RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 SLC15A2Q16348 729 aa23.71■■□□□ 1.39
TRIM47-204ENST00000587339 GPAA1O43292 621 aa23.71■■□□□ 1.39
TRIM47-204ENST00000587339 CPA1P15085 419 aa23.71■■□□□ 1.39
TRIM47-204ENST00000587339 KLRK1P26718 216 aa23.71■■□□□ 1.39
TRIM47-204ENST00000587339 HOXA10P31260 410 aaPredicted RBP23.71■■□□□ 1.39
TRIM47-204ENST00000587339 FBXO33Q7Z6M2 555 aa23.71■■□□□ 1.39
TRIM47-204ENST00000587339 BRIP1Q9BX63 1249 aa23.71■■□□□ 1.39
TRIM47-204ENST00000587339 ANO8Q9HCE9 1232 aaPredicted RBP23.71■■□□□ 1.39
TRIM47-204ENST00000587339 PARP3Q9Y6F1 533 aa23.71■■□□□ 1.39
TRIM47-204ENST00000587339 TAF6LQ9Y6J9 622 aa23.71■■□□□ 1.39
TRIM47-204ENST00000587339 AK2P54819 239 aa23.7■■□□□ 1.38
TRIM47-204ENST00000587339 SF3B2Q13435 895 aaKnown RBP23.7■■□□□ 1.38
TRIM47-204ENST00000587339 PDRG1Q9NUG6 133 aa23.7■■□□□ 1.38
TRIM47-204ENST00000587339 DENND2AQ9ULE3 1009 aa23.7■■□□□ 1.38
TRIM47-204ENST00000587339 CIZ1Q9ULV3 898 aaPredicted RBP23.7■■□□□ 1.38
TRIM47-204ENST00000587339 XDHP47989 1333 aa23.7■■□□□ 1.38
TRIM47-204ENST00000587339 TCRBV5S4A2TA0A5A2 114 aa23.69■■□□□ 1.38
TRIM47-204ENST00000587339 HIBADHP31937 336 aaKnown RBP23.69■■□□□ 1.38
TRIM47-204ENST00000587339 STK32BQ9NY57 414 aa23.69■■□□□ 1.38
TRIM47-204ENST00000587339 LRP2BPQ9P2M1 347 aa23.69■■□□□ 1.38
TRIM47-204ENST00000587339 LEMD3Q9Y2U8 911 aa23.69■■□□□ 1.38
TRIM47-204ENST00000587339 SEMA3EO15041 775 aa23.69■■□□□ 1.38
TRIM47-204ENST00000587339 FRAT2O75474 233 aaPredicted RBP23.69■■□□□ 1.38
TRIM47-204ENST00000587339 BBOX1O75936 387 aa23.69■■□□□ 1.38
TRIM47-204ENST00000587339 MSL1Q68DK7 614 aa23.69■■□□□ 1.38
TRIM47-204ENST00000587339 BLOC1S2Q6QNY1 142 aa23.69■■□□□ 1.38
TRIM47-204ENST00000587339 MAGEB6Q8N7X4 407 aa23.69■■□□□ 1.38
TRIM47-204ENST00000587339 CRAMP1Q96RY5 1269 aa23.69■■□□□ 1.38
TRIM47-204ENST00000587339 MYO5AQ9Y4I1 1855 aaKnown RBP23.68■■□□□ 1.38
TRIM47-204ENST00000587339 DOCK2Q92608 1830 aa23.68■■□□□ 1.38
TRIM47-204ENST00000587339 NFKBIBQ15653 356 aa23.67■■□□□ 1.38
TRIM47-204ENST00000587339 ABCF2Q9UG63 623 aa23.67■■□□□ 1.38
TRIM47-204ENST00000587339 CTNNA3Q9UI47 895 aa23.67■■□□□ 1.38
TRIM47-204ENST00000587339 NRXN2Q9P2S2 1712 aa23.67■■□□□ 1.38
TRIM47-204ENST00000587339 BAG6P46379 1132 aa23.67■■□□□ 1.38
TRIM47-204ENST00000587339 COL1A1P02452 1464 aaPredicted RBP23.66■■□□□ 1.38
TRIM47-204ENST00000587339 FOXP2O15409 715 aa23.66■■□□□ 1.38
TRIM47-204ENST00000587339 CUL4AQ13619 759 aa23.66■■□□□ 1.38
TRIM47-204ENST00000587339 SLC51AQ86UW1 340 aa23.66■■□□□ 1.38
TRIM47-204ENST00000587339 AIDAQ96BJ3 306 aa23.66■■□□□ 1.38
TRIM47-204ENST00000587339 NEK1Q96PY6 1258 aa23.66■■□□□ 1.38
TRIM47-204ENST00000587339 CWC22Q9HCG8 908 aaKnown RBP23.66■■□□□ 1.38
TRIM47-204ENST00000587339 LIMCH1Q9UPQ0 1083 aa23.66■■□□□ 1.38
TRIM47-204ENST00000587339 TXNRD3Q86VQ6 643 aa23.65■■□□□ 1.38
TRIM47-204ENST00000587339 NSFL1CQ9UNZ2 370 aaKnown RBP23.65■■□□□ 1.38
TRIM47-204ENST00000587339 RPS6KB1P23443 525 aa23.65■■□□□ 1.38
TRIM47-204ENST00000587339 PDE6BP35913 854 aa23.65■■□□□ 1.38
TRIM47-204ENST00000587339 ZGPATQ8N5A5 531 aaKnown RBP23.65■■□□□ 1.38
TRIM47-204ENST00000587339 IRS2Q9Y4H2 1338 aa23.65■■□□□ 1.38
TRIM47-204ENST00000587339 PDS5AQ29RF7 1337 aaKnown RBP23.64■■□□□ 1.37
TRIM47-204ENST00000587339 FGAP02671 866 aa23.64■■□□□ 1.37
TRIM47-204ENST00000587339 SRGNP10124 158 aa23.64■■□□□ 1.37
TRIM47-204ENST00000587339 GPSM2P81274 684 aa23.64■■□□□ 1.37
TRIM47-204ENST00000587339 TMC4Q7Z404 712 aa23.63■■□□□ 1.37
TRIM47-204ENST00000587339 INTS4Q96HW7 963 aaKnown RBP23.63■■□□□ 1.37
TRIM47-204ENST00000587339 ANKRD31Q8N7Z5 1873 aa23.63■■□□□ 1.37
TRIM47-204ENST00000587339 COL9A3Q14050 684 aaPredicted RBP23.63■■□□□ 1.37
TRIM47-204ENST00000587339 IMMTQ16891 758 aaKnown RBP23.63■■□□□ 1.37
TRIM47-204ENST00000587339 TTLL5Q6EMB2 1281 aa23.63■■□□□ 1.37
TRIM47-204ENST00000587339 LARP6Q9BRS8 491 aaKnown RBP23.63■■□□□ 1.37
TRIM47-204ENST00000587339 RAI14Q9P0K7 980 aa23.63■■□□□ 1.37
TRIM47-204ENST00000587339 NPR1P16066 1061 aa23.62■■□□□ 1.37
TRIM47-204ENST00000587339 ANKRD1Q15327 319 aa23.62■■□□□ 1.37
TRIM47-204ENST00000587339 DEFB132Q7Z7B7 95 aa23.62■■□□□ 1.37
TRIM47-204ENST00000587339 STRBPQ96SI9 672 aaKnown RBP23.62■■□□□ 1.37
TRIM47-204ENST00000587339 HMGB1P09429 215 aaKnown RBP23.61■■□□□ 1.37
TRIM47-204ENST00000587339 ATP2B4P23634 1241 aa23.61■■□□□ 1.37
TRIM47-204ENST00000587339 STOX1Q6ZVD7 989 aa23.61■■□□□ 1.37
TRIM47-204ENST00000587339 GGA1Q9UJY5 639 aa23.61■■□□□ 1.37
TRIM47-204ENST00000587339 A0A0G2JLW4 131 aa23.61■■□□□ 1.37
TRIM47-204ENST00000587339 PPEF1O14829 653 aaPredicted RBP23.61■■□□□ 1.37
TRIM47-204ENST00000587339 ZBTB22O15209 634 aa23.61■■□□□ 1.37
TRIM47-204ENST00000587339 UFL1O94874 794 aa23.61■■□□□ 1.37
TRIM47-204ENST00000587339 MBD4O95243 580 aa23.61■■□□□ 1.37
TRIM47-204ENST00000587339 APPP05067 770 aa23.61■■□□□ 1.37
TRIM47-204ENST00000587339 C15orf52Q6ZUT6 534 aaKnown RBP23.61■■□□□ 1.37
TRIM47-204ENST00000587339 TCEANC2Q96MN5 208 aa23.61■■□□□ 1.37
TRIM47-204ENST00000587339 ALDH8A1Q9H2A2 487 aaPredicted RBP23.61■■□□□ 1.37
TRIM47-204ENST00000587339 PODXL2Q9NZ53 605 aa23.61■■□□□ 1.37
TRIM47-204ENST00000587339 E7EWF7 191 aa23.6■■□□□ 1.37
TRIM47-204ENST00000587339 ZNF804AQ7Z570 1209 aa23.6■■□□□ 1.37
TRIM47-204ENST00000587339 ZSCAN31Q96LW9 406 aaPredicted RBP23.6■■□□□ 1.37
TRIM47-204ENST00000587339 CYP7A1P22680 504 aa23.59■■□□□ 1.37
TRIM47-204ENST00000587339 ALDH1B1P30837 517 aa23.59■■□□□ 1.37
TRIM47-204ENST00000587339 RAB3GAP1Q15042 981 aa23.59■■□□□ 1.37
TRIM47-204ENST00000587339 SP8Q8IXZ3 490 aa23.59■■□□□ 1.37
TRIM47-204ENST00000587339 CHAF1AQ13111 956 aaPredicted RBP23.59■■□□□ 1.37
TRIM47-204ENST00000587339 ARMT1Q9H993 441 aa23.59■■□□□ 1.37
TRIM47-204ENST00000587339 ZNF213O14771 459 aa23.58■■□□□ 1.37
TRIM47-204ENST00000587339 HAND2P61296 217 aa23.58■■□□□ 1.37
TRIM47-204ENST00000587339 SH2B1Q9NRF2 756 aaPredicted RBP23.58■■□□□ 1.37
TRIM47-204ENST00000587339 ATP6V0A2Q9Y487 856 aa23.58■■□□□ 1.37
TRIM47-204ENST00000587339 PATL2C9JE40 543 aaKnown RBP23.57■■□□□ 1.36
TRIM47-204ENST00000587339 GNAT2P19087 354 aa23.57■■□□□ 1.36
TRIM47-204ENST00000587339 NUCB2P80303 420 aa23.57■■□□□ 1.36
TRIM47-204ENST00000587339 MIGA1Q8NAN2 632 aa23.57■■□□□ 1.36
TRIM47-204ENST00000587339 MASTLQ96GX5 879 aa23.57■■□□□ 1.36
TRIM47-204ENST00000587339 GPR101Q96P66 508 aaPredicted RBP23.57■■□□□ 1.36
TRIM47-204ENST00000587339 QSER1Q2KHR3 1735 aa23.57■■□□□ 1.36
TRIM47-204ENST00000587339 MYH13Q9UKX3 1938 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms