RNA–Protein interactions for RNA: ENST00000587757.5

LDLRAD4-211, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 2 BASIC

Gene LDLRAD4, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-211ENST00000587757 MYH3P11055 1940 aa22.48■■□□□ 1.19
LDLRAD4-211ENST00000587757 TERF1P54274 439 aa22.48■■□□□ 1.19
LDLRAD4-211ENST00000587757 RPS8P62241 208 aaKnown RBP22.48■■□□□ 1.19
LDLRAD4-211ENST00000587757 NECTIN1Q15223 517 aa22.48■■□□□ 1.19
LDLRAD4-211ENST00000587757 MTMR6Q9Y217 621 aa22.48■■□□□ 1.19
LDLRAD4-211ENST00000587757 CYP46A1Q9Y6A2 500 aa22.48■■□□□ 1.19
LDLRAD4-211ENST00000587757 RIC1Q4ADV7 1423 aa22.47■■□□□ 1.19
LDLRAD4-211ENST00000587757 MSL1Q68DK7 614 aa22.47■■□□□ 1.19
LDLRAD4-211ENST00000587757 EDC3Q96F86 508 aaKnown RBP22.47■■□□□ 1.19
LDLRAD4-211ENST00000587757 FAM227BQ96M60 508 aa22.47■■□□□ 1.19
LDLRAD4-211ENST00000587757 BSDC1Q9NW68 430 aaPredicted RBP22.47■■□□□ 1.19
LDLRAD4-211ENST00000587757 FAM184AQ8NB25 1140 aa22.46■■□□□ 1.19
LDLRAD4-211ENST00000587757 RBM8AQ9Y5S9 174 aaKnown RBP22.46■■□□□ 1.19
LDLRAD4-211ENST00000587757 ZNF609O15014 1411 aa22.46■■□□□ 1.19
LDLRAD4-211ENST00000587757 PTMAP06454 111 aaKnown RBP22.46■■□□□ 1.19
LDLRAD4-211ENST00000587757 ST5P78524 1137 aa22.46■■□□□ 1.19
LDLRAD4-211ENST00000587757 CHRNDQ07001 517 aa22.46■■□□□ 1.19
LDLRAD4-211ENST00000587757 NMIQ13287 307 aaPredicted RBP22.46■■□□□ 1.19
LDLRAD4-211ENST00000587757 GORABQ5T7V8 394 aa22.46■■□□□ 1.19
LDLRAD4-211ENST00000587757 DDX46Q7L014 1031 aaKnown RBP22.46■■□□□ 1.19
LDLRAD4-211ENST00000587757 ATP6V1DQ9Y5K8 247 aa22.46■■□□□ 1.19
LDLRAD4-211ENST00000587757 COL24A1Q17RW2 1714 aa22.46■■□□□ 1.19
LDLRAD4-211ENST00000587757 ME3Q16798 604 aa22.45■■□□□ 1.18
LDLRAD4-211ENST00000587757 ZSCAN31Q96LW9 406 aaPredicted RBP22.45■■□□□ 1.18
LDLRAD4-211ENST00000587757 SH2B1Q9NRF2 756 aaPredicted RBP22.45■■□□□ 1.18
LDLRAD4-211ENST00000587757 MMP10P09238 476 aa22.45■■□□□ 1.18
LDLRAD4-211ENST00000587757 FGFR2P21802 821 aa22.45■■□□□ 1.18
LDLRAD4-211ENST00000587757 UVSSAQ2YD98 709 aa22.45■■□□□ 1.18
LDLRAD4-211ENST00000587757 CREB3L3Q68CJ9 461 aa22.45■■□□□ 1.18
LDLRAD4-211ENST00000587757 MINPP1Q9UNW1 487 aa22.45■■□□□ 1.18
LDLRAD4-211ENST00000587757 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.45■■□□□ 1.18
LDLRAD4-211ENST00000587757 COL4A1P02462 1669 aa22.44■■□□□ 1.18
LDLRAD4-211ENST00000587757 WTIPA6NIX2 430 aaPredicted RBP22.44■■□□□ 1.18
LDLRAD4-211ENST00000587757 DNM1Q05193 864 aaKnown RBP22.44■■□□□ 1.18
LDLRAD4-211ENST00000587757 COL9A3Q14050 684 aaPredicted RBP22.44■■□□□ 1.18
LDLRAD4-211ENST00000587757 PUM3Q15397 648 aaKnown RBP22.44■■□□□ 1.18
LDLRAD4-211ENST00000587757 CCDC158Q5M9N0 1113 aa22.44■■□□□ 1.18
LDLRAD4-211ENST00000587757 HAUS7Q99871 368 aa22.44■■□□□ 1.18
LDLRAD4-211ENST00000587757 PDGFDQ9GZP0 370 aaPredicted RBP22.44■■□□□ 1.18
LDLRAD4-211ENST00000587757 USP25Q9UHP3 1055 aa22.44■■□□□ 1.18
LDLRAD4-211ENST00000587757 NECAB1Q8N987 351 aa22.43■■□□□ 1.18
LDLRAD4-211ENST00000587757 LPIN2Q92539 896 aa22.43■■□□□ 1.18
LDLRAD4-211ENST00000587757 DNAJC2Q99543 621 aaKnown RBP22.43■■□□□ 1.18
LDLRAD4-211ENST00000587757 CSPP1Q1MSJ5 1256 aa22.43■■□□□ 1.18
LDLRAD4-211ENST00000587757 CCDC125Q86Z20 511 aa22.43■■□□□ 1.18
LDLRAD4-211ENST00000587757 LETM1O95202 739 aaPredicted RBP22.42■■□□□ 1.18
LDLRAD4-211ENST00000587757 ZKSCAN1P17029 563 aaPredicted RBP22.42■■□□□ 1.18
LDLRAD4-211ENST00000587757 MAP4K1Q92918 833 aa22.42■■□□□ 1.18
LDLRAD4-211ENST00000587757 RGPD3A6NKT7 1758 aaPredicted RBP22.42■■□□□ 1.18
LDLRAD4-211ENST00000587757 RGPD4Q7Z3J3 1758 aa22.42■■□□□ 1.18
LDLRAD4-211ENST00000587757 A0A0D9SFI3 127 aa22.42■■□□□ 1.18
LDLRAD4-211ENST00000587757 CRY2Q49AN0 593 aa22.42■■□□□ 1.18
LDLRAD4-211ENST00000587757 TPCN1Q9ULQ1 816 aa22.42■■□□□ 1.18
LDLRAD4-211ENST00000587757 VPS37CA5D8V6 355 aaPredicted RBP22.41■■□□□ 1.18
LDLRAD4-211ENST00000587757 SLC27A2O14975 620 aa22.41■■□□□ 1.18
LDLRAD4-211ENST00000587757 IFIT1P09914 478 aaKnown RBP22.41■■□□□ 1.18
LDLRAD4-211ENST00000587757 KCNJ4P48050 445 aa22.41■■□□□ 1.18
LDLRAD4-211ENST00000587757 SNRKQ9NRH2 765 aa22.41■■□□□ 1.18
LDLRAD4-211ENST00000587757 PARP3Q9Y6F1 533 aa22.41■■□□□ 1.18
LDLRAD4-211ENST00000587757 HIP1O00291 1037 aa22.4■■□□□ 1.18
LDLRAD4-211ENST00000587757 TTC39AQ5SRH9 613 aa22.4■■□□□ 1.18
LDLRAD4-211ENST00000587757 FUCA2Q9BTY2 467 aa22.4■■□□□ 1.18
LDLRAD4-211ENST00000587757 LAMB2P55268 1798 aa22.4■■□□□ 1.18
LDLRAD4-211ENST00000587757 MED23Q9ULK4 1368 aa22.4■■□□□ 1.18
LDLRAD4-211ENST00000587757 SCARF1Q14162 830 aa22.4■■□□□ 1.18
LDLRAD4-211ENST00000587757 KLRG2A4D1S0 409 aaPredicted RBP22.39■■□□□ 1.18
LDLRAD4-211ENST00000587757 MPNDQ8N594 471 aa22.39■■□□□ 1.18
LDLRAD4-211ENST00000587757 RPGRQ92834 1020 aaKnown RBP22.39■■□□□ 1.18
LDLRAD4-211ENST00000587757 FKBP4Q02790 459 aaKnown RBP eCLIP22.39■■□□□ 1.17
LDLRAD4-211ENST00000587757 KIAA2012Q0VF49 1180 aa22.39■■□□□ 1.17
LDLRAD4-211ENST00000587757 CCDC102BQ68D86 513 aa22.39■■□□□ 1.17
LDLRAD4-211ENST00000587757 GIMAP6Q6P9H5 292 aa22.39■■□□□ 1.17
LDLRAD4-211ENST00000587757 FSD1Q9BTV5 496 aa22.39■■□□□ 1.17
LDLRAD4-211ENST00000587757 TAF6LQ9Y6J9 622 aa22.39■■□□□ 1.17
LDLRAD4-211ENST00000587757 GOLIM4O00461 696 aa22.38■■□□□ 1.17
LDLRAD4-211ENST00000587757 ADCY5O95622 1261 aa22.38■■□□□ 1.17
LDLRAD4-211ENST00000587757 SLC5A1P13866 664 aa22.38■■□□□ 1.17
LDLRAD4-211ENST00000587757 GRAPQ13588 217 aa22.38■■□□□ 1.17
LDLRAD4-211ENST00000587757 GRAPLQ8TC17 118 aaPredicted RBP22.38■■□□□ 1.17
LDLRAD4-211ENST00000587757 BRIP1Q9BX63 1249 aa22.38■■□□□ 1.17
LDLRAD4-211ENST00000587757 LRP5O75197 1615 aa22.38■■□□□ 1.17
LDLRAD4-211ENST00000587757 UQCRHLA0A096LP55 91 aa22.38■■□□□ 1.17
LDLRAD4-211ENST00000587757 UQCRHP07919 91 aa22.38■■□□□ 1.17
LDLRAD4-211ENST00000587757 PHKA1P46020 1223 aa22.38■■□□□ 1.17
LDLRAD4-211ENST00000587757 SLC51AQ86UW1 340 aa22.38■■□□□ 1.17
LDLRAD4-211ENST00000587757 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.38■■□□□ 1.17
LDLRAD4-211ENST00000587757 PAG1Q9NWQ8 432 aa22.38■■□□□ 1.17
LDLRAD4-211ENST00000587757 TAF1P21675 1872 aa22.37■■□□□ 1.17
LDLRAD4-211ENST00000587757 PI16Q6UXB8 463 aa22.37■■□□□ 1.17
LDLRAD4-211ENST00000587757 TCEANC2Q96MN5 208 aa22.37■■□□□ 1.17
LDLRAD4-211ENST00000587757 CHGBP05060 677 aa22.36■■□□□ 1.17
LDLRAD4-211ENST00000587757 PSMA5P28066 241 aa22.36■■□□□ 1.17
LDLRAD4-211ENST00000587757 BCAMP50895 628 aa22.36■■□□□ 1.17
LDLRAD4-211ENST00000587757 CDC37L1Q7L3B6 337 aa22.36■■□□□ 1.17
LDLRAD4-211ENST00000587757 ZNF589Q86UQ0 364 aaPredicted RBP22.36■■□□□ 1.17
LDLRAD4-211ENST00000587757 RBM17Q96I25 401 aaKnown RBP22.36■■□□□ 1.17
LDLRAD4-211ENST00000587757 ZNF830Q96NB3 372 aaPredicted RBP22.36■■□□□ 1.17
LDLRAD4-211ENST00000587757 HOXA10P31260 410 aaPredicted RBP22.35■■□□□ 1.17
LDLRAD4-211ENST00000587757 MCAMP43121 646 aa22.35■■□□□ 1.17
LDLRAD4-211ENST00000587757 ZNF512BQ96KM6 892 aaPredicted RBP22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms