RNA–Protein interactions for RNA: ENST00000584558.5

ITGB4-212, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-212ENST00000584558 CCAR2Q8N163 923 aaKnown RBP14.85□□□□□ -0.03
ITGB4-212ENST00000584558 ISCA1Q9BUE6 129 aa14.85□□□□□ -0.03
ITGB4-212ENST00000584558 ECHDC1Q9NTX5 307 aa14.85□□□□□ -0.03
ITGB4-212ENST00000584558 CWC25Q9NXE8 425 aaPredicted RBP14.85□□□□□ -0.03
ITGB4-212ENST00000584558 SNX14Q9Y5W7 946 aa14.85□□□□□ -0.03
ITGB4-212ENST00000584558 SPATA31A5Q5VU36 1347 aa14.85□□□□□ -0.03
ITGB4-212ENST00000584558 SPATA31A7Q8IWB4 1347 aa14.85□□□□□ -0.03
ITGB4-212ENST00000584558 GTF2A1P52655 376 aaPredicted RBP14.84□□□□□ -0.03
ITGB4-212ENST00000584558 PTF1AQ7RTS3 328 aa14.84□□□□□ -0.03
ITGB4-212ENST00000584558 ZBTB3Q9H5J0 574 aa14.84□□□□□ -0.03
ITGB4-212ENST00000584558 TMCO3Q6UWJ1 677 aa14.84□□□□□ -0.03
ITGB4-212ENST00000584558 TTC14Q96N46 770 aa14.84□□□□□ -0.03
ITGB4-212ENST00000584558 ANKRD36CQ5JPF3 1778 aa14.84□□□□□ -0.03
ITGB4-212ENST00000584558 NOP2P46087 812 aaKnown RBP14.83□□□□□ -0.03
ITGB4-212ENST00000584558 ZSCAN26Q16670 478 aa14.83□□□□□ -0.03
ITGB4-212ENST00000584558 MUM1L1Q5H9M0 696 aa14.83□□□□□ -0.03
ITGB4-212ENST00000584558 AACSQ86V21 672 aa14.83□□□□□ -0.03
ITGB4-212ENST00000584558 RASEFQ8IZ41 740 aa14.83□□□□□ -0.03
ITGB4-212ENST00000584558 ZCCHC17Q9NP64 241 aaKnown RBP14.83□□□□□ -0.03
ITGB4-212ENST00000584558 EPB41L2O43491 1005 aaKnown RBP14.83□□□□□ -0.04
ITGB4-212ENST00000584558 NEMFO60524 1076 aa14.83□□□□□ -0.04
ITGB4-212ENST00000584558 CASTP20810 708 aaKnown RBP14.83□□□□□ -0.04
ITGB4-212ENST00000584558 SNW1Q13573 536 aaKnown RBP14.83□□□□□ -0.04
ITGB4-212ENST00000584558 SIL1Q9H173 461 aa14.83□□□□□ -0.04
ITGB4-212ENST00000584558 RREB1Q92766 1687 aa14.83□□□□□ -0.04
ITGB4-212ENST00000584558 IFIT2P09913 472 aaKnown RBP14.83□□□□□ -0.04
ITGB4-212ENST00000584558 CYP19A1P11511 503 aaPredicted RBP14.83□□□□□ -0.04
ITGB4-212ENST00000584558 CNTROBQ8N137 903 aa14.83□□□□□ -0.04
ITGB4-212ENST00000584558 TFIP11Q9UBB9 837 aaKnown RBP14.83□□□□□ -0.04
ITGB4-212ENST00000584558 CCZ1BP86790 482 aa14.82□□□□□ -0.04
ITGB4-212ENST00000584558 CCZ1P86791 482 aaPredicted RBP14.82□□□□□ -0.04
ITGB4-212ENST00000584558 GPS2Q13227 327 aa14.82□□□□□ -0.04
ITGB4-212ENST00000584558 ARGLU1Q9NWB6 273 aaPredicted RBP14.82□□□□□ -0.04
ITGB4-212ENST00000584558 TLR7Q9NYK1 1049 aaKnown RBP14.82□□□□□ -0.04
ITGB4-212ENST00000584558 SEC31AO94979 1220 aaKnown RBP14.82□□□□□ -0.04
ITGB4-212ENST00000584558 CDC25BP30305 580 aa14.82□□□□□ -0.04
ITGB4-212ENST00000584558 CASQ1P31415 396 aa14.82□□□□□ -0.04
ITGB4-212ENST00000584558 TRIM28Q13263 835 aaKnown RBP14.82□□□□□ -0.04
ITGB4-212ENST00000584558 TCIRG1Q13488 830 aa14.82□□□□□ -0.04
ITGB4-212ENST00000584558 BARGINQ6ZT62 677 aa14.82□□□□□ -0.04
ITGB4-212ENST00000584558 BICD2Q8TD16 824 aa14.82□□□□□ -0.04
ITGB4-212ENST00000584558 UTRNP46939 3433 aa14.81□□□□□ -0.04
ITGB4-212ENST00000584558 STARD3NLO95772 234 aa14.81□□□□□ -0.04
ITGB4-212ENST00000584558 CHRM1P11229 460 aaPredicted RBP14.81□□□□□ -0.04
ITGB4-212ENST00000584558 ACSBG1Q96GR2 724 aa14.81□□□□□ -0.04
ITGB4-212ENST00000584558 YY1AP1Q9H869 796 aa14.81□□□□□ -0.04
ITGB4-212ENST00000584558 LOC102724159A0A0B4J2E5 919 aa14.81□□□□□ -0.04
ITGB4-212ENST00000584558 SGSM2O43147 1006 aa14.81□□□□□ -0.04
ITGB4-212ENST00000584558 PWP2Q15269 919 aaKnown RBP14.81□□□□□ -0.04
ITGB4-212ENST00000584558 LARP1BQ659C4 914 aaKnown RBP14.81□□□□□ -0.04
ITGB4-212ENST00000584558 POTEAQ6S8J7 498 aa14.81□□□□□ -0.04
ITGB4-212ENST00000584558 LMBR1LQ6UX01 489 aa14.81□□□□□ -0.04
ITGB4-212ENST00000584558 CDC37L1Q7L3B6 337 aa14.81□□□□□ -0.04
ITGB4-212ENST00000584558 NECAB1Q8N987 351 aa14.81□□□□□ -0.04
ITGB4-212ENST00000584558 SPATA32Q96LK8 384 aa14.81□□□□□ -0.04
ITGB4-212ENST00000584558 DDX19AQ9NUU7 478 aaKnown RBP14.81□□□□□ -0.04
ITGB4-212ENST00000584558 NR1I2O75469 434 aa14.8□□□□□ -0.04
ITGB4-212ENST00000584558 OAS2P29728 719 aaKnown RBP14.8□□□□□ -0.04
ITGB4-212ENST00000584558 MARCH10Q8NA82 808 aaPredicted RBP14.8□□□□□ -0.04
ITGB4-212ENST00000584558 GPATCH3Q96I76 525 aa14.8□□□□□ -0.04
ITGB4-212ENST00000584558 CCDC8Q9H0W5 538 aaPredicted RBP14.8□□□□□ -0.04
ITGB4-212ENST00000584558 CLSTN2Q9H4D0 955 aa14.8□□□□□ -0.04
ITGB4-212ENST00000584558 GEMIN8Q9NWZ8 242 aaKnown RBP14.8□□□□□ -0.04
ITGB4-212ENST00000584558 KIF2AO00139 706 aaPredicted RBP14.8□□□□□ -0.04
ITGB4-212ENST00000584558 DDB1Q16531 1140 aa14.8□□□□□ -0.04
ITGB4-212ENST00000584558 UBXN4Q92575 508 aa14.8□□□□□ -0.04
ITGB4-212ENST00000584558 TOMM22Q9NS69 142 aa14.8□□□□□ -0.04
ITGB4-212ENST00000584558 CWC15Q9P013 229 aaKnown RBP14.8□□□□□ -0.04
ITGB4-212ENST00000584558 MAP3K15Q6ZN16 1313 aa14.8□□□□□ -0.04
ITGB4-212ENST00000584558 CCDC34Q96HJ3 373 aa14.79□□□□□ -0.04
ITGB4-212ENST00000584558 GJD4Q96KN9 370 aaPredicted RBP14.79□□□□□ -0.04
ITGB4-212ENST00000584558 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.79□□□□□ -0.04
ITGB4-212ENST00000584558 ZRANB2O95218 330 aaKnown RBP eCLIP14.79□□□□□ -0.04
ITGB4-212ENST00000584558 ICE2Q659A1 982 aa14.79□□□□□ -0.04
ITGB4-212ENST00000584558 MRFAP1L1Q96HT8 127 aa14.79□□□□□ -0.04
ITGB4-212ENST00000584558 L2HGDHQ9H9P8 463 aa14.79□□□□□ -0.04
ITGB4-212ENST00000584558 BECN2A8MW95 431 aa14.79□□□□□ -0.04
ITGB4-212ENST00000584558 TFCP2Q12800 502 aa14.79□□□□□ -0.04
ITGB4-212ENST00000584558 ATG9AQ7Z3C6 839 aa14.79□□□□□ -0.04
ITGB4-212ENST00000584558 NUP98P52948 1817 aa14.79□□□□□ -0.04
ITGB4-212ENST00000584558 TNNI3KQ59H18 835 aa14.78□□□□□ -0.04
ITGB4-212ENST00000584558 C11orf57Q6ZUT1 292 aaPredicted RBP14.78□□□□□ -0.04
ITGB4-212ENST00000584558 EVI5LQ96CN4 794 aa14.78□□□□□ -0.04
ITGB4-212ENST00000584558 LSG1Q9H089 658 aaKnown RBP14.78□□□□□ -0.04
ITGB4-212ENST00000584558 FPGT-TNNI3KV9GXZ4 949 aa14.78□□□□□ -0.04
ITGB4-212ENST00000584558 KCNQ2O43526 872 aa14.78□□□□□ -0.04
ITGB4-212ENST00000584558 VPS72Q15906 364 aa14.78□□□□□ -0.04
ITGB4-212ENST00000584558 GIGYF2Q6Y7W6 1299 aaKnown RBP14.78□□□□□ -0.04
ITGB4-212ENST00000584558 KIF6Q6ZMV9 814 aa14.78□□□□□ -0.04
ITGB4-212ENST00000584558 ZBTB1Q9Y2K1 713 aa14.78□□□□□ -0.04
ITGB4-212ENST00000584558 ELP1O95163 1332 aa14.77□□□□□ -0.04
ITGB4-212ENST00000584558 JAKMIP1Q96N16 626 aaKnown RBP14.77□□□□□ -0.04
ITGB4-212ENST00000584558 PDRG1Q9NUG6 133 aa14.77□□□□□ -0.04
ITGB4-212ENST00000584558 DBNLQ9UJU6 430 aaKnown RBP14.77□□□□□ -0.04
ITGB4-212ENST00000584558 RRP15Q9Y3B9 282 aaKnown RBP14.77□□□□□ -0.04
ITGB4-212ENST00000584558 ZNF831Q5JPB2 1677 aa14.77□□□□□ -0.05
ITGB4-212ENST00000584558 A0A087WWV3 80 aa14.77□□□□□ -0.05
ITGB4-212ENST00000584558 LMAN1P49257 510 aa14.77□□□□□ -0.05
ITGB4-212ENST00000584558 HLFQ16534 295 aa14.77□□□□□ -0.05
ITGB4-212ENST00000584558 SRLQ86TD4 932 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms