RNA–Protein interactions for RNA: ENST00000585551.1

CHUK-202, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

TSL 3

Gene CHUK, Length 424 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-202ENST00000585551 YBX3P16989 372 aaKnown RBP eCLIP4.92□□□□□ -1.62
CHUK-202ENST00000585551 USP11P51784 963 aa4.92□□□□□ -1.62
CHUK-202ENST00000585551 CPSF6Q16630 551 aaKnown RBP eCLIP4.92□□□□□ -1.62
CHUK-202ENST00000585551 HP1BP3Q5SSJ5 553 aaPredicted RBP4.92□□□□□ -1.62
CHUK-202ENST00000585551 LCE3BQ5TA77 95 aa4.92□□□□□ -1.62
CHUK-202ENST00000585551 C1orf127Q8N9H9 656 aa4.92□□□□□ -1.62
CHUK-202ENST00000585551 TMEM102Q8N9M5 508 aaPredicted RBP4.92□□□□□ -1.62
CHUK-202ENST00000585551 SHKBP1Q8TBC3 707 aa4.92□□□□□ -1.62
CHUK-202ENST00000585551 FOXD4L4Q8WXT5 416 aaPredicted RBP4.92□□□□□ -1.62
CHUK-202ENST00000585551 ARID3AQ99856 593 aa4.92□□□□□ -1.62
CHUK-202ENST00000585551 ZFYVE1Q9HBF4 777 aa4.92□□□□□ -1.62
CHUK-202ENST00000585551 SEPT3Q9UH03 358 aa4.92□□□□□ -1.62
CHUK-202ENST00000585551 ANGEL1Q9UNK9 670 aaKnown RBP4.92□□□□□ -1.62
CHUK-202ENST00000585551 WDR64B1ANS9 1081 aa4.91□□□□□ -1.62
CHUK-202ENST00000585551 ADAM11O75078 769 aa4.91□□□□□ -1.62
CHUK-202ENST00000585551 PHACTR2O75167 634 aa4.91□□□□□ -1.62
CHUK-202ENST00000585551 MED26O95402 600 aa4.91□□□□□ -1.62
CHUK-202ENST00000585551 PDGFAP04085 211 aa4.91□□□□□ -1.62
CHUK-202ENST00000585551 TAL1P17542 331 aaPredicted RBP4.91□□□□□ -1.62
CHUK-202ENST00000585551 MAP4P27816 1152 aaKnown RBP4.91□□□□□ -1.62
CHUK-202ENST00000585551 PAOXQ6QHF9 649 aa4.91□□□□□ -1.62
CHUK-202ENST00000585551 DTX1Q86Y01 620 aa4.91□□□□□ -1.62
CHUK-202ENST00000585551 KRTAP1-3Q8IUG1 177 aa4.91□□□□□ -1.62
CHUK-202ENST00000585551 OSMRQ99650 979 aa4.91□□□□□ -1.62
CHUK-202ENST00000585551 OSBPL1AQ9BXW6 950 aa4.91□□□□□ -1.62
CHUK-202ENST00000585551 PIM2Q9P1W9 311 aa4.91□□□□□ -1.62
CHUK-202ENST00000585551 RNF114Q9Y508 228 aa4.91□□□□□ -1.62
CHUK-202ENST00000585551 OAS3Q9Y6K5 1087 aaKnown RBP4.91□□□□□ -1.62
CHUK-202ENST00000585551 FAM13AO94988 1023 aa4.9□□□□□ -1.63
CHUK-202ENST00000585551 SPINK2P20155 84 aa4.9□□□□□ -1.63
CHUK-202ENST00000585551 EIF1AXP47813 144 aaKnown RBP4.9□□□□□ -1.63
CHUK-202ENST00000585551 PREPP48147 710 aa4.9□□□□□ -1.63
CHUK-202ENST00000585551 ATCAYQ86WG3 371 aa4.9□□□□□ -1.63
CHUK-202ENST00000585551 SMG8Q8ND04 991 aaKnown RBP4.9□□□□□ -1.63
CHUK-202ENST00000585551 DDX54Q8TDD1 881 aaKnown RBP4.9□□□□□ -1.63
CHUK-202ENST00000585551 NXPE3Q969Y0 559 aa4.9□□□□□ -1.63
CHUK-202ENST00000585551 FMNL2Q96PY5 1086 aa4.9□□□□□ -1.63
CHUK-202ENST00000585551 METTL22Q9BUU2 404 aaPredicted RBP4.9□□□□□ -1.63
CHUK-202ENST00000585551 USP26Q9BXU7 913 aa4.9□□□□□ -1.63
CHUK-202ENST00000585551 SOX17Q9H6I2 414 aaPredicted RBP4.9□□□□□ -1.63
CHUK-202ENST00000585551 SOX13Q9UN79 622 aa4.9□□□□□ -1.63
CHUK-202ENST00000585551 FAM95CA0A1B0GW59 222 aa4.89□□□□□ -1.63
CHUK-202ENST00000585551 PRR19A6NJB7 356 aa4.89□□□□□ -1.63
CHUK-202ENST00000585551 NFKBIEO00221 500 aa4.89□□□□□ -1.63
CHUK-202ENST00000585551 TM4SF5O14894 197 aa4.89□□□□□ -1.63
CHUK-202ENST00000585551 NFKBIBQ15653 356 aa4.89□□□□□ -1.63
CHUK-202ENST00000585551 EXOSC6Q5RKV6 272 aaKnown RBP4.89□□□□□ -1.63
CHUK-202ENST00000585551 CCDC82Q8N4S0 544 aa4.89□□□□□ -1.63
CHUK-202ENST00000585551 ASAP3Q8TDY4 903 aa4.89□□□□□ -1.63
CHUK-202ENST00000585551 SNX29Q8TEQ0 813 aa4.89□□□□□ -1.63
CHUK-202ENST00000585551 GTF3C2Q8WUA4 911 aaPredicted RBP4.89□□□□□ -1.63
CHUK-202ENST00000585551 MFSD14AQ96MC6 490 aa4.89□□□□□ -1.63
CHUK-202ENST00000585551 KRTAP4-12Q9BQ66 201 aa4.89□□□□□ -1.63
CHUK-202ENST00000585551 GGNBP2Q9H3C7 697 aa4.89□□□□□ -1.63
CHUK-202ENST00000585551 SUGCTQ9HAC7 445 aa4.89□□□□□ -1.63
CHUK-202ENST00000585551 SOX1O00570 391 aaPredicted RBP4.88□□□□□ -1.63
CHUK-202ENST00000585551 PPP1R15AO75807 674 aaPredicted RBP4.88□□□□□ -1.63
CHUK-202ENST00000585551 NEFLP07196 543 aa4.88□□□□□ -1.63
CHUK-202ENST00000585551 MPSTP25325 297 aa4.88□□□□□ -1.63
CHUK-202ENST00000585551 SF3B2Q13435 895 aaKnown RBP4.88□□□□□ -1.63
CHUK-202ENST00000585551 FBXL6Q8N531 539 aa4.88□□□□□ -1.63
CHUK-202ENST00000585551 AMOTL2Q9Y2J4 779 aa4.88□□□□□ -1.63
CHUK-202ENST00000585551 TNFRSF21O75509 655 aa4.87□□□□□ -1.63
CHUK-202ENST00000585551 FOSL1P15407 271 aa4.87□□□□□ -1.63
CHUK-202ENST00000585551 CYP27A1Q02318 531 aa4.87□□□□□ -1.63
CHUK-202ENST00000585551 GSTM4Q03013 218 aa4.87□□□□□ -1.63
CHUK-202ENST00000585551 DUSP27Q5VZP5 1158 aa4.87□□□□□ -1.63
CHUK-202ENST00000585551 ADAMTSL4Q6UY14 1074 aa4.87□□□□□ -1.63
CHUK-202ENST00000585551 FBXL18Q96ME1 805 aa4.87□□□□□ -1.63
CHUK-202ENST00000585551 ZKSCAN3Q9BRR0 538 aa4.87□□□□□ -1.63
CHUK-202ENST00000585551 TMPRSS13Q9BYE2 586 aa4.87□□□□□ -1.63
CHUK-202ENST00000585551 POLIQ9UNA4 740 aa4.87□□□□□ -1.63
CHUK-202ENST00000585551 LOC100289279A0A1B0GTE1 492 aa4.86□□□□□ -1.63
CHUK-202ENST00000585551 TRPA1O75762 1119 aa4.86□□□□□ -1.63
CHUK-202ENST00000585551 CYP11A1P05108 521 aa4.86□□□□□ -1.63
CHUK-202ENST00000585551 ACPPP15309 386 aa4.86□□□□□ -1.63
CHUK-202ENST00000585551 HNRNPUQ00839 825 aaKnown RBP eCLIP4.86□□□□□ -1.63
CHUK-202ENST00000585551 FKBP4Q02790 459 aaKnown RBP eCLIP4.86□□□□□ -1.63
CHUK-202ENST00000585551 SGO2Q562F6 1265 aa4.86□□□□□ -1.63
CHUK-202ENST00000585551 BHLHE41Q9C0J9 482 aaPredicted RBP4.86□□□□□ -1.63
CHUK-202ENST00000585551 CHRDQ9H2X0 955 aa4.86□□□□□ -1.63
CHUK-202ENST00000585551 RAD18Q9NS91 495 aa4.86□□□□□ -1.63
CHUK-202ENST00000585551 A6NHS1 94 aa4.85□□□□□ -1.63
CHUK-202ENST00000585551 EREGO14944 169 aa4.85□□□□□ -1.63
CHUK-202ENST00000585551 CYP26A1O43174 497 aa4.85□□□□□ -1.63
CHUK-202ENST00000585551 TIAF1O95411 115 aa4.85□□□□□ -1.63
CHUK-202ENST00000585551 ESRRAP11474 423 aaPredicted RBP4.85□□□□□ -1.63
CHUK-202ENST00000585551 SOX4Q06945 474 aaPredicted RBP4.85□□□□□ -1.63
CHUK-202ENST00000585551 MAP7Q14244 749 aa4.85□□□□□ -1.63
CHUK-202ENST00000585551 VN1R5Q7Z5H4 357 aa4.85□□□□□ -1.63
CHUK-202ENST00000585551 VSIG10LQ86VR7 867 aa4.85□□□□□ -1.63
CHUK-202ENST00000585551 TP53INP2Q8IXH6 220 aa4.85□□□□□ -1.63
CHUK-202ENST00000585551 HHIPQ96QV1 700 aa4.85□□□□□ -1.63
CHUK-202ENST00000585551 F13BP05160 661 aa4.84□□□□□ -1.63
CHUK-202ENST00000585551 NPR3P17342 541 aa4.84□□□□□ -1.63
CHUK-202ENST00000585551 SSFA2P28290 1259 aa4.84□□□□□ -1.63
CHUK-202ENST00000585551 B4GALNT3Q6L9W6 998 aa4.84□□□□□ -1.63
CHUK-202ENST00000585551 AGBL5Q8NDL9 886 aa4.84□□□□□ -1.63
CHUK-202ENST00000585551 FBLIM1Q8WUP2 373 aa4.84□□□□□ -1.63
CHUK-202ENST00000585551 ASIC4Q96FT7 647 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms