RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 DDX46Q7L014 1031 aaKnown RBP7.01□□□□□ -1.29
VAPA-207ENST00000583879 COPS6Q7L5N1 327 aa7.01□□□□□ -1.29
VAPA-207ENST00000583879 USP48Q86UV5 1035 aa7.01□□□□□ -1.29
VAPA-207ENST00000583879 GRAPLQ8TC17 118 aaPredicted RBP7.01□□□□□ -1.29
VAPA-207ENST00000583879 DPF2Q92785 391 aa7.01□□□□□ -1.29
VAPA-207ENST00000583879 ZIC5Q96T25 663 aa7.01□□□□□ -1.29
VAPA-207ENST00000583879 TMUB1Q9BVT8 246 aa7.01□□□□□ -1.29
VAPA-207ENST00000583879 PNNQ9H307 717 aaKnown RBP7.01□□□□□ -1.29
VAPA-207ENST00000583879 LTBP1Q14766 1721 aa7.01□□□□□ -1.29
VAPA-207ENST00000583879 CACNA1SQ13698 1873 aa7□□□□□ -1.29
VAPA-207ENST00000583879 SHTN1A0MZ66 631 aa7□□□□□ -1.29
VAPA-207ENST00000583879 YDJCA8MPS7 323 aa7□□□□□ -1.29
VAPA-207ENST00000583879 HCLS1P14317 486 aaPredicted RBP7□□□□□ -1.29
VAPA-207ENST00000583879 HUNKP57058 714 aa7□□□□□ -1.29
VAPA-207ENST00000583879 AIMP1Q12904 312 aaKnown RBP7□□□□□ -1.29
VAPA-207ENST00000583879 WASHC4Q2M389 1173 aa7□□□□□ -1.29
VAPA-207ENST00000583879 RGMBQ6NW40 437 aa7□□□□□ -1.29
VAPA-207ENST00000583879 DLK2Q6UY11 383 aa7□□□□□ -1.29
VAPA-207ENST00000583879 TMC4Q7Z404 712 aa7□□□□□ -1.29
VAPA-207ENST00000583879 NLRP10Q86W26 655 aa7□□□□□ -1.29
VAPA-207ENST00000583879 SLF2Q8IX21 1173 aa7□□□□□ -1.29
VAPA-207ENST00000583879 C2orf69Q8N8R5 385 aa7□□□□□ -1.29
VAPA-207ENST00000583879 TRPM4Q8TD43 1214 aa7□□□□□ -1.29
VAPA-207ENST00000583879 CCDC102AQ96A19 550 aa7□□□□□ -1.29
VAPA-207ENST00000583879 BABAM1Q9NWV8 329 aa7□□□□□ -1.29
VAPA-207ENST00000583879 TRMT112Q9UI30 125 aaKnown RBP7□□□□□ -1.29
VAPA-207ENST00000583879 TSPYL4Q9UJ04 414 aa7□□□□□ -1.29
VAPA-207ENST00000583879 FAM155AB1AL88 458 aaPredicted RBP6.99□□□□□ -1.29
VAPA-207ENST00000583879 TULP1O00294 542 aaPredicted RBP6.99□□□□□ -1.29
VAPA-207ENST00000583879 ANXA1P04083 346 aa6.99□□□□□ -1.29
VAPA-207ENST00000583879 PROSER3Q2NL68 480 aa6.99□□□□□ -1.29
VAPA-207ENST00000583879 KRT26Q7Z3Y9 468 aa6.99□□□□□ -1.29
VAPA-207ENST00000583879 CDHR5Q9HBB8 845 aa6.99□□□□□ -1.29
VAPA-207ENST00000583879 NSFL1CQ9UNZ2 370 aaKnown RBP6.99□□□□□ -1.29
VAPA-207ENST00000583879 SH3TC1Q8TE82 1336 aa6.99□□□□□ -1.29
VAPA-207ENST00000583879 PSMD14O00487 310 aa6.98□□□□□ -1.29
VAPA-207ENST00000583879 EGFRP00533 1210 aa6.98□□□□□ -1.29
VAPA-207ENST00000583879 OSBPP22059 807 aa6.98□□□□□ -1.29
VAPA-207ENST00000583879 RPS12P25398 132 aaKnown RBP6.98□□□□□ -1.29
VAPA-207ENST00000583879 ZNF157P51786 506 aaPredicted RBP6.98□□□□□ -1.29
VAPA-207ENST00000583879 RIPK4P57078 832 aa6.98□□□□□ -1.29
VAPA-207ENST00000583879 KIF23Q02241 960 aaPredicted RBP6.98□□□□□ -1.29
VAPA-207ENST00000583879 SF3B3Q15393 1217 aaKnown RBP6.98□□□□□ -1.29
VAPA-207ENST00000583879 TBC1D10BQ4KMP7 808 aaPredicted RBP6.98□□□□□ -1.29
VAPA-207ENST00000583879 SWT1Q5T5J6 900 aaKnown RBP6.98□□□□□ -1.29
VAPA-207ENST00000583879 RBM26Q5T8P6 1007 aaKnown RBP6.98□□□□□ -1.29
VAPA-207ENST00000583879 XAGE3Q8WTP9 111 aa6.98□□□□□ -1.29
VAPA-207ENST00000583879 ZNF775Q96BV0 537 aaPredicted RBP6.98□□□□□ -1.29
VAPA-207ENST00000583879 DCPSQ96C86 337 aaKnown RBP6.98□□□□□ -1.29
VAPA-207ENST00000583879 DBNDD1Q9H9R9 158 aa6.98□□□□□ -1.29
VAPA-207ENST00000583879 GBA2Q9HCG7 927 aaPredicted RBP6.98□□□□□ -1.29
VAPA-207ENST00000583879 KCNQ5Q9NR82 932 aa6.98□□□□□ -1.29
VAPA-207ENST00000583879 SAGE1Q9NXZ1 904 aa6.98□□□□□ -1.29
VAPA-207ENST00000583879 MAPK8IP3Q9UPT6 1336 aa6.98□□□□□ -1.29
VAPA-207ENST00000583879 THSD7BQ9C0I4 1608 aa6.98□□□□□ -1.29
VAPA-207ENST00000583879 C6orf229H3BNL8 230 aa6.97□□□□□ -1.29
VAPA-207ENST00000583879 TRPA1O75762 1119 aa6.97□□□□□ -1.29
VAPA-207ENST00000583879 CELF1Q92879 486 aaKnown RBP6.97□□□□□ -1.29
VAPA-207ENST00000583879 FAM89AQ96GI7 184 aa6.97□□□□□ -1.29
VAPA-207ENST00000583879 CSRNP1Q96S65 589 aa6.97□□□□□ -1.29
VAPA-207ENST00000583879 PRR14Q9BWN1 585 aa6.97□□□□□ -1.29
VAPA-207ENST00000583879 ZC3H12CQ9C0D7 883 aaKnown RBP6.97□□□□□ -1.29
VAPA-207ENST00000583879 RNF186Q9NXI6 227 aa6.97□□□□□ -1.29
VAPA-207ENST00000583879 POLLQ9UGP5 575 aa6.97□□□□□ -1.29
VAPA-207ENST00000583879 ARIH1Q9Y4X5 557 aaPredicted RBP6.97□□□□□ -1.29
VAPA-207ENST00000583879 ADM5C9JUS6 153 aa6.96□□□□□ -1.3
VAPA-207ENST00000583879 ECE2O60344 883 aa6.96□□□□□ -1.3
VAPA-207ENST00000583879 VIL1P09327 827 aaKnown RBP6.96□□□□□ -1.3
VAPA-207ENST00000583879 RPS8P62241 208 aaKnown RBP6.96□□□□□ -1.3
VAPA-207ENST00000583879 GPSM2P81274 684 aa6.96□□□□□ -1.3
VAPA-207ENST00000583879 SULF1Q8IWU6 871 aa6.96□□□□□ -1.3
VAPA-207ENST00000583879 PLBD2Q8NHP8 589 aa6.96□□□□□ -1.3
VAPA-207ENST00000583879 TBC1D16Q8TBP0 767 aa6.96□□□□□ -1.3
VAPA-207ENST00000583879 ZNF428Q96B54 188 aa6.96□□□□□ -1.3
VAPA-207ENST00000583879 EYA3Q99504 573 aa6.96□□□□□ -1.3
VAPA-207ENST00000583879 ISCA1Q9BUE6 129 aa6.96□□□□□ -1.3
VAPA-207ENST00000583879 ATP5J2-PTCD1G3V325 749 aa6.95□□□□□ -1.3
VAPA-207ENST00000583879 CHL1O00533 1208 aa6.95□□□□□ -1.3
VAPA-207ENST00000583879 SLC10A3P09131 477 aa6.95□□□□□ -1.3
VAPA-207ENST00000583879 SLC19A1P41440 591 aa6.95□□□□□ -1.3
VAPA-207ENST00000583879 TMPOP42166 694 aaKnown RBP6.95□□□□□ -1.3
VAPA-207ENST00000583879 SOX10P56693 466 aa6.95□□□□□ -1.3
VAPA-207ENST00000583879 LMOD3Q0VAK6 560 aa6.95□□□□□ -1.3
VAPA-207ENST00000583879 TRIM28Q13263 835 aaKnown RBP6.95□□□□□ -1.3
VAPA-207ENST00000583879 KIF4BQ2VIQ3 1234 aa6.95□□□□□ -1.3
VAPA-207ENST00000583879 PKDCCQ504Y2 493 aa6.95□□□□□ -1.3
VAPA-207ENST00000583879 PADI6Q6TGC4 694 aa6.95□□□□□ -1.3
VAPA-207ENST00000583879 PODXL2Q9NZ53 605 aa6.95□□□□□ -1.3
VAPA-207ENST00000583879 PCDHB3Q9Y5E6 796 aa6.95□□□□□ -1.3
VAPA-207ENST00000583879 RTL9Q8NET4 1388 aa6.95□□□□□ -1.3
VAPA-207ENST00000583879 NUP98P52948 1817 aa6.94□□□□□ -1.3
VAPA-207ENST00000583879 IRS4O14654 1257 aaPredicted RBP6.94□□□□□ -1.3
VAPA-207ENST00000583879 FKBP1BP68106 108 aa6.94□□□□□ -1.3
VAPA-207ENST00000583879 SCARF1Q14162 830 aa6.94□□□□□ -1.3
VAPA-207ENST00000583879 NEUROD2Q15784 382 aa6.94□□□□□ -1.3
VAPA-207ENST00000583879 KRT24Q2M2I5 525 aa6.94□□□□□ -1.3
VAPA-207ENST00000583879 RTL5Q5HYW3 569 aaPredicted RBP6.94□□□□□ -1.3
VAPA-207ENST00000583879 CTU1Q7Z7A3 348 aaKnown RBP6.94□□□□□ -1.3
VAPA-207ENST00000583879 TTC13Q8NBP0 860 aa6.94□□□□□ -1.3
VAPA-207ENST00000583879 AGBL3Q8NEM8 1001 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms