -0.73
SMAD4-206ENST00000588860 PSMA5P28066 241 aa10.47□□□□□ -0.73
SMAD4-206ENST00000588860 MCM4P33991 863 aa10.47□□□□□ -0.73
SMAD4-206ENST00000588860 AK2P54819 239 aa10.47□□□□□ -0.73
SMAD4-206ENST00000588860 CHRNDQ07001 517 aa10.47□□□□□ -0.73
SMAD4-206ENST00000588860 CUL4AQ13619 759 aa10.47□□□□□ -0.73
SMAD4-206ENST00000588860 TTF1Q15361 905 aaPredicted RBP10.47□□□□□ -0.73
SMAD4-206ENST00000588860 WASHC4Q2M389 1173 aa10.47□□□□□ -0.73
SMAD4-206ENST00000588860 SLC27A3Q5K4L6 730 aa10.47□□□□□ -0.73
SMAD4-206ENST00000588860 VPS53Q5VIR6 699 aa10.47□□□□□ -0.73
SMAD4-206ENST00000588860 RUFY3Q7L099 469 aa10.47□□□□□ -0.73
SMAD4-206ENST00000588860 IFNL1Q8IU54 200 aa10.47□□□□□ -0.73
SMAD4-206ENST00000588860 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.47□□□□□ -0.73
SMAD4-206ENST00000588860 ANO8Q9HCE9 1232 aaPredicted RBP10.47□□□□□ -0.73
SMAD4-206ENST00000588860 CARMIL3Q8ND23 1372 aa10.47□□□□□ -0.73
SMAD4-206ENST00000588860 RGPD3A6NKT7 1758 aaPredicted RBP10.47□□□□□ -0.73
SMAD4-206ENST00000588860 RGPD4Q7Z3J3 1758 aa10.47□□□□□ -0.73
SMAD4-206ENST00000588860 CACNA1SQ13698 1873 aa10.47□□□□□ -0.73
SMAD4-206ENST00000588860 SNAP23O00161 211 aa10.46□□□□□ -0.73
SMAD4-206ENST00000588860 NUCB2P80303 420 aa10.46□□□□□ -0.73
SMAD4-206ENST00000588860 KRT32Q14532 448 aa10.46□□□□□ -0.73
SMAD4-206ENST00000588860 ZSCAN25Q6NSZ9 544 aa10.46□□□□□ -0.73
SMAD4-206ENST00000588860 BLOC1S2Q6QNY1 142 aa10.46□□□□□ -0.73
SMAD4-206ENST00000588860 TPTE2Q6XPS3 522 aa10.46□□□□□ -0.73
SMAD4-206ENST00000588860 CCDC24Q8N4L8 307 aa10.46□□□□□ -0.73
SMAD4-206ENST00000588860 APPBP2Q92624 585 aa10.46□□□□□ -0.73
SMAD4-206ENST00000588860 NLRP3Q96P20 1036 aa10.46□□□□□ -0.73
SMAD4-206ENST00000588860 GBP4Q96PP9 640 aa10.46□□□□□ -0.73
SMAD4-206ENST00000588860 DSCC1Q9BVC3 393 aa10.46□□□□□ -0.73
SMAD4-206ENST00000588860 PIH1D3Q9NQM4 214 aaKnown RBP10.46□□□□□ -0.73
SMAD4-206ENST00000588860 LIMCH1Q9UPQ0 1083 aa10.46□□□□□ -0.73
SMAD4-206ENST00000588860 ANKRD31Q8N7Z5 1873 aa10.46□□□□□ -0.74
SMAD4-206ENST00000588860 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.45□□□□□ -0.74
SMAD4-206ENST00000588860 DDX11L8A8MPP1 907 aa10.45□□□□□ -0.74
SMAD4-206ENST00000588860 PLSCR1O15162 318 aa10.45□□□□□ -0.74
SMAD4-206ENST00000588860 CYP2E1P05181 493 aaPredicted RBP10.45□□□□□ -0.74
SMAD4-206ENST00000588860 RPS6KB1P23443 525 aa10.45□□□□□ -0.74
SMAD4-206ENST00000588860 PRELPP51888 382 aa10.45□□□□□ -0.74
SMAD4-206ENST00000588860 NFIXQ14938 502 aa10.45□□□□□ -0.74
SMAD4-206ENST00000588860 TSGA10IPQ3SY00 556 aa10.45□□□□□ -0.74
SMAD4-206ENST00000588860 SPATA5Q8NB90 893 aa10.45□□□□□ -0.74
SMAD4-206ENST00000588860 OSBP2Q969R2 916 aa10.45□□□□□ -0.74
SMAD4-206ENST00000588860 INTS4Q96HW7 963 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms