RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 EHHADHQ08426 723 aa6.06□□□□□ -1.44
VAPA-208ENST00000584796 C19orf57Q0VDD7 668 aa6.06□□□□□ -1.44
VAPA-208ENST00000584796 HGSNATQ68CP4 663 aa6.06□□□□□ -1.44
VAPA-208ENST00000584796 MCTP1Q6DN14 999 aa6.06□□□□□ -1.44
VAPA-208ENST00000584796 SLC7A3Q8WY07 619 aa6.06□□□□□ -1.44
VAPA-208ENST00000584796 FAM83CQ9BQN1 747 aa6.06□□□□□ -1.44
VAPA-208ENST00000584796 RUSC1Q9BVN2 902 aa6.06□□□□□ -1.44
VAPA-208ENST00000584796 BHLHE41Q9C0J9 482 aaPredicted RBP6.06□□□□□ -1.44
VAPA-208ENST00000584796 PRR19A6NJB7 356 aa6.05□□□□□ -1.44
VAPA-208ENST00000584796 SOX1O00570 391 aaPredicted RBP6.05□□□□□ -1.44
VAPA-208ENST00000584796 SART1O43290 800 aaKnown RBP6.05□□□□□ -1.44
VAPA-208ENST00000584796 BMP3P12645 472 aa6.05□□□□□ -1.44
VAPA-208ENST00000584796 SPINK2P20155 84 aa6.05□□□□□ -1.44
VAPA-208ENST00000584796 ARL4DP49703 201 aa6.05□□□□□ -1.44
VAPA-208ENST00000584796 SF3B2Q13435 895 aaKnown RBP6.05□□□□□ -1.44
VAPA-208ENST00000584796 PEAR1Q5VY43 1037 aaPredicted RBP6.05□□□□□ -1.44
VAPA-208ENST00000584796 FDX2Q6P4F2 183 aa6.05□□□□□ -1.44
VAPA-208ENST00000584796 GJD3Q8N144 294 aa6.05□□□□□ -1.44
VAPA-208ENST00000584796 SOX17Q9H6I2 414 aaPredicted RBP6.05□□□□□ -1.44
VAPA-208ENST00000584796 FOXD3Q9UJU5 478 aaPredicted RBP6.05□□□□□ -1.44
VAPA-208ENST00000584796 IKBKEQ14164 716 aa6.04□□□□□ -1.44
VAPA-208ENST00000584796 INTS5Q6P9B9 1019 aaKnown RBP6.04□□□□□ -1.44
VAPA-208ENST00000584796 BEND4Q6ZU67 534 aa6.04□□□□□ -1.44
VAPA-208ENST00000584796 TMPRSS13Q9BYE2 586 aa6.04□□□□□ -1.44
VAPA-208ENST00000584796 C1orf115Q9H7X2 142 aa6.04□□□□□ -1.44
VAPA-208ENST00000584796 COL17A1Q9UMD9 1497 aaPredicted RBP6.03□□□□□ -1.44
VAPA-208ENST00000584796 TIAF1O95411 115 aa6.03□□□□□ -1.44
VAPA-208ENST00000584796 GRIK1P39086 918 aa6.03□□□□□ -1.44
VAPA-208ENST00000584796 FKBP4Q02790 459 aaKnown RBP eCLIP6.03□□□□□ -1.44
VAPA-208ENST00000584796 SMG8Q8ND04 991 aaKnown RBP6.03□□□□□ -1.44
VAPA-208ENST00000584796 SUGCTQ9HAC7 445 aa6.03□□□□□ -1.44
VAPA-208ENST00000584796 LATS2Q9NRM7 1088 aa6.03□□□□□ -1.44
VAPA-208ENST00000584796 MTMR7Q9Y216 660 aa6.03□□□□□ -1.44
VAPA-208ENST00000584796 AMOTL2Q9Y2J4 779 aa6.03□□□□□ -1.44
VAPA-208ENST00000584796 LOC100289279A0A1B0GTE1 492 aa6.02□□□□□ -1.45
VAPA-208ENST00000584796 ESRRAP11474 423 aaPredicted RBP6.02□□□□□ -1.45
VAPA-208ENST00000584796 AAMPQ13685 434 aa6.02□□□□□ -1.45
VAPA-208ENST00000584796 DTX1Q86Y01 620 aa6.02□□□□□ -1.45
VAPA-208ENST00000584796 KRTAP1-3Q8IUG1 177 aa6.02□□□□□ -1.45
VAPA-208ENST00000584796 SHKBP1Q8TBC3 707 aa6.02□□□□□ -1.45
VAPA-208ENST00000584796 KCNF1Q9H3M0 494 aa6.02□□□□□ -1.45
VAPA-208ENST00000584796 CCDC87Q9NVE4 849 aa6.02□□□□□ -1.45
VAPA-208ENST00000584796 GTF3C3Q9Y5Q9 886 aa6.02□□□□□ -1.45
VAPA-208ENST00000584796 ADAMTS4O75173 837 aa6.01□□□□□ -1.45
VAPA-208ENST00000584796 DLGAP3O95886 979 aa6.01□□□□□ -1.45
VAPA-208ENST00000584796 MAP4P27816 1152 aaKnown RBP6.01□□□□□ -1.45
VAPA-208ENST00000584796 GP2P55259 537 aaKnown RBP6.01□□□□□ -1.45
VAPA-208ENST00000584796 NUTM2GQ5VZR2 741 aa6.01□□□□□ -1.45
VAPA-208ENST00000584796 ASAP3Q8TDY4 903 aa6.01□□□□□ -1.45
VAPA-208ENST00000584796 USP26Q9BXU7 913 aa6.01□□□□□ -1.45
VAPA-208ENST00000584796 NRSN2Q9GZP1 204 aa6.01□□□□□ -1.45
VAPA-208ENST00000584796 ZFYVE28Q9HCC9 887 aa6.01□□□□□ -1.45
VAPA-208ENST00000584796 OAS3Q9Y6K5 1087 aaKnown RBP6.01□□□□□ -1.45
VAPA-208ENST00000584796 CARNS1A5YM72 827 aa6□□□□□ -1.45
VAPA-208ENST00000584796 GAS2O43903 313 aaKnown RBP6□□□□□ -1.45
VAPA-208ENST00000584796 ZNF211Q13398 564 aaPredicted RBP6□□□□□ -1.45
VAPA-208ENST00000584796 SGO2Q562F6 1265 aa6□□□□□ -1.45
VAPA-208ENST00000584796 KRTAP19-1Q8IUB9 90 aa6□□□□□ -1.45
VAPA-208ENST00000584796 CYP4F12Q9HCS2 524 aa6□□□□□ -1.45
VAPA-208ENST00000584796 METTL12A8MUP2 240 aa5.99□□□□□ -1.45
VAPA-208ENST00000584796 EIF4EBP3O60516 100 aaPredicted RBP5.99□□□□□ -1.45
VAPA-208ENST00000584796 ABL1P00519 1130 aa5.99□□□□□ -1.45
VAPA-208ENST00000584796 LCE3BQ5TA77 95 aa5.99□□□□□ -1.45
VAPA-208ENST00000584796 CCNJLQ8IV13 435 aa5.99□□□□□ -1.45
VAPA-208ENST00000584796 C12orf50Q8NA57 414 aaPredicted RBP5.99□□□□□ -1.45
VAPA-208ENST00000584796 ANO2Q9NQ90 1003 aa5.99□□□□□ -1.45
VAPA-208ENST00000584796 EGFL7Q9UHF1 273 aa5.99□□□□□ -1.45
VAPA-208ENST00000584796 WDR64B1ANS9 1081 aa5.98□□□□□ -1.45
VAPA-208ENST00000584796 IRAK1P51617 712 aa5.98□□□□□ -1.45
VAPA-208ENST00000584796 EXOSC6Q5RKV6 272 aaKnown RBP5.98□□□□□ -1.45
VAPA-208ENST00000584796 GALNT12Q8IXK2 581 aa5.98□□□□□ -1.45
VAPA-208ENST00000584796 MFSD14AQ96MC6 490 aa5.98□□□□□ -1.45
VAPA-208ENST00000584796 USTQ9Y2C2 406 aa5.98□□□□□ -1.45
VAPA-208ENST00000584796 A0A1W2PP55 124 aa5.97□□□□□ -1.45
VAPA-208ENST00000584796 ICMTO60725 284 aa5.97□□□□□ -1.45
VAPA-208ENST00000584796 POLR3DP05423 398 aaPredicted RBP5.97□□□□□ -1.45
VAPA-208ENST00000584796 HOXA10P31260 410 aaPredicted RBP5.97□□□□□ -1.45
VAPA-208ENST00000584796 GSTM4Q03013 218 aa5.97□□□□□ -1.45
VAPA-208ENST00000584796 ECM1Q16610 540 aa5.97□□□□□ -1.45
VAPA-208ENST00000584796 CPSF6Q16630 551 aaKnown RBP eCLIP5.97□□□□□ -1.45
VAPA-208ENST00000584796 C2CD4AQ8NCU7 369 aaPredicted RBP5.97□□□□□ -1.45
VAPA-208ENST00000584796 FMNL2Q96PY5 1086 aa5.97□□□□□ -1.45
VAPA-208ENST00000584796 TCF12Q99081 682 aa5.97□□□□□ -1.45
VAPA-208ENST00000584796 CLEC4MQ9H2X3 399 aaPredicted RBP5.97□□□□□ -1.45
VAPA-208ENST00000584796 PIM2Q9P1W9 311 aa5.97□□□□□ -1.45
VAPA-208ENST00000584796 A0A096LPE4 126 aa5.96□□□□□ -1.46
VAPA-208ENST00000584796 FAM95CA0A1B0GW59 222 aa5.96□□□□□ -1.46
VAPA-208ENST00000584796 A0A1W2PPZ6 126 aa5.96□□□□□ -1.46
VAPA-208ENST00000584796 WNT11O96014 354 aa5.96□□□□□ -1.46
VAPA-208ENST00000584796 F13BP05160 661 aa5.96□□□□□ -1.46
VAPA-208ENST00000584796 DRD2P14416 443 aa5.96□□□□□ -1.46
VAPA-208ENST00000584796 RXRBP28702 533 aa5.96□□□□□ -1.46
VAPA-208ENST00000584796 GRIA4P48058 902 aa5.96□□□□□ -1.46
VAPA-208ENST00000584796 PCDH1Q08174 1060 aa5.96□□□□□ -1.46
VAPA-208ENST00000584796 ZNF423Q2M1K9 1284 aa5.96□□□□□ -1.46
VAPA-208ENST00000584796 CDPF1Q6NVV7 123 aa5.96□□□□□ -1.46
VAPA-208ENST00000584796 GIMAP7Q8NHV1 300 aa5.96□□□□□ -1.46
VAPA-208ENST00000584796 EZH1Q92800 747 aaPredicted RBP5.96□□□□□ -1.46
VAPA-208ENST00000584796 GOLGA2P5Q9HBQ8 144 aa5.96□□□□□ -1.46
VAPA-208ENST00000584796 PAX4O43316 350 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms