RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 STX1AQ16623 288 aa8.38□□□□□ -1.07
SPIDR-228ENST00000588781 DNTTIP2Q5QJE6 756 aaKnown RBP8.38□□□□□ -1.07
SPIDR-228ENST00000588781 LDHAL6AQ6ZMR3 332 aa8.38□□□□□ -1.07
SPIDR-228ENST00000588781 DNAJC10Q8IXB1 793 aa8.38□□□□□ -1.07
SPIDR-228ENST00000588781 KCNG4Q8TDN1 519 aa8.38□□□□□ -1.07
SPIDR-228ENST00000588781 TCEANC2Q96MN5 208 aa8.38□□□□□ -1.07
SPIDR-228ENST00000588781 SEC62Q99442 399 aaKnown RBP8.38□□□□□ -1.07
SPIDR-228ENST00000588781 DACT1Q9NYF0 836 aa8.38□□□□□ -1.07
SPIDR-228ENST00000588781 NAP1L2Q9ULW6 460 aaPredicted RBP8.38□□□□□ -1.07
SPIDR-228ENST00000588781 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.38□□□□□ -1.07
SPIDR-228ENST00000588781 SLIT2O94813 1529 aa8.38□□□□□ -1.07
SPIDR-228ENST00000588781 CEP350Q5VT06 3117 aa8.38□□□□□ -1.07
SPIDR-228ENST00000588781 CARMIL3Q8ND23 1372 aa8.37□□□□□ -1.07
SPIDR-228ENST00000588781 A0A1W2PQ27 194 aa8.37□□□□□ -1.07
SPIDR-228ENST00000588781 A0A1W2PQ64 194 aa8.37□□□□□ -1.07
SPIDR-228ENST00000588781 A0A1W2PQD8 194 aa8.37□□□□□ -1.07
SPIDR-228ENST00000588781 EXOC5O00471 708 aa8.37□□□□□ -1.07
SPIDR-228ENST00000588781 IRS4O14654 1257 aaPredicted RBP8.37□□□□□ -1.07
SPIDR-228ENST00000588781 PRC1O43663 620 aa8.37□□□□□ -1.07
SPIDR-228ENST00000588781 ONECUT3O60422 494 aaPredicted RBP8.37□□□□□ -1.07
SPIDR-228ENST00000588781 JAK2O60674 1132 aa8.37□□□□□ -1.07
SPIDR-228ENST00000588781 YEATS4O95619 227 aa8.37□□□□□ -1.07
SPIDR-228ENST00000588781 SLC5A1P13866 664 aa8.37□□□□□ -1.07
SPIDR-228ENST00000588781 GNAT2P19087 354 aa8.37□□□□□ -1.07
SPIDR-228ENST00000588781 PDIA3P30101 505 aaKnown RBP8.37□□□□□ -1.07
SPIDR-228ENST00000588781 CDC25BP30305 580 aa8.37□□□□□ -1.07
SPIDR-228ENST00000588781 PLCB2Q00722 1185 aa8.37□□□□□ -1.07
SPIDR-228ENST00000588781 APOBRQ0VD83 1088 aa8.37□□□□□ -1.07
SPIDR-228ENST00000588781 HSP90AA2PQ14568 343 aaPredicted RBP8.37□□□□□ -1.07
SPIDR-228ENST00000588781 PARP10Q53GL7 1025 aa8.37□□□□□ -1.07
SPIDR-228ENST00000588781 NLRP10Q86W26 655 aa8.37□□□□□ -1.07
SPIDR-228ENST00000588781 JMYQ8N9B5 988 aa8.37□□□□□ -1.07
SPIDR-228ENST00000588781 TDRD7Q8NHU6 1098 aaKnown RBP8.37□□□□□ -1.07
SPIDR-228ENST00000588781 PIGBQ92521 554 aa8.37□□□□□ -1.07
SPIDR-228ENST00000588781 WASF1Q92558 559 aa8.37□□□□□ -1.07
SPIDR-228ENST00000588781 DDX11Q96FC9 970 aa8.37□□□□□ -1.07
SPIDR-228ENST00000588781 ZNF594Q96JF6 807 aaPredicted RBP8.37□□□□□ -1.07
SPIDR-228ENST00000588781 C8orf76Q96K31 380 aa8.37□□□□□ -1.07
SPIDR-228ENST00000588781 TMEM87BQ96K49 555 aa8.37□□□□□ -1.07
SPIDR-228ENST00000588781 MTA3Q9BTC8 594 aa8.37□□□□□ -1.07
SPIDR-228ENST00000588781 ANO10Q9NW15 660 aa8.37□□□□□ -1.07
SPIDR-228ENST00000588781 TFIP11Q9UBB9 837 aaKnown RBP8.37□□□□□ -1.07
SPIDR-228ENST00000588781 ZNF330Q9Y3S2 320 aaPredicted RBP8.37□□□□□ -1.07
SPIDR-228ENST00000588781 R3HCC1Q9Y3T6 440 aaKnown RBP8.37□□□□□ -1.07
SPIDR-228ENST00000588781 CCDC9Q9Y3X0 531 aaKnown RBP8.37□□□□□ -1.07
SPIDR-228ENST00000588781 PLCH1Q4KWH8 1693 aa8.37□□□□□ -1.07
SPIDR-228ENST00000588781 SALL1Q9NSC2 1324 aa8.36□□□□□ -1.07
SPIDR-228ENST00000588781 ANKRD36CQ5JPF3 1778 aa8.36□□□□□ -1.07
SPIDR-228ENST00000588781 GOLGA8BA8MQT2 603 aa8.36□□□□□ -1.07
SPIDR-228ENST00000588781 M0R2C6 588 aa8.36□□□□□ -1.07
SPIDR-228ENST00000588781 NRDCO43847 1150 aa8.36□□□□□ -1.07
SPIDR-228ENST00000588781 LIG1P18858 919 aa8.36□□□□□ -1.07
SPIDR-228ENST00000588781 ITGA6P23229 1130 aa8.36□□□□□ -1.07
SPIDR-228ENST00000588781 BAG6P46379 1132 aa8.36□□□□□ -1.07
SPIDR-228ENST00000588781 FAM160A1Q05DH4 1040 aa8.36□□□□□ -1.07
SPIDR-228ENST00000588781 MAP3K12Q12852 859 aa8.36□□□□□ -1.07
SPIDR-228ENST00000588781 PUM3Q15397 648 aaKnown RBP8.36□□□□□ -1.07
SPIDR-228ENST00000588781 SF3A1Q15459 793 aaKnown RBP8.36□□□□□ -1.07
SPIDR-228ENST00000588781 ALX1Q15699 326 aa8.36□□□□□ -1.07
SPIDR-228ENST00000588781 SYNE3Q6ZMZ3 975 aa8.36□□□□□ -1.07
SPIDR-228ENST00000588781 STOX1Q6ZVD7 989 aa8.36□□□□□ -1.07
SPIDR-228ENST00000588781 CCAR1Q8IX12 1150 aaKnown RBP8.36□□□□□ -1.07
SPIDR-228ENST00000588781 DRC7Q8IY82 874 aa8.36□□□□□ -1.07
SPIDR-228ENST00000588781 TTLL11Q8NHH1 800 aa8.36□□□□□ -1.07
SPIDR-228ENST00000588781 LPIN2Q92539 896 aa8.36□□□□□ -1.07
SPIDR-228ENST00000588781 OSBP2Q969R2 916 aa8.36□□□□□ -1.07
SPIDR-228ENST00000588781 NOL10Q9BSC4 688 aaKnown RBP8.36□□□□□ -1.07
SPIDR-228ENST00000588781 PUS3Q9BZE2 481 aaKnown RBP8.36□□□□□ -1.07
SPIDR-228ENST00000588781 CNNM2Q9H8M5 875 aa8.36□□□□□ -1.07
SPIDR-228ENST00000588781 RTEL1Q9NZ71 1219 aa8.36□□□□□ -1.07
SPIDR-228ENST00000588781 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.36□□□□□ -1.07
SPIDR-228ENST00000588781 TRMT112Q9UI30 125 aaKnown RBP8.36□□□□□ -1.07
SPIDR-228ENST00000588781 THRAP3Q9Y2W1 955 aaKnown RBP8.36□□□□□ -1.07
SPIDR-228ENST00000588781 RIPOR2Q9Y4F9 1068 aa8.36□□□□□ -1.07
SPIDR-228ENST00000588781 MRVI1Q9Y6F6 885 aa8.36□□□□□ -1.07
SPIDR-228ENST00000588781 DISP2A7MBM2 1401 aa8.36□□□□□ -1.07
SPIDR-228ENST00000588781 BCL9O00512 1426 aa8.36□□□□□ -1.07
SPIDR-228ENST00000588781 TOGARAM1Q9Y4F4 1720 aa8.35□□□□□ -1.07
SPIDR-228ENST00000588781 KLF18A0A0U1RQI7 1052 aa8.35□□□□□ -1.07
SPIDR-228ENST00000588781 BECN2A8MW95 431 aa8.35□□□□□ -1.07
SPIDR-228ENST00000588781 GPAA1O43292 621 aa8.35□□□□□ -1.07
SPIDR-228ENST00000588781 PDE8BO95263 885 aa8.35□□□□□ -1.07
SPIDR-228ENST00000588781 CYP19A1P11511 503 aaPredicted RBP8.35□□□□□ -1.07
SPIDR-228ENST00000588781 ARID4AP29374 1257 aaPredicted RBP8.35□□□□□ -1.07
SPIDR-228ENST00000588781 ADD2P35612 726 aa8.35□□□□□ -1.07
SPIDR-228ENST00000588781 ZAP70P43403 619 aa8.35□□□□□ -1.07
SPIDR-228ENST00000588781 ME1P48163 572 aa8.35□□□□□ -1.07
SPIDR-228ENST00000588781 ZNF165P49910 485 aa8.35□□□□□ -1.07
SPIDR-228ENST00000588781 TRIM29Q14134 588 aa8.35□□□□□ -1.07
SPIDR-228ENST00000588781 NOLC1Q14978 699 aaKnown RBP eCLIP8.35□□□□□ -1.07
SPIDR-228ENST00000588781 SART3Q15020 963 aaKnown RBP8.35□□□□□ -1.07
SPIDR-228ENST00000588781 R3HDM1Q15032 1099 aaKnown RBP8.35□□□□□ -1.07
SPIDR-228ENST00000588781 STK38Q15208 465 aa8.35□□□□□ -1.07
SPIDR-228ENST00000588781 TPRNQ4KMQ1 711 aa8.35□□□□□ -1.07
SPIDR-228ENST00000588781 ANO6Q4KMQ2 910 aa8.35□□□□□ -1.07
SPIDR-228ENST00000588781 TMED8Q6PL24 325 aaPredicted RBP8.35□□□□□ -1.07
SPIDR-228ENST00000588781 DZIP3Q86Y13 1208 aaKnown RBP8.35□□□□□ -1.07
SPIDR-228ENST00000588781 MB21D2Q8IYB1 491 aaPredicted RBP8.35□□□□□ -1.07
SPIDR-228ENST00000588781 SEPT12Q8IYM1 358 aa8.35□□□□□ -1.07
SPIDR-228ENST00000588781 CEP57L1Q8IYX8 460 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms