RNA–Protein interactions for RNA: ENST00000585974.1

ZNF560-202, Transcript of zinc finger protein 560, humanhuman

TSL 3

Gene ZNF560, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-202ENST00000585974 KCNK4Q9NYG8 393 aa7.59□□□□□ -1.19
ZNF560-202ENST00000585974 DHX15O43143 795 aaKnown RBP7.58□□□□□ -1.2
ZNF560-202ENST00000585974 CPNE3O75131 537 aaKnown RBP7.58□□□□□ -1.2
ZNF560-202ENST00000585974 KIAA0319Q5VV43 1072 aa7.58□□□□□ -1.2
ZNF560-202ENST00000585974 RBCK1Q9BYM8 510 aa7.58□□□□□ -1.2
ZNF560-202ENST00000585974 ZFYVE1Q9HBF4 777 aa7.58□□□□□ -1.2
ZNF560-202ENST00000585974 RAXQ9Y2V3 346 aa7.58□□□□□ -1.2
ZNF560-202ENST00000585974 SOX1O00570 391 aaPredicted RBP7.57□□□□□ -1.2
ZNF560-202ENST00000585974 TRPA1O75762 1119 aa7.57□□□□□ -1.2
ZNF560-202ENST00000585974 CCNJLQ8IV13 435 aa7.57□□□□□ -1.2
ZNF560-202ENST00000585974 FOXD4L4Q8WXT5 416 aaPredicted RBP7.57□□□□□ -1.2
ZNF560-202ENST00000585974 ALKBH8Q96BT7 664 aaKnown RBP7.57□□□□□ -1.2
ZNF560-202ENST00000585974 FAM46AQ96IP4 442 aaKnown RBP7.57□□□□□ -1.2
ZNF560-202ENST00000585974 HHIPQ96QV1 700 aa7.57□□□□□ -1.2
ZNF560-202ENST00000585974 A0A1W2PP55 124 aa7.56□□□□□ -1.2
ZNF560-202ENST00000585974 SOWAHDA6NJG2 315 aa7.56□□□□□ -1.2
ZNF560-202ENST00000585974 ADAM11O75078 769 aa7.56□□□□□ -1.2
ZNF560-202ENST00000585974 WISP1O95388 367 aa7.56□□□□□ -1.2
ZNF560-202ENST00000585974 HP1BP3Q5SSJ5 553 aaPredicted RBP7.56□□□□□ -1.2
ZNF560-202ENST00000585974 AGGF1Q8N302 714 aaeCLIP7.56□□□□□ -1.2
ZNF560-202ENST00000585974 DDX54Q8TDD1 881 aaKnown RBP7.56□□□□□ -1.2
ZNF560-202ENST00000585974 ASAP3Q8TDY4 903 aa7.56□□□□□ -1.2
ZNF560-202ENST00000585974 SLC7A3Q8WY07 619 aa7.56□□□□□ -1.2
ZNF560-202ENST00000585974 UBL7Q96S82 380 aaPredicted RBP7.56□□□□□ -1.2
ZNF560-202ENST00000585974 STOML1Q9UBI4 398 aa7.56□□□□□ -1.2
ZNF560-202ENST00000585974 RNF112Q9ULX5 631 aa7.56□□□□□ -1.2
ZNF560-202ENST00000585974 HIF3AQ9Y2N7 669 aa7.56□□□□□ -1.2
ZNF560-202ENST00000585974 A0A096LPE4 126 aa7.55□□□□□ -1.2
ZNF560-202ENST00000585974 A0A1W2PPZ6 126 aa7.55□□□□□ -1.2
ZNF560-202ENST00000585974 SART1O43290 800 aaKnown RBP7.55□□□□□ -1.2
ZNF560-202ENST00000585974 ESRRAP11474 423 aaPredicted RBP7.55□□□□□ -1.2
ZNF560-202ENST00000585974 PTPN12Q05209 780 aaKnown RBP7.55□□□□□ -1.2
ZNF560-202ENST00000585974 RUSC1Q9BVN2 902 aa7.55□□□□□ -1.2
ZNF560-202ENST00000585974 CLEC4MQ9H2X3 399 aaPredicted RBP7.55□□□□□ -1.2
ZNF560-202ENST00000585974 LIN7BQ9HAP6 207 aa7.55□□□□□ -1.2
ZNF560-202ENST00000585974 DDX3YO15523 660 aaKnown RBP7.54□□□□□ -1.2
ZNF560-202ENST00000585974 FSTP19883 344 aa7.54□□□□□ -1.2
ZNF560-202ENST00000585974 LRP8Q14114 963 aa7.54□□□□□ -1.2
ZNF560-202ENST00000585974 ARTNQ5T4W7 220 aa7.54□□□□□ -1.2
ZNF560-202ENST00000585974 XP32Q5T750 250 aa7.54□□□□□ -1.2
ZNF560-202ENST00000585974 TMC1Q8TDI8 760 aa7.54□□□□□ -1.2
ZNF560-202ENST00000585974 UTP4Q969X6 686 aaKnown RBP7.54□□□□□ -1.2
ZNF560-202ENST00000585974 MYRFLQ96LU7 910 aa7.54□□□□□ -1.2
ZNF560-202ENST00000585974 TCF12Q99081 682 aa7.54□□□□□ -1.2
ZNF560-202ENST00000585974 SUGCTQ9HAC7 445 aa7.54□□□□□ -1.2
ZNF560-202ENST00000585974 LATS2Q9NRM7 1088 aa7.54□□□□□ -1.2
ZNF560-202ENST00000585974 SCO2A0A1W2PP80 73 aa7.53□□□□□ -1.2
ZNF560-202ENST00000585974 POLR3DP05423 398 aaPredicted RBP7.53□□□□□ -1.2
ZNF560-202ENST00000585974 NLRP12P59046 1061 aa7.53□□□□□ -1.2
ZNF560-202ENST00000585974 FDX2Q6P4F2 183 aa7.53□□□□□ -1.2
ZNF560-202ENST00000585974 CLEC10AQ8IUN9 316 aa7.53□□□□□ -1.2
ZNF560-202ENST00000585974 ARMC10Q8N2F6 343 aa7.53□□□□□ -1.2
ZNF560-202ENST00000585974 SMG8Q8ND04 991 aaKnown RBP7.53□□□□□ -1.2
ZNF560-202ENST00000585974 UBASH3BQ8TF42 649 aa7.53□□□□□ -1.2
ZNF560-202ENST00000585974 CYP4F12Q9HCS2 524 aa7.53□□□□□ -1.2
ZNF560-202ENST00000585974 ZFP64Q9NPA5 681 aa7.53□□□□□ -1.2
ZNF560-202ENST00000585974 TRAK1Q9UPV9 953 aa7.53□□□□□ -1.2
ZNF560-202ENST00000585974 EIF1AYO14602 144 aaKnown RBP7.52□□□□□ -1.21
ZNF560-202ENST00000585974 IGHA2P01877 340 aa7.52□□□□□ -1.21
ZNF560-202ENST00000585974 CYP11A1P05108 521 aa7.52□□□□□ -1.21
ZNF560-202ENST00000585974 RPS26P11Q5JNZ5 115 aaPredicted RBP7.52□□□□□ -1.21
ZNF560-202ENST00000585974 EXOSC6Q5RKV6 272 aaKnown RBP7.52□□□□□ -1.21
ZNF560-202ENST00000585974 NUTM2GQ5VZR2 741 aa7.52□□□□□ -1.21
ZNF560-202ENST00000585974 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.52□□□□□ -1.21
ZNF560-202ENST00000585974 TMPRSS13Q9BYE2 586 aa7.52□□□□□ -1.21
ZNF560-202ENST00000585974 PPP4R2Q9NY27 417 aa7.52□□□□□ -1.21
ZNF560-202ENST00000585974 PATL2C9JE40 543 aaKnown RBP7.51□□□□□ -1.21
ZNF560-202ENST00000585974 IGLV1-40P01703 118 aa7.51□□□□□ -1.21
ZNF560-202ENST00000585974 ITPKAP23677 461 aa7.51□□□□□ -1.21
ZNF560-202ENST00000585974 PCDH1Q08174 1060 aa7.51□□□□□ -1.21
ZNF560-202ENST00000585974 FAM83CQ9BQN1 747 aa7.51□□□□□ -1.21
ZNF560-202ENST00000585974 NIF3L1Q9GZT8 377 aa7.51□□□□□ -1.21
ZNF560-202ENST00000585974 EHD4Q9H223 541 aa7.51□□□□□ -1.21
ZNF560-202ENST00000585974 DCTN4Q9UJW0 460 aa7.51□□□□□ -1.21
ZNF560-202ENST00000585974 LOC100289279A0A1B0GTE1 492 aa7.5□□□□□ -1.21
ZNF560-202ENST00000585974 GPR182O15218 404 aa7.5□□□□□ -1.21
ZNF560-202ENST00000585974 GRIA4P48058 902 aa7.5□□□□□ -1.21
ZNF560-202ENST00000585974 KCNA1Q09470 495 aa7.5□□□□□ -1.21
ZNF560-202ENST00000585974 ORC1Q13415 861 aa7.5□□□□□ -1.21
ZNF560-202ENST00000585974 RNF43Q68DV7 783 aa7.5□□□□□ -1.21
ZNF560-202ENST00000585974 PRPF40BQ6NWY9 871 aaKnown RBP7.5□□□□□ -1.21
ZNF560-202ENST00000585974 FAM20CQ8IXL6 584 aa7.5□□□□□ -1.21
ZNF560-202ENST00000585974 CCDC74AQ96AQ1 378 aa7.5□□□□□ -1.21
ZNF560-202ENST00000585974 CSRNP1Q96S65 589 aa7.5□□□□□ -1.21
ZNF560-202ENST00000585974 GSTM4Q03013 218 aa7.49□□□□□ -1.21
ZNF560-202ENST00000585974 USPL1Q5W0Q7 1092 aa7.49□□□□□ -1.21
ZNF560-202ENST00000585974 BIN2Q9UBW5 565 aaPredicted RBP7.49□□□□□ -1.21
ZNF560-202ENST00000585974 METTL12A8MUP2 240 aa7.48□□□□□ -1.21
ZNF560-202ENST00000585974 GAS2O43903 313 aaKnown RBP7.48□□□□□ -1.21
ZNF560-202ENST00000585974 TIAF1O95411 115 aa7.48□□□□□ -1.21
ZNF560-202ENST00000585974 B3GALT4O96024 378 aa7.48□□□□□ -1.21
ZNF560-202ENST00000585974 BMP3P12645 472 aa7.48□□□□□ -1.21
ZNF560-202ENST00000585974 XRCC5P13010 732 aaKnown RBP7.48□□□□□ -1.21
ZNF560-202ENST00000585974 HNRNPUQ00839 825 aaKnown RBP eCLIP7.48□□□□□ -1.21
ZNF560-202ENST00000585974 ZNF423Q2M1K9 1284 aa7.48□□□□□ -1.21
ZNF560-202ENST00000585974 SPRED3Q2MJR0 410 aa7.48□□□□□ -1.21
ZNF560-202ENST00000585974 HGSNATQ68CP4 663 aa7.48□□□□□ -1.21
ZNF560-202ENST00000585974 C12orf50Q8NA57 414 aaPredicted RBP7.48□□□□□ -1.21
ZNF560-202ENST00000585974 USP26Q9BXU7 913 aa7.48□□□□□ -1.21
ZNF560-202ENST00000585974 C7orf69Q9H7B7 122 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms