RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 METRNQ9UJH8 293 aa9.92□□□□□ -0.82
VMP1-204ENST00000587259 MAP3K2Q9Y2U5 619 aa9.92□□□□□ -0.82
VMP1-204ENST00000587259 PCDHAC2Q9Y5I4 1007 aa9.92□□□□□ -0.82
VMP1-204ENST00000587259 AKAP11Q9UKA4 1901 aa9.92□□□□□ -0.82
VMP1-204ENST00000587259 SPEF2Q9C093 1822 aa9.91□□□□□ -0.82
VMP1-204ENST00000587259 XDHP47989 1333 aa9.91□□□□□ -0.82
VMP1-204ENST00000587259 SNAP23O00161 211 aa9.91□□□□□ -0.82
VMP1-204ENST00000587259 IGKV5-2P06315 115 aa9.91□□□□□ -0.82
VMP1-204ENST00000587259 CTSWP56202 376 aa9.91□□□□□ -0.82
VMP1-204ENST00000587259 G2E3Q7L622 706 aa9.91□□□□□ -0.82
VMP1-204ENST00000587259 CCDC191Q8NCU4 936 aa9.91□□□□□ -0.82
VMP1-204ENST00000587259 TSR2Q969E8 191 aaKnown RBP9.91□□□□□ -0.82
VMP1-204ENST00000587259 METTL22Q9BUU2 404 aaPredicted RBP9.91□□□□□ -0.82
VMP1-204ENST00000587259 MINPP1Q9UNW1 487 aa9.91□□□□□ -0.82
VMP1-204ENST00000587259 PCDHB13Q9Y5F0 798 aa9.91□□□□□ -0.82
VMP1-204ENST00000587259 PAPPA2Q9BXP8 1791 aa9.91□□□□□ -0.82
VMP1-204ENST00000587259 PI4KAP2A4QPH2 592 aa9.9□□□□□ -0.82
VMP1-204ENST00000587259 WNT10BO00744 389 aa9.9□□□□□ -0.82
VMP1-204ENST00000587259 ATP2B4P23634 1241 aa9.9□□□□□ -0.82
VMP1-204ENST00000587259 PTPN12Q05209 780 aaKnown RBP9.9□□□□□ -0.82
VMP1-204ENST00000587259 DACT2Q5SW24 774 aa9.9□□□□□ -0.82
VMP1-204ENST00000587259 PI4KAP1Q8N8J0 262 aa9.9□□□□□ -0.82
VMP1-204ENST00000587259 TTLL11Q8NHH1 800 aa9.9□□□□□ -0.82
VMP1-204ENST00000587259 HDAC9Q9UKV0 1011 aa9.9□□□□□ -0.82
VMP1-204ENST00000587259 ZNF646O15015 1829 aaPredicted RBP9.89□□□□□ -0.83
VMP1-204ENST00000587259 AOX1Q06278 1338 aa9.89□□□□□ -0.83
VMP1-204ENST00000587259 CCT4P50991 539 aaKnown RBP9.89□□□□□ -0.83
VMP1-204ENST00000587259 KIAA0825Q8IV33 1275 aa9.89□□□□□ -0.83
VMP1-204ENST00000587259 SLC39A7Q92504 469 aa9.89□□□□□ -0.83
VMP1-204ENST00000587259 IFT57Q9NWB7 429 aa9.89□□□□□ -0.83
VMP1-204ENST00000587259 JAG2Q9Y219 1238 aa9.89□□□□□ -0.83
VMP1-204ENST00000587259 PSME4Q14997 1843 aa9.89□□□□□ -0.83
VMP1-204ENST00000587259 PITPNM2Q9BZ72 1349 aa9.88□□□□□ -0.83
VMP1-204ENST00000587259 GPR25O00155 361 aa9.88□□□□□ -0.83
VMP1-204ENST00000587259 C7P10643 843 aa9.88□□□□□ -0.83
VMP1-204ENST00000587259 MS4A1P11836 297 aa9.88□□□□□ -0.83
VMP1-204ENST00000587259 AAMPQ13685 434 aa9.88□□□□□ -0.83
VMP1-204ENST00000587259 UBE3BQ7Z3V4 1068 aa9.88□□□□□ -0.83
VMP1-204ENST00000587259 PODNQ7Z5L7 613 aa9.88□□□□□ -0.83
VMP1-204ENST00000587259 CLMNQ96JQ2 1002 aa9.88□□□□□ -0.83
VMP1-204ENST00000587259 ZNF609O15014 1411 aa9.88□□□□□ -0.83
VMP1-204ENST00000587259 MED23Q9ULK4 1368 aa9.88□□□□□ -0.83
VMP1-204ENST00000587259 F8W031 263 aaPredicted RBP9.87□□□□□ -0.83
VMP1-204ENST00000587259 GNAI1P63096 354 aa9.87□□□□□ -0.83
VMP1-204ENST00000587259 FKBP1BP68106 108 aa9.87□□□□□ -0.83
VMP1-204ENST00000587259 GTF2IP78347 998 aa9.87□□□□□ -0.83
VMP1-204ENST00000587259 IFNL1Q8IU54 200 aa9.87□□□□□ -0.83
VMP1-204ENST00000587259 HELBQ8NG08 1087 aaPredicted RBP9.87□□□□□ -0.83
VMP1-204ENST00000587259 OTUD5Q96G74 571 aa9.87□□□□□ -0.83
VMP1-204ENST00000587259 CDC5LQ99459 802 aaKnown RBP9.87□□□□□ -0.83
VMP1-204ENST00000587259 BSDC1Q9NW68 430 aaPredicted RBP9.87□□□□□ -0.83
VMP1-204ENST00000587259 ANGEL1Q9UNK9 670 aaKnown RBP9.87□□□□□ -0.83
VMP1-204ENST00000587259 FANCIQ9NVI1 1328 aa9.86□□□□□ -0.83
VMP1-204ENST00000587259 TTLL13PA6NNM8 815 aa9.86□□□□□ -0.83
VMP1-204ENST00000587259 NEURL1BA8MQ27 555 aa9.86□□□□□ -0.83
VMP1-204ENST00000587259 TAF5LO75529 589 aa9.86□□□□□ -0.83
VMP1-204ENST00000587259 DDX58O95786 925 aaKnown RBP9.86□□□□□ -0.83
VMP1-204ENST00000587259 PYGBP11216 843 aa9.86□□□□□ -0.83
VMP1-204ENST00000587259 ITGA6P23229 1130 aa9.86□□□□□ -0.83
VMP1-204ENST00000587259 TIE1P35590 1138 aa9.86□□□□□ -0.83
VMP1-204ENST00000587259 TM4SF4P48230 202 aa9.86□□□□□ -0.83
VMP1-204ENST00000587259 PDE3AQ14432 1141 aa9.86□□□□□ -0.83
VMP1-204ENST00000587259 CCDC30Q5VVM6 783 aa9.86□□□□□ -0.83
VMP1-204ENST00000587259 TTLL5Q6EMB2 1281 aa9.86□□□□□ -0.83
VMP1-204ENST00000587259 KSR2Q6VAB6 950 aa9.86□□□□□ -0.83
VMP1-204ENST00000587259 OGFOD1Q8N543 542 aa9.86□□□□□ -0.83
VMP1-204ENST00000587259 CERS5Q8N5B7 392 aa9.86□□□□□ -0.83
VMP1-204ENST00000587259 ZNF804BA4D1E1 1349 aa9.85□□□□□ -0.83
VMP1-204ENST00000587259 SSC5DA1L4H1 1573 aa9.85□□□□□ -0.83
VMP1-204ENST00000587259 CLRN2A0PK11 232 aa9.85□□□□□ -0.83
VMP1-204ENST00000587259 HSP90B1P14625 803 aaKnown RBP9.85□□□□□ -0.83
VMP1-204ENST00000587259 IRX6P78412 446 aaPredicted RBP9.85□□□□□ -0.83
VMP1-204ENST00000587259 CAP1Q01518 475 aa9.85□□□□□ -0.83
VMP1-204ENST00000587259 STRIP1Q5VSL9 837 aa9.85□□□□□ -0.83
VMP1-204ENST00000587259 PRPF38BQ5VTL8 546 aaKnown RBP9.85□□□□□ -0.83
VMP1-204ENST00000587259 SPRYD7Q5W111 196 aa9.85□□□□□ -0.83
VMP1-204ENST00000587259 CCDC136Q96JN2 1154 aa9.85□□□□□ -0.83
VMP1-204ENST00000587259 COA1Q9GZY4 146 aa9.85□□□□□ -0.83
VMP1-204ENST00000587259 HTTP42858 3142 aa9.85□□□□□ -0.83
VMP1-204ENST00000587259 KIF16BQ96L93 1317 aa9.84□□□□□ -0.83
VMP1-204ENST00000587259 POTEFA5A3E0 1075 aa9.84□□□□□ -0.83
VMP1-204ENST00000587259 H7C1W4 665 aa9.84□□□□□ -0.83
VMP1-204ENST00000587259 IGF2BP3O00425 579 aaKnown RBP eCLIP9.84□□□□□ -0.83
VMP1-204ENST00000587259 NF2P35240 595 aa9.84□□□□□ -0.83
VMP1-204ENST00000587259 GJA5P36382 358 aa9.84□□□□□ -0.83
VMP1-204ENST00000587259 IGHMBP2P38935 993 aaKnown RBP9.84□□□□□ -0.83
VMP1-204ENST00000587259 CASP7P55210 303 aa9.84□□□□□ -0.83
VMP1-204ENST00000587259 CHRNDQ07001 517 aa9.84□□□□□ -0.83
VMP1-204ENST00000587259 ARMC9Q7Z3E5 817 aa9.84□□□□□ -0.83
VMP1-204ENST00000587259 ZBED3Q96IU2 234 aaPredicted RBP9.84□□□□□ -0.83
VMP1-204ENST00000587259 DEFB129Q9H1M3 183 aa9.84□□□□□ -0.83
VMP1-204ENST00000587259 FKTNO75072 461 aa9.83□□□□□ -0.84
VMP1-204ENST00000587259 KCNJ4P48050 445 aa9.83□□□□□ -0.84
VMP1-204ENST00000587259 NEXNQ0ZGT2 675 aa9.83□□□□□ -0.84
VMP1-204ENST00000587259 GCKRQ14397 625 aa9.83□□□□□ -0.84
VMP1-204ENST00000587259 ALDH1L2Q3SY69 923 aa9.83□□□□□ -0.84
VMP1-204ENST00000587259 LDLRAD1Q5T700 205 aa9.83□□□□□ -0.84
VMP1-204ENST00000587259 NBPF12Q5TAG4 269 aaPredicted RBP9.83□□□□□ -0.84
VMP1-204ENST00000587259 FBXO46Q6PJ61 603 aaPredicted RBP9.83□□□□□ -0.84
VMP1-204ENST00000587259 CDAN1Q8IWY9 1227 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms