RNA–Protein interactions for RNA: ENST00000584746.5

CUEDC1-212, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 2,870 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-212ENST00000584746 TOMM22Q9NS69 142 aa21.09■□□□□ 0.97
CUEDC1-212ENST00000584746 SPATA31A3Q5VYP0 1347 aa21.09■□□□□ 0.97
CUEDC1-212ENST00000584746 TPD52L1Q16890 204 aaPredicted RBP21.08■□□□□ 0.97
CUEDC1-212ENST00000584746 HELLSQ9NRZ9 838 aa21.08■□□□□ 0.97
CUEDC1-212ENST00000584746 TMOD3Q9NYL9 352 aa21.08■□□□□ 0.97
CUEDC1-212ENST00000584746 JCADQ9P266 1359 aa21.08■□□□□ 0.97
CUEDC1-212ENST00000584746 ATP2B1P20020 1258 aa21.08■□□□□ 0.96
CUEDC1-212ENST00000584746 IFIT5Q13325 482 aaKnown RBP21.08■□□□□ 0.96
CUEDC1-212ENST00000584746 STK38Q15208 465 aa21.08■□□□□ 0.96
CUEDC1-212ENST00000584746 C8orf76Q96K31 380 aa21.08■□□□□ 0.96
CUEDC1-212ENST00000584746 TRPM3Q9HCF6 1732 aaPredicted RBP21.08■□□□□ 0.96
CUEDC1-212ENST00000584746 ANTXR2P58335 489 aa21.07■□□□□ 0.96
CUEDC1-212ENST00000584746 RRP12Q5JTH9 1297 aaKnown RBP21.07■□□□□ 0.96
CUEDC1-212ENST00000584746 PPP4R3BQ5MIZ7 849 aa21.07■□□□□ 0.96
CUEDC1-212ENST00000584746 ITGA6P23229 1130 aa21.07■□□□□ 0.96
CUEDC1-212ENST00000584746 GOLGA8FQ08AF8 430 aa21.07■□□□□ 0.96
CUEDC1-212ENST00000584746 GOLGA8DPQ0D2H9 430 aa21.07■□□□□ 0.96
CUEDC1-212ENST00000584746 DPCR1Q3MIW9 517 aa21.07■□□□□ 0.96
CUEDC1-212ENST00000584746 PIGBQ92521 554 aa21.07■□□□□ 0.96
CUEDC1-212ENST00000584746 ARFGEF2Q9Y6D5 1785 aa21.07■□□□□ 0.96
CUEDC1-212ENST00000584746 OVOS2A0A0G2JMS6 1433 aa21.07■□□□□ 0.96
CUEDC1-212ENST00000584746 B4E1Z4 1266 aa21.07■□□□□ 0.96
CUEDC1-212ENST00000584746 IL2RBP14784 551 aa21.07■□□□□ 0.96
CUEDC1-212ENST00000584746 CCDC191Q8NCU4 936 aa21.07■□□□□ 0.96
CUEDC1-212ENST00000584746 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.07■□□□□ 0.96
CUEDC1-212ENST00000584746 SMIM22K7EJ46 135 aa21.06■□□□□ 0.96
CUEDC1-212ENST00000584746 RALYLQ86SE5 291 aaKnown RBP21.06■□□□□ 0.96
CUEDC1-212ENST00000584746 DSCC1Q9BVC3 393 aa21.06■□□□□ 0.96
CUEDC1-212ENST00000584746 ZSCAN16Q9H4T2 348 aaPredicted RBP21.06■□□□□ 0.96
CUEDC1-212ENST00000584746 SPTLC3Q9NUV7 552 aa21.06■□□□□ 0.96
CUEDC1-212ENST00000584746 PCDH11XQ9BZA7 1347 aa21.06■□□□□ 0.96
CUEDC1-212ENST00000584746 PCDH11YQ9BZA8 1340 aa21.06■□□□□ 0.96
CUEDC1-212ENST00000584746 IMMTQ16891 758 aaKnown RBP21.06■□□□□ 0.96
CUEDC1-212ENST00000584746 WTIPA6NIX2 430 aaPredicted RBP21.05■□□□□ 0.96
CUEDC1-212ENST00000584746 TNNT1P13805 278 aa21.05■□□□□ 0.96
CUEDC1-212ENST00000584746 PHKA1P46020 1223 aa21.05■□□□□ 0.96
CUEDC1-212ENST00000584746 IQCB1Q15051 598 aa21.05■□□□□ 0.96
CUEDC1-212ENST00000584746 SMIM5Q71RC9 77 aa21.05■□□□□ 0.96
CUEDC1-212ENST00000584746 PLA2G4DQ86XP0 818 aa21.05■□□□□ 0.96
CUEDC1-212ENST00000584746 ZNF213O14771 459 aa21.05■□□□□ 0.96
CUEDC1-212ENST00000584746 U2AF2P26368 475 aaKnown RBP eCLIP21.05■□□□□ 0.96
CUEDC1-212ENST00000584746 ATP2B3Q16720 1220 aa21.05■□□□□ 0.96
CUEDC1-212ENST00000584746 CADPS2Q86UW7 1296 aa21.05■□□□□ 0.96
CUEDC1-212ENST00000584746 WWC3Q9ULE0 1092 aa21.05■□□□□ 0.96
CUEDC1-212ENST00000584746 CTDSPL2Q05D32 466 aa21.04■□□□□ 0.96
CUEDC1-212ENST00000584746 TCIRG1Q13488 830 aa21.04■□□□□ 0.96
CUEDC1-212ENST00000584746 CYB5R4Q7L1T6 521 aa21.04■□□□□ 0.96
CUEDC1-212ENST00000584746 TBC1D10CQ8IV04 446 aa21.04■□□□□ 0.96
CUEDC1-212ENST00000584746 ZBTB9Q96C00 473 aa21.04■□□□□ 0.96
CUEDC1-212ENST00000584746 CLIC6Q96NY7 704 aa21.04■□□□□ 0.96
CUEDC1-212ENST00000584746 PIH1D3Q9NQM4 214 aaKnown RBP21.04■□□□□ 0.96
CUEDC1-212ENST00000584746 HPS5Q9UPZ3 1129 aa21.04■□□□□ 0.96
CUEDC1-212ENST00000584746 LAMA4Q16363 1823 aa21.04■□□□□ 0.96
CUEDC1-212ENST00000584746 SMC2O95347 1197 aa21.04■□□□□ 0.96
CUEDC1-212ENST00000584746 CHAF1AQ13111 956 aaPredicted RBP21.04■□□□□ 0.96
CUEDC1-212ENST00000584746 DHX40Q8IX18 779 aaKnown RBP21.04■□□□□ 0.96
CUEDC1-212ENST00000584746 TRMT112Q9UI30 125 aaKnown RBP21.04■□□□□ 0.96
CUEDC1-212ENST00000584746 RCOR1Q9UKL0 485 aa21.04■□□□□ 0.96
CUEDC1-212ENST00000584746 ALDH8A1Q9H2A2 487 aaPredicted RBP21.03■□□□□ 0.96
CUEDC1-212ENST00000584746 WDR17Q8IZU2 1322 aa21.03■□□□□ 0.96
CUEDC1-212ENST00000584746 TERF1P54274 439 aa21.03■□□□□ 0.96
CUEDC1-212ENST00000584746 NBPF3Q9H094 633 aa21.03■□□□□ 0.96
CUEDC1-212ENST00000584746 HMGB1P09429 215 aaKnown RBP21.03■□□□□ 0.96
CUEDC1-212ENST00000584746 KIF6Q6ZMV9 814 aa21.03■□□□□ 0.96
CUEDC1-212ENST00000584746 TDRD7Q8NHU6 1098 aaKnown RBP21.03■□□□□ 0.96
CUEDC1-212ENST00000584746 GNL2Q13823 731 aaKnown RBP21.02■□□□□ 0.96
CUEDC1-212ENST00000584746 ZBTB1Q9Y2K1 713 aa21.02■□□□□ 0.96
CUEDC1-212ENST00000584746 hCG_1642624A0A1W2PR95 340 aa21.02■□□□□ 0.95
CUEDC1-212ENST00000584746 LMOD1P29536 600 aaPredicted RBP21.02■□□□□ 0.95
CUEDC1-212ENST00000584746 NFXL1Q6ZNB6 911 aa21.02■□□□□ 0.95
CUEDC1-212ENST00000584746 TNS3Q68CZ2 1445 aa21.01■□□□□ 0.95
CUEDC1-212ENST00000584746 PRKAB2O43741 272 aa21.01■□□□□ 0.95
CUEDC1-212ENST00000584746 FAM160A1Q05DH4 1040 aa21.01■□□□□ 0.95
CUEDC1-212ENST00000584746 MIGA1Q8NAN2 632 aa21.01■□□□□ 0.95
CUEDC1-212ENST00000584746 CAMTA1Q9Y6Y1 1673 aa21.01■□□□□ 0.95
CUEDC1-212ENST00000584746 SKILP12757 684 aa21.01■□□□□ 0.95
CUEDC1-212ENST00000584746 CDC27P30260 824 aa21.01■□□□□ 0.95
CUEDC1-212ENST00000584746 KCNQ4P56696 695 aa21.01■□□□□ 0.95
CUEDC1-212ENST00000584746 HMGN5P82970 282 aaKnown RBP21.01■□□□□ 0.95
CUEDC1-212ENST00000584746 STX1AQ16623 288 aa21.01■□□□□ 0.95
CUEDC1-212ENST00000584746 SLC4A8Q2Y0W8 1093 aa21.01■□□□□ 0.95
CUEDC1-212ENST00000584746 TMX1Q9H3N1 280 aa21.01■□□□□ 0.95
CUEDC1-212ENST00000584746 MRC1P22897 1456 aa21■□□□□ 0.95
CUEDC1-212ENST00000584746 SLC4A9Q96Q91 983 aa21■□□□□ 0.95
CUEDC1-212ENST00000584746 ZNF532Q9HCE3 1301 aa21■□□□□ 0.95
CUEDC1-212ENST00000584746 PHRF1Q9P1Y6 1649 aaKnown RBP21■□□□□ 0.95
CUEDC1-212ENST00000584746 WDHD1O75717 1129 aaPredicted RBP21■□□□□ 0.95
CUEDC1-212ENST00000584746 ZRSR1Q15695 479 aaKnown RBP21■□□□□ 0.95
CUEDC1-212ENST00000584746 NAA16Q6N069 864 aaPredicted RBP21■□□□□ 0.95
CUEDC1-212ENST00000584746 RBM43Q6ZSC3 357 aaKnown RBP21■□□□□ 0.95
CUEDC1-212ENST00000584746 ENGASEQ8NFI3 743 aa21■□□□□ 0.95
CUEDC1-212ENST00000584746 MRPS27Q92552 414 aaKnown RBP21■□□□□ 0.95
CUEDC1-212ENST00000584746 ZNF396Q96N95 335 aaPredicted RBP21■□□□□ 0.95
CUEDC1-212ENST00000584746 BTG4Q9NY30 223 aa21■□□□□ 0.95
CUEDC1-212ENST00000584746 UTRNP46939 3433 aa21■□□□□ 0.95
CUEDC1-212ENST00000584746 CCDC69A6NI79 296 aa20.99■□□□□ 0.95
CUEDC1-212ENST00000584746 ATP1A3P13637 1013 aa20.99■□□□□ 0.95
CUEDC1-212ENST00000584746 SYNE3Q6ZMZ3 975 aa20.99■□□□□ 0.95
CUEDC1-212ENST00000584746 ACSBG1Q96GR2 724 aa20.99■□□□□ 0.95
CUEDC1-212ENST00000584746 SEC31BQ9NQW1 1179 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms